RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 DNAH9Q9NYC9 4486 aa4.49□□□□□ -1.69
CLTCL1-202ENST00000427926 DYNC2H1Q8NCM8 4307 aaKnown RBP4.46□□□□□ -1.69
CLTCL1-202ENST00000427926 KRTAP10-4P60372 401 aaPredicted RBP4.46□□□□□ -1.7
CLTCL1-202ENST00000427926 DNAH7Q8WXX0 4024 aa4.41□□□□□ -1.7
CLTCL1-202ENST00000427926 DNAH6Q9C0G6 4158 aa4.4□□□□□ -1.71
CLTCL1-202ENST00000427926 LORP23490 312 aaPredicted RBP4.39□□□□□ -1.71
CLTCL1-202ENST00000427926 KRTAP3-2Q9BYR7 98 aa4.39□□□□□ -1.71
CLTCL1-202ENST00000427926 KRTAP3-3Q9BYR6 98 aa4.38□□□□□ -1.71
CLTCL1-202ENST00000427926 KRTAP8-1Q8IUC2 63 aa4.38□□□□□ -1.71
CLTCL1-202ENST00000427926 DNHD1Q96M86 4753 aa4.37□□□□□ -1.71
CLTCL1-202ENST00000427926 KRTAP12-3P60328 96 aa4.33□□□□□ -1.72
CLTCL1-202ENST00000427926 DNAH1Q9P2D7 4330 aa4.33□□□□□ -1.72
CLTCL1-202ENST00000427926 PRKDCP78527 4128 aaKnown RBP4.32□□□□□ -1.72
CLTCL1-202ENST00000427926 DNAH5Q8TE73 4624 aa4.27□□□□□ -1.73
CLTCL1-202ENST00000427926 VPS13DQ5THJ4 4388 aa4.27□□□□□ -1.73
CLTCL1-202ENST00000427926 PLECQ15149 4684 aaKnown RBP4.25□□□□□ -1.73
CLTCL1-202ENST00000427926 CSMD3Q7Z407 3707 aa4.25□□□□□ -1.73
CLTCL1-202ENST00000427926 STARD9Q9P2P6 4700 aa4.25□□□□□ -1.73
CLTCL1-202ENST00000427926 LYSTQ99698 3801 aa4.23□□□□□ -1.73
CLTCL1-202ENST00000427926 LCE3AQ5TA76 89 aa4.22□□□□□ -1.73
CLTCL1-202ENST00000427926 FRAS1Q86XX4 4008 aa4.2□□□□□ -1.74
CLTCL1-202ENST00000427926 DNAH2Q9P225 4427 aa4.19□□□□□ -1.74
CLTCL1-202ENST00000427926 DNAH11Q96DT5 4516 aa4.18□□□□□ -1.74
CLTCL1-202ENST00000427926 DNAH17Q9UFH2 4485 aa4.18□□□□□ -1.74
CLTCL1-202ENST00000427926 KRTAP10-5P60370 271 aa4.16□□□□□ -1.74
CLTCL1-202ENST00000427926 DNAH10Q8IVF4 4471 aa4.16□□□□□ -1.74
CLTCL1-202ENST00000427926 DNAH8Q96JB1 4490 aa4.12□□□□□ -1.75
CLTCL1-202ENST00000427926 SACSQ9NZJ4 4579 aa4.12□□□□□ -1.75
CLTCL1-202ENST00000427926 KMT2AQ03164 3969 aa4.11□□□□□ -1.75
CLTCL1-202ENST00000427926 MT1HP80294 61 aa4.11□□□□□ -1.75
CLTCL1-202ENST00000427926 SPRR2FQ96RM1 72 aa4.1□□□□□ -1.75
CLTCL1-202ENST00000427926 DYNC1H1Q14204 4646 aaKnown RBP4.08□□□□□ -1.76
CLTCL1-202ENST00000427926 FAT2Q9NYQ8 4349 aa4.08□□□□□ -1.76
CLTCL1-202ENST00000427926 HECTD4Q9Y4D8 3996 aa4.06□□□□□ -1.76
CLTCL1-202ENST00000427926 KRTAP10-7P60409 375 aaPredicted RBP4.06□□□□□ -1.76
CLTCL1-202ENST00000427926 HYDINQ4G0P3 5121 aa4.05□□□□□ -1.76
CLTCL1-202ENST00000427926 RYR2Q92736 4967 aa4.05□□□□□ -1.76
CLTCL1-202ENST00000427926 LRP1BQ9NZR2 4599 aa4.04□□□□□ -1.76
CLTCL1-202ENST00000427926 PKD1P98161 4303 aa4.03□□□□□ -1.76
CLTCL1-202ENST00000427926 KRTAP4-1Q9BYQ7 146 aa4.03□□□□□ -1.76
CLTCL1-202ENST00000427926 PKHD1L1Q86WI1 4243 aa4.02□□□□□ -1.77
CLTCL1-202ENST00000427926 MT2AP02795 61 aa4□□□□□ -1.77
CLTCL1-202ENST00000427926 FAT1Q14517 4588 aa4□□□□□ -1.77
CLTCL1-202ENST00000427926 RYR1P21817 5038 aa3.99□□□□□ -1.77
CLTCL1-202ENST00000427926 VPS13BQ7Z7G8 4022 aa3.92□□□□□ -1.78
CLTCL1-202ENST00000427926 SPRR2EP22531 72 aa3.91□□□□□ -1.78
CLTCL1-202ENST00000427926 SPRR2BP35325 72 aa3.91□□□□□ -1.78
CLTCL1-202ENST00000427926 SPRR2AP35326 72 aa3.91□□□□□ -1.78
CLTCL1-202ENST00000427926 APOBP04114 4563 aaKnown RBP3.91□□□□□ -1.78
CLTCL1-202ENST00000427926 MT1FP04733 61 aa3.89□□□□□ -1.79
CLTCL1-202ENST00000427926 RYR3Q15413 4870 aa3.88□□□□□ -1.79
CLTCL1-202ENST00000427926 BIRC6Q9NR09 4857 aa3.87□□□□□ -1.79
CLTCL1-202ENST00000427926 SPRR2GQ9BYE4 73 aa3.87□□□□□ -1.79
CLTCL1-202ENST00000427926 KMT2CQ8NEZ4 4911 aaKnown RBP3.86□□□□□ -1.79
CLTCL1-202ENST00000427926 PKHD1P08F94 4074 aa3.85□□□□□ -1.79
CLTCL1-202ENST00000427926 HSPG2P98160 4391 aa3.84□□□□□ -1.79
CLTCL1-202ENST00000427926 KRTAP17-1Q9BYP8 105 aa3.83□□□□□ -1.8
CLTCL1-202ENST00000427926 KRTAP19-5Q3LI72 72 aa3.82□□□□□ -1.8
CLTCL1-202ENST00000427926 SPRR2DP22532 72 aa3.8□□□□□ -1.8
CLTCL1-202ENST00000427926 KIAA1109Q2LD37 5005 aa3.8□□□□□ -1.8
CLTCL1-202ENST00000427926 KRTAP9-6A0A140TA67 174 aa3.75□□□□□ -1.81
CLTCL1-202ENST00000427926 EPPK1P58107 5090 aaKnown RBP3.72□□□□□ -1.81
CLTCL1-202ENST00000427926 MYCBP2O75592 4640 aa3.72□□□□□ -1.81
CLTCL1-202ENST00000427926 LCE2BO14633 110 aa3.72□□□□□ -1.81
CLTCL1-202ENST00000427926 FAT3Q8TDW7 4589 aa3.71□□□□□ -1.82
CLTCL1-202ENST00000427926 TNXBP22105 4242 aa3.71□□□□□ -1.82
CLTCL1-202ENST00000427926 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
CLTCL1-202ENST00000427926 KRTAP19-4Q3LI73 84 aa3.69□□□□□ -1.82
CLTCL1-202ENST00000427926 KRTAP12-4P60329 112 aa3.67□□□□□ -1.82
CLTCL1-202ENST00000427926 LRP1Q07954 4544 aaKnown RBP3.67□□□□□ -1.82
CLTCL1-202ENST00000427926 HERC1Q15751 4861 aa3.66□□□□□ -1.82
CLTCL1-202ENST00000427926 HERC2O95714 4834 aa3.66□□□□□ -1.82
CLTCL1-202ENST00000427926 KRTAP9-2Q9BYQ4 174 aa3.65□□□□□ -1.82
CLTCL1-202ENST00000427926 KRTAP19-8Q3LI54 63 aa3.61□□□□□ -1.83
CLTCL1-202ENST00000427926 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
CLTCL1-202ENST00000427926 LCE3BQ5TA77 95 aa3.58□□□□□ -1.84
CLTCL1-202ENST00000427926 KRTAP19-1Q8IUB9 90 aa3.58□□□□□ -1.84
CLTCL1-202ENST00000427926 MUC17Q685J3 4493 aa3.57□□□□□ -1.84
CLTCL1-202ENST00000427926 MT1GP13640 62 aa3.53□□□□□ -1.84
CLTCL1-202ENST00000427926 LCE2CQ5TA81 110 aa3.52□□□□□ -1.85
CLTCL1-202ENST00000427926 PCLOQ9Y6V0 5065 aa3.52□□□□□ -1.85
CLTCL1-202ENST00000427926 ABCA13Q86UQ4 5058 aa3.5□□□□□ -1.85
CLTCL1-202ENST00000427926 MT3P25713 68 aa3.5□□□□□ -1.85
CLTCL1-202ENST00000427926 LRP2P98164 4655 aa3.49□□□□□ -1.85
CLTCL1-202ENST00000427926 KRTAP9-8Q9BYQ0 159 aa3.49□□□□□ -1.85
CLTCL1-202ENST00000427926 LCE2DQ5TA82 110 aaPredicted RBP3.49□□□□□ -1.85
CLTCL1-202ENST00000427926 MT1XP80297 61 aa3.48□□□□□ -1.85
CLTCL1-202ENST00000427926 MT1BP07438 61 aa3.47□□□□□ -1.85
CLTCL1-202ENST00000427926 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.86
CLTCL1-202ENST00000427926 KRTAP9-7A8MTY7 169 aa3.43□□□□□ -1.86
CLTCL1-202ENST00000427926 KRTAP4-8A0A0G2JLE6 195 aa3.41□□□□□ -1.86
CLTCL1-202ENST00000427926 KRTAP4-8Q9BYQ9 185 aa3.41□□□□□ -1.86
CLTCL1-202ENST00000427926 KRTAP9-3Q9BYQ3 159 aa3.41□□□□□ -1.86
CLTCL1-202ENST00000427926 LPAP08519 4548 aa3.4□□□□□ -1.87
CLTCL1-202ENST00000427926 MT4P47944 62 aa3.36□□□□□ -1.87
CLTCL1-202ENST00000427926 KRTAP19-3Q7Z4W3 81 aa3.34□□□□□ -1.87
CLTCL1-202ENST00000427926 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
CLTCL1-202ENST00000427926 KRTAP19-2Q3LHN2 52 aa3.32□□□□□ -1.88
CLTCL1-202ENST00000427926 LCE2AQ5TA79 106 aaPredicted RBP3.31□□□□□ -1.88
CLTCL1-202ENST00000427926 HMCN2Q8NDA2 5059 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms