RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 RYR1P21817 5038 aa7.64□□□□□ -1.19
SMARCA4-203ENST00000429416 KRTAP3-3Q9BYR6 98 aa7.64□□□□□ -1.19
SMARCA4-203ENST00000429416 PRKDCP78527 4128 aaKnown RBP7.64□□□□□ -1.19
SMARCA4-203ENST00000429416 DYNC1H1Q14204 4646 aaKnown RBP7.63□□□□□ -1.19
SMARCA4-203ENST00000429416 STARD9Q9P2P6 4700 aa7.59□□□□□ -1.19
SMARCA4-203ENST00000429416 FAT1Q14517 4588 aa7.58□□□□□ -1.2
SMARCA4-203ENST00000429416 KRTAP15-1Q3LI76 137 aa7.58□□□□□ -1.2
SMARCA4-203ENST00000429416 VPS13DQ5THJ4 4388 aa7.58□□□□□ -1.2
SMARCA4-203ENST00000429416 LRP1BQ9NZR2 4599 aa7.57□□□□□ -1.2
SMARCA4-203ENST00000429416 DNAH10Q8IVF4 4471 aa7.55□□□□□ -1.2
SMARCA4-203ENST00000429416 KRTAP3-2Q9BYR7 98 aa7.52□□□□□ -1.2
SMARCA4-203ENST00000429416 KRTAP10-12P60413 245 aa7.51□□□□□ -1.21
SMARCA4-203ENST00000429416 KRTAP4-1Q9BYQ7 146 aa7.5□□□□□ -1.21
SMARCA4-203ENST00000429416 ANK2Q01484 3957 aa7.48□□□□□ -1.21
SMARCA4-203ENST00000429416 CRCT1Q9UGL9 99 aa7.44□□□□□ -1.22
SMARCA4-203ENST00000429416 DNAH17Q9UFH2 4485 aa7.42□□□□□ -1.22
SMARCA4-203ENST00000429416 MT1HP80294 61 aa7.42□□□□□ -1.22
SMARCA4-203ENST00000429416 LORP23490 312 aaPredicted RBP7.4□□□□□ -1.22
SMARCA4-203ENST00000429416 KIAA1109Q2LD37 5005 aa7.39□□□□□ -1.23
SMARCA4-203ENST00000429416 FAT2Q9NYQ8 4349 aa7.38□□□□□ -1.23
SMARCA4-203ENST00000429416 RYR3Q15413 4870 aa7.35□□□□□ -1.23
SMARCA4-203ENST00000429416 SACSQ9NZJ4 4579 aa7.34□□□□□ -1.23
SMARCA4-203ENST00000429416 DNAH2Q9P225 4427 aa7.29□□□□□ -1.24
SMARCA4-203ENST00000429416 KMT2AQ03164 3969 aa7.29□□□□□ -1.24
SMARCA4-203ENST00000429416 DYNC2H1Q8NCM8 4307 aaKnown RBP7.26□□□□□ -1.25
SMARCA4-203ENST00000429416 KRTAP8-1Q8IUC2 63 aa7.26□□□□□ -1.25
SMARCA4-203ENST00000429416 LYSTQ99698 3801 aa7.25□□□□□ -1.25
SMARCA4-203ENST00000429416 KRTAP17-1Q9BYP8 105 aa7.25□□□□□ -1.25
SMARCA4-203ENST00000429416 VPS13BQ7Z7G8 4022 aa7.22□□□□□ -1.25
SMARCA4-203ENST00000429416 MT2AP02795 61 aa7.22□□□□□ -1.25
SMARCA4-203ENST00000429416 KRTAP12-3P60328 96 aa7.19□□□□□ -1.26
SMARCA4-203ENST00000429416 DNAH8Q96JB1 4490 aa7.16□□□□□ -1.26
SMARCA4-203ENST00000429416 LCE3AQ5TA76 89 aa7.14□□□□□ -1.27
SMARCA4-203ENST00000429416 DNAH3Q8TD57 4116 aa7.13□□□□□ -1.27
SMARCA4-203ENST00000429416 APOBP04114 4563 aaKnown RBP7.09□□□□□ -1.27
SMARCA4-203ENST00000429416 MT1FP04733 61 aa7.08□□□□□ -1.28
SMARCA4-203ENST00000429416 HERC2O95714 4834 aa7.05□□□□□ -1.28
SMARCA4-203ENST00000429416 BIRC6Q9NR09 4857 aa7.05□□□□□ -1.28
SMARCA4-203ENST00000429416 RYR2Q92736 4967 aa7.03□□□□□ -1.28
SMARCA4-203ENST00000429416 MYCBP2O75592 4640 aa7.02□□□□□ -1.29
SMARCA4-203ENST00000429416 CMYA5Q8N3K9 4069 aa6.99□□□□□ -1.29
SMARCA4-203ENST00000429416 LRP1Q07954 4544 aaKnown RBP6.96□□□□□ -1.3
SMARCA4-203ENST00000429416 FAT3Q8TDW7 4589 aa6.95□□□□□ -1.3
SMARCA4-203ENST00000429416 SPRR2GQ9BYE4 73 aa6.93□□□□□ -1.3
SMARCA4-203ENST00000429416 SPRR2FQ96RM1 72 aa6.9□□□□□ -1.31
SMARCA4-203ENST00000429416 DNAH6Q9C0G6 4158 aa6.89□□□□□ -1.31
SMARCA4-203ENST00000429416 HYDINQ4G0P3 5121 aa6.82□□□□□ -1.32
SMARCA4-203ENST00000429416 KRTAP23-1A1A580 65 aa6.81□□□□□ -1.32
SMARCA4-203ENST00000429416 PCLOQ9Y6V0 5065 aa6.78□□□□□ -1.32
SMARCA4-203ENST00000429416 HSPG2P98160 4391 aa6.76□□□□□ -1.33
SMARCA4-203ENST00000429416 DNAH7Q8WXX0 4024 aa6.74□□□□□ -1.33
SMARCA4-203ENST00000429416 KMT2CQ8NEZ4 4911 aaKnown RBP6.67□□□□□ -1.34
SMARCA4-203ENST00000429416 PKHD1P08F94 4074 aa6.66□□□□□ -1.34
SMARCA4-203ENST00000429416 FRAS1Q86XX4 4008 aa6.65□□□□□ -1.34
SMARCA4-203ENST00000429416 LRP2P98164 4655 aa6.64□□□□□ -1.35
SMARCA4-203ENST00000429416 HECTD4Q9Y4D8 3996 aa6.62□□□□□ -1.35
SMARCA4-203ENST00000429416 HERC1Q15751 4861 aa6.61□□□□□ -1.35
SMARCA4-203ENST00000429416 KRTAP10-7P60409 375 aaPredicted RBP6.59□□□□□ -1.35
SMARCA4-203ENST00000429416 KRTAP10-5P60370 271 aa6.58□□□□□ -1.36
SMARCA4-203ENST00000429416 KRTAP19-5Q3LI72 72 aa6.57□□□□□ -1.36
SMARCA4-203ENST00000429416 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
SMARCA4-203ENST00000429416 KRTAP9-8Q9BYQ0 159 aa6.53□□□□□ -1.36
SMARCA4-203ENST00000429416 SPRR2EP22531 72 aa6.52□□□□□ -1.37
SMARCA4-203ENST00000429416 SPRR2BP35325 72 aa6.52□□□□□ -1.37
SMARCA4-203ENST00000429416 SPRR2AP35326 72 aa6.52□□□□□ -1.37
SMARCA4-203ENST00000429416 PKD1P98161 4303 aa6.52□□□□□ -1.37
SMARCA4-203ENST00000429416 LCE2CQ5TA81 110 aa6.5□□□□□ -1.37
SMARCA4-203ENST00000429416 KRTAP19-8Q3LI54 63 aa6.5□□□□□ -1.37
SMARCA4-203ENST00000429416 EPPK1P58107 5090 aaKnown RBP6.49□□□□□ -1.37
SMARCA4-203ENST00000429416 PKHD1L1Q86WI1 4243 aa6.45□□□□□ -1.38
SMARCA4-203ENST00000429416 LPAP08519 4548 aa6.44□□□□□ -1.38
SMARCA4-203ENST00000429416 MT1BP07438 61 aa6.37□□□□□ -1.39
SMARCA4-203ENST00000429416 KRTAP9-3Q9BYQ3 159 aa6.37□□□□□ -1.39
SMARCA4-203ENST00000429416 ABCA13Q86UQ4 5058 aa6.37□□□□□ -1.39
SMARCA4-203ENST00000429416 MT1XP80297 61 aa6.33□□□□□ -1.4
SMARCA4-203ENST00000429416 SPRR2DP22532 72 aa6.3□□□□□ -1.4
SMARCA4-203ENST00000429416 INE1O15225 51 aa6.3□□□□□ -1.4
SMARCA4-203ENST00000429416 KRTAP9-2Q9BYQ4 174 aa6.27□□□□□ -1.41
SMARCA4-203ENST00000429416 LCE3CQ5T5A8 94 aa6.26□□□□□ -1.41
SMARCA4-203ENST00000429416 FSIP2Q5CZC0 6907 aa6.23□□□□□ -1.41
SMARCA4-203ENST00000429416 KRTAP4-8A0A0G2JLE6 195 aa6.23□□□□□ -1.41
SMARCA4-203ENST00000429416 KRTAP4-8Q9BYQ9 185 aa6.23□□□□□ -1.41
SMARCA4-203ENST00000429416 LCE2BO14633 110 aa6.21□□□□□ -1.41
SMARCA4-203ENST00000429416 UBR4Q5T4S7 5183 aa6.19□□□□□ -1.42
SMARCA4-203ENST00000429416 KRTAP19-2Q3LHN2 52 aa6.18□□□□□ -1.42
SMARCA4-203ENST00000429416 TNXBP22105 4242 aa6.1□□□□□ -1.43
SMARCA4-203ENST00000429416 KRTAP19-4Q3LI73 84 aa6.06□□□□□ -1.44
SMARCA4-203ENST00000429416 MT1GP13640 62 aa6.02□□□□□ -1.45
SMARCA4-203ENST00000429416 RNF213Q63HN8 5207 aa6.01□□□□□ -1.45
SMARCA4-203ENST00000429416 FAT4Q6V0I7 4981 aa5.99□□□□□ -1.45
SMARCA4-203ENST00000429416 KRTAP9-6A0A140TA67 174 aa5.99□□□□□ -1.45
SMARCA4-203ENST00000429416 LCE2AQ5TA79 106 aaPredicted RBP5.97□□□□□ -1.45
SMARCA4-203ENST00000429416 KRTAP12-4P60329 112 aa5.95□□□□□ -1.46
SMARCA4-203ENST00000429416 MUC17Q685J3 4493 aa5.94□□□□□ -1.46
SMARCA4-203ENST00000429416 LCE3BQ5TA77 95 aa5.91□□□□□ -1.46
SMARCA4-203ENST00000429416 FLGP20930 4061 aaPredicted RBP5.91□□□□□ -1.46
SMARCA4-203ENST00000429416 LCE2DQ5TA82 110 aaPredicted RBP5.9□□□□□ -1.47
SMARCA4-203ENST00000429416 KRTAP19-6Q3LI70 58 aa5.89□□□□□ -1.47
SMARCA4-203ENST00000429416 KRTAP19-3Q7Z4W3 81 aa5.84□□□□□ -1.47
SMARCA4-203ENST00000429416 HMCN2Q8NDA2 5059 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms