RNA–Protein interactions for RNA: ENST00000431020.1

LINC00309-201, long intergenic non-protein coding RNA 309, humanhuman

TSL 1 (best) BASIC

Gene LINC00309, Length 3,307 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00309-201ENST00000431020 TNXBP22105 4242 aa3.35□□□□□ -1.87
LINC00309-201ENST00000431020 HMCN2Q8NDA2 5059 aa3.35□□□□□ -1.87
LINC00309-201ENST00000431020 CASC2Q6XLA1 102 aa3.35□□□□□ -1.87
LINC00309-201ENST00000431020 FSIP2Q5CZC0 6907 aa3.35□□□□□ -1.87
LINC00309-201ENST00000431020 LOC101927531A0A1B0GV80 90 aa3.34□□□□□ -1.87
LINC00309-201ENST00000431020 NREPQ16612 68 aa3.34□□□□□ -1.87
LINC00309-201ENST00000431020 Q8N9L7 120 aa3.34□□□□□ -1.87
LINC00309-201ENST00000431020 SPRR1BP22528 89 aa3.34□□□□□ -1.88
LINC00309-201ENST00000431020 Q96NJ1 140 aa3.34□□□□□ -1.88
LINC00309-201ENST00000431020 DSCR10P59022 87 aa3.33□□□□□ -1.88
LINC00309-201ENST00000431020 MIR22HGQ0VDD5 57 aa3.33□□□□□ -1.88
LINC00309-201ENST00000431020 FAT4Q6V0I7 4981 aa3.32□□□□□ -1.88
LINC00309-201ENST00000431020 Q6ZQT0 140 aa3.32□□□□□ -1.88
LINC00309-201ENST00000431020 KRTAP19-1Q8IUB9 90 aa3.31□□□□□ -1.88
LINC00309-201ENST00000431020 JMJD7-PLA2G4BH0Y9G9 81 aa3.31□□□□□ -1.88
LINC00309-201ENST00000431020 WFDC13Q8IUB5 93 aa3.3□□□□□ -1.88
LINC00309-201ENST00000431020 IGLV8-61A0A075B6I0 122 aa3.3□□□□□ -1.88
LINC00309-201ENST00000431020 A0A1B0GW54 56 aa3.3□□□□□ -1.88
LINC00309-201ENST00000431020 PCOTHQ58A44 107 aa3.29□□□□□ -1.88
LINC00309-201ENST00000431020 SPINK7P58062 85 aa3.28□□□□□ -1.88
LINC00309-201ENST00000431020 BPY2O14599 106 aa3.27□□□□□ -1.89
LINC00309-201ENST00000431020 OCR1Q9BZK8 76 aa3.27□□□□□ -1.89
LINC00309-201ENST00000431020 NDUFB1O75438 58 aa3.27□□□□□ -1.89
LINC00309-201ENST00000431020 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
LINC00309-201ENST00000431020 C20orf166-AS1Q96NR2 134 aa3.27□□□□□ -1.89
LINC00309-201ENST00000431020 UBL5Q9BZL1 73 aa3.27□□□□□ -1.89
LINC00309-201ENST00000431020 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
LINC00309-201ENST00000431020 KRTAP13-3Q3SY46 172 aa3.25□□□□□ -1.89
LINC00309-201ENST00000431020 K7EQZ3 153 aa3.25□□□□□ -1.89
LINC00309-201ENST00000431020 COX6B2Q6YFQ2 88 aa3.24□□□□□ -1.89
LINC00309-201ENST00000431020 ZCCHC13Q8WW36 166 aaKnown RBP3.24□□□□□ -1.89
LINC00309-201ENST00000431020 H3BQ85 93 aa3.23□□□□□ -1.89
LINC00309-201ENST00000431020 A8MUU9 505 aa3.23□□□□□ -1.89
LINC00309-201ENST00000431020 TPRXLQ17RH7 258 aa3.22□□□□□ -1.89
LINC00309-201ENST00000431020 PDE6GP18545 87 aa3.22□□□□□ -1.89
LINC00309-201ENST00000431020 LINC00472Q9H8W2 130 aa3.22□□□□□ -1.89
LINC00309-201ENST00000431020 KRTAP19-4Q3LI73 84 aa3.21□□□□□ -1.9
LINC00309-201ENST00000431020 LINC00208Q96KT6 92 aa3.21□□□□□ -1.9
LINC00309-201ENST00000431020 LOC110117498A0A087WWA1 95 aa3.21□□□□□ -1.9
LINC00309-201ENST00000431020 IGKV2D-30A0A075B6S6 120 aa3.2□□□□□ -1.9
LINC00309-201ENST00000431020 A0A1B0GVX0 72 aa3.2□□□□□ -1.9
LINC00309-201ENST00000431020 K7ERS5 55 aa3.2□□□□□ -1.9
LINC00309-201ENST00000431020 M0R2T5 61 aa3.2□□□□□ -1.9
LINC00309-201ENST00000431020 IGKV2-30P06310 120 aa3.2□□□□□ -1.9
LINC00309-201ENST00000431020 LINC01558Q9Y6Z2 57 aa3.2□□□□□ -1.9
LINC00309-201ENST00000431020 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
LINC00309-201ENST00000431020 RPS29P62273 56 aaKnown RBP3.19□□□□□ -1.9
LINC00309-201ENST00000431020 KRTAP25-1Q3LHN0 102 aa3.18□□□□□ -1.9
LINC00309-201ENST00000431020 KRTAP4-1Q9BYQ7 146 aa3.18□□□□□ -1.9
LINC00309-201ENST00000431020 RPL37P61927 97 aaKnown RBP3.15□□□□□ -1.9
LINC00309-201ENST00000431020 MRPL34Q9BQ48 92 aaKnown RBP3.14□□□□□ -1.91
LINC00309-201ENST00000431020 MMP24-AS1A0A0U1RRL7 71 aa3.13□□□□□ -1.91
LINC00309-201ENST00000431020 H0Y9P7 68 aa3.12□□□□□ -1.91
LINC00309-201ENST00000431020 COA5Q86WW8 74 aa3.12□□□□□ -1.91
LINC00309-201ENST00000431020 SPANXA2-OT1Q8N9U9 137 aa3.11□□□□□ -1.91
LINC00309-201ENST00000431020 Q5W150 140 aa3.11□□□□□ -1.91
LINC00309-201ENST00000431020 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
LINC00309-201ENST00000431020 KRTAP15-1Q3LI76 137 aa3.1□□□□□ -1.91
LINC00309-201ENST00000431020 H3BPC8 53 aa3.09□□□□□ -1.91
LINC00309-201ENST00000431020 SPATA8Q6RVD6 105 aa3.08□□□□□ -1.92
LINC00309-201ENST00000431020 CAMK2N1Q7Z7J9 78 aa3.07□□□□□ -1.92
LINC00309-201ENST00000431020 DMAC1Q96GE9 116 aa3.04□□□□□ -1.92
LINC00309-201ENST00000431020 SPINT4Q6UDR6 99 aa3.03□□□□□ -1.92
LINC00309-201ENST00000431020 UQCR11O14957 56 aa3.01□□□□□ -1.93
LINC00309-201ENST00000431020 USH2AO75445 5202 aa3□□□□□ -1.93
LINC00309-201ENST00000431020 MUC17Q685J3 4493 aa3□□□□□ -1.93
LINC00309-201ENST00000431020 HRES1P13985 223 aa2.97□□□□□ -1.93
LINC00309-201ENST00000431020 MT1HP80294 61 aa2.97□□□□□ -1.93
LINC00309-201ENST00000431020 TP53AIP1Q9HCN2 124 aa2.97□□□□□ -1.93
LINC00309-201ENST00000431020 A0A1B0GU69 56 aa2.96□□□□□ -1.94
LINC00309-201ENST00000431020 A0A1B0GU33 70 aa2.94□□□□□ -1.94
LINC00309-201ENST00000431020 CRIPTQ9P021 101 aa2.94□□□□□ -1.94
LINC00309-201ENST00000431020 KRTAP10-10P60014 251 aa2.93□□□□□ -1.94
LINC00309-201ENST00000431020 KRTAP19-2Q3LHN2 52 aa2.93□□□□□ -1.94
LINC00309-201ENST00000431020 H1FX-AS1Q4G0G2 97 aa2.91□□□□□ -1.94
LINC00309-201ENST00000431020 S4R3F8 94 aa2.9□□□□□ -1.95
LINC00309-201ENST00000431020 KRTAP10-6P60371 365 aaPredicted RBP2.88□□□□□ -1.95
LINC00309-201ENST00000431020 LCE5AQ5TCM9 118 aa2.87□□□□□ -1.95
LINC00309-201ENST00000431020 FLGP20930 4061 aaPredicted RBP2.86□□□□□ -1.95
LINC00309-201ENST00000431020 R4GN34 69 aa2.84□□□□□ -1.95
LINC00309-201ENST00000431020 MT1FP04733 61 aa2.82□□□□□ -1.96
LINC00309-201ENST00000431020 PRO2289Q9P1D8 64 aa2.81□□□□□ -1.96
LINC00309-201ENST00000431020 KRTAP9-7A8MTY7 169 aa2.81□□□□□ -1.96
LINC00309-201ENST00000431020 MT2AP02795 61 aa2.81□□□□□ -1.96
LINC00309-201ENST00000431020 ACYP2P14621 99 aa2.81□□□□□ -1.96
LINC00309-201ENST00000431020 H0YAA0 97 aa2.75□□□□□ -1.97
LINC00309-201ENST00000431020 SSPOA2VEC9 5147 aa2.75□□□□□ -1.97
LINC00309-201ENST00000431020 M0QZ58 72 aa2.74□□□□□ -1.97
LINC00309-201ENST00000431020 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
LINC00309-201ENST00000431020 A0A0D9SG42 100 aa2.74□□□□□ -1.97
LINC00309-201ENST00000431020 SYNE2Q8WXH0 6885 aaKnown RBP2.73□□□□□ -1.97
LINC00309-201ENST00000431020 C10orf95Q9H7T3 257 aa2.73□□□□□ -1.97
LINC00309-201ENST00000431020 CRCT1Q9UGL9 99 aa2.71□□□□□ -1.97
LINC00309-201ENST00000431020 KRTAP9-3Q9BYQ3 159 aa2.71□□□□□ -1.98
LINC00309-201ENST00000431020 MACF1Q9UPN3 7388 aaKnown RBP2.69□□□□□ -1.98
LINC00309-201ENST00000431020 KMT2DO14686 5537 aa2.67□□□□□ -1.98
LINC00309-201ENST00000431020 FCGBPQ9Y6R7 5405 aaPredicted RBP2.67□□□□□ -1.98
LINC00309-201ENST00000431020 LCE4AQ5TA78 99 aa2.65□□□□□ -1.98
LINC00309-201ENST00000431020 PLAC4Q8WY50 150 aa2.63□□□□□ -1.99
LINC00309-201ENST00000431020 LCE1AQ5T7P2 110 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms