RNA–Protein interactions for RNA: ENST00000426870.1

LINC01953-201, Transcript of long intergenic non-protein coding RNA 1953, humanhuman

TSL 5 BASIC

Gene LINC01953, Length 717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01953-201ENST00000426870 BOD1L1Q8NFC6 3051 aa0.36□□□□□ -2.35
LINC01953-201ENST00000426870 PRUNE2Q8WUY3 3088 aa0.36□□□□□ -2.35
LINC01953-201ENST00000426870 SPRR2DP22532 72 aa0.36□□□□□ -2.35
LINC01953-201ENST00000426870 DEFB133Q30KQ1 61 aa0.36□□□□□ -2.35
LINC01953-201ENST00000426870 MKI67P46013 3256 aaKnown RBP0.36□□□□□ -2.35
LINC01953-201ENST00000426870 FLNCQ14315 2725 aa0.36□□□□□ -2.35
LINC01953-201ENST00000426870 SVEP1Q4LDE5 3571 aa0.35□□□□□ -2.35
LINC01953-201ENST00000426870 NSD1Q96L73 2696 aaPredicted RBP0.35□□□□□ -2.35
LINC01953-201ENST00000426870 ACANP16112 2415 aa0.35□□□□□ -2.35
LINC01953-201ENST00000426870 TRRAPQ9Y4A5 3859 aa0.35□□□□□ -2.35
LINC01953-201ENST00000426870 USP9YO00507 2555 aaPredicted RBP0.35□□□□□ -2.35
LINC01953-201ENST00000426870 DCHS1Q96JQ0 3298 aa0.35□□□□□ -2.35
LINC01953-201ENST00000426870 WDR87Q6ZQQ6 2873 aa0.35□□□□□ -2.35
LINC01953-201ENST00000426870 NBEAL2Q6ZNJ1 2754 aa0.35□□□□□ -2.35
LINC01953-201ENST00000426870 DNAH2Q9P225 4427 aa0.35□□□□□ -2.35
LINC01953-201ENST00000426870 PKD1P98161 4303 aa0.35□□□□□ -2.35
LINC01953-201ENST00000426870 HIVEP3Q5T1R4 2406 aa0.35□□□□□ -2.35
LINC01953-201ENST00000426870 DMDP11532 3685 aa0.35□□□□□ -2.35
LINC01953-201ENST00000426870 HTTP42858 3142 aa0.35□□□□□ -2.35
LINC01953-201ENST00000426870 CHD8Q9HCK8 2581 aa0.34□□□□□ -2.35
LINC01953-201ENST00000426870 LRBAP50851 2863 aa0.34□□□□□ -2.35
LINC01953-201ENST00000426870 PKHD1P08F94 4074 aa0.34□□□□□ -2.35
LINC01953-201ENST00000426870 ANK3Q12955 4377 aaKnown RBP0.34□□□□□ -2.35
LINC01953-201ENST00000426870 DNAH12Q6ZR08 3092 aa0.34□□□□□ -2.36
LINC01953-201ENST00000426870 DYNC2H1Q8NCM8 4307 aaKnown RBP0.34□□□□□ -2.36
LINC01953-201ENST00000426870 ZANQ9Y493 2812 aa0.34□□□□□ -2.36
LINC01953-201ENST00000426870 CSMD2Q7Z408 3487 aa0.34□□□□□ -2.36
LINC01953-201ENST00000426870 FAT1Q14517 4588 aa0.33□□□□□ -2.36
LINC01953-201ENST00000426870 FAT3Q8TDW7 4589 aa0.33□□□□□ -2.36
LINC01953-201ENST00000426870 CEP350Q5VT06 3117 aa0.33□□□□□ -2.36
LINC01953-201ENST00000426870 HTN3P15516 51 aa0.33□□□□□ -2.36
LINC01953-201ENST00000426870 SPRR2BP35325 72 aa0.33□□□□□ -2.36
LINC01953-201ENST00000426870 KRTAP19-5Q3LI72 72 aa0.33□□□□□ -2.36
LINC01953-201ENST00000426870 LINC01556Q5JQF7 62 aa0.33□□□□□ -2.36
LINC01953-201ENST00000426870 MAP1BP46821 2468 aaKnown RBP0.33□□□□□ -2.36
LINC01953-201ENST00000426870 SETXQ7Z333 2677 aaKnown RBP0.33□□□□□ -2.36
LINC01953-201ENST00000426870 NBEAQ8NFP9 2946 aa0.33□□□□□ -2.36
LINC01953-201ENST00000426870 ANKRD11Q6UB99 2663 aaPredicted RBP0.32□□□□□ -2.36
LINC01953-201ENST00000426870 HUWE1Q7Z6Z7 4374 aaKnown RBP0.32□□□□□ -2.36
LINC01953-201ENST00000426870 APOBP04114 4563 aaKnown RBP0.32□□□□□ -2.36
LINC01953-201ENST00000426870 CACNA1AO00555 2505 aa0.32□□□□□ -2.36
LINC01953-201ENST00000426870 LAMA1P25391 3075 aa0.32□□□□□ -2.36
LINC01953-201ENST00000426870 MUC3AQ02505 3323 aa0.32□□□□□ -2.36
LINC01953-201ENST00000426870 HIVEP1P15822 2718 aa0.32□□□□□ -2.36
LINC01953-201ENST00000426870 UNC79Q9P2D8 2635 aa0.32□□□□□ -2.36
LINC01953-201ENST00000426870 SONP18583 2426 aaKnown RBP0.32□□□□□ -2.36
LINC01953-201ENST00000426870 ADGRG4Q8IZF6 3080 aa0.32□□□□□ -2.36
LINC01953-201ENST00000426870 HRNRQ86YZ3 2850 aaPredicted RBP0.31□□□□□ -2.36
LINC01953-201ENST00000426870 LAMA3Q16787 3333 aa0.31□□□□□ -2.36
LINC01953-201ENST00000426870 ACACBO00763 2458 aa0.31□□□□□ -2.36
LINC01953-201ENST00000426870 CFAP47Q6ZTR5 3102 aa0.31□□□□□ -2.36
LINC01953-201ENST00000426870 MTORP42345 2549 aa0.31□□□□□ -2.36
LINC01953-201ENST00000426870 SYNE1Q8NF91 8797 aaKnown RBP0.31□□□□□ -2.36
LINC01953-201ENST00000426870 PLECQ15149 4684 aaKnown RBP0.31□□□□□ -2.36
LINC01953-201ENST00000426870 MT1AP04731 61 aa0.31□□□□□ -2.36
LINC01953-201ENST00000426870 MXRA5Q9NR99 2828 aa0.31□□□□□ -2.36
LINC01953-201ENST00000426870 CMYA5Q8N3K9 4069 aa0.31□□□□□ -2.36
LINC01953-201ENST00000426870 XIRP2A4UGR9 3374 aa0.31□□□□□ -2.36
LINC01953-201ENST00000426870 DNAH1Q9P2D7 4330 aa0.3□□□□□ -2.36
LINC01953-201ENST00000426870 UTP20O75691 2785 aaKnown RBP0.3□□□□□ -2.36
LINC01953-201ENST00000426870 NIPBLQ6KC79 2804 aaeCLIP0.3□□□□□ -2.36
LINC01953-201ENST00000426870 SPRR2AP35326 72 aa0.3□□□□□ -2.36
LINC01953-201ENST00000426870 LPAP08519 4548 aa0.3□□□□□ -2.36
LINC01953-201ENST00000426870 ZFYVE26Q68DK2 2539 aa0.3□□□□□ -2.36
LINC01953-201ENST00000426870 ANKHD1Q8IWZ3 2542 aaKnown RBP0.3□□□□□ -2.36
LINC01953-201ENST00000426870 VPS13CQ709C8 3753 aa0.3□□□□□ -2.36
LINC01953-201ENST00000426870 FREM2Q5SZK8 3169 aa0.3□□□□□ -2.36
LINC01953-201ENST00000426870 PTPN13Q12923 2485 aa0.29□□□□□ -2.36
LINC01953-201ENST00000426870 WDFY4Q6ZS81 3184 aa0.29□□□□□ -2.36
LINC01953-201ENST00000426870 SPRR2FQ96RM1 72 aa0.29□□□□□ -2.36
LINC01953-201ENST00000426870 ITPR1Q14643 2758 aa0.29□□□□□ -2.36
LINC01953-201ENST00000426870 RIF1Q5UIP0 2472 aaKnown RBP0.29□□□□□ -2.36
LINC01953-201ENST00000426870 DNAH10Q8IVF4 4471 aa0.29□□□□□ -2.36
LINC01953-201ENST00000426870 FLNBO75369 2602 aaKnown RBP0.29□□□□□ -2.36
LINC01953-201ENST00000426870 SPG11Q96JI7 2443 aa0.28□□□□□ -2.36
LINC01953-201ENST00000426870 LRRK2Q5S007 2527 aa0.28□□□□□ -2.36
LINC01953-201ENST00000426870 NCOR2Q9Y618 2525 aa0.28□□□□□ -2.36
LINC01953-201ENST00000426870 SPRR2EP22531 72 aa0.28□□□□□ -2.36
LINC01953-201ENST00000426870 TEP1Q99973 2627 aaKnown RBP0.28□□□□□ -2.37
LINC01953-201ENST00000426870 LOC400499M0QZD8 3231 aa0.28□□□□□ -2.37
LINC01953-201ENST00000426870 SRCAPQ6ZRS2 3230 aa0.28□□□□□ -2.37
LINC01953-201ENST00000426870 SPEGQ15772 3267 aa0.28□□□□□ -2.37
LINC01953-201ENST00000426870 DNAH9Q9NYC9 4486 aa0.27□□□□□ -2.37
LINC01953-201ENST00000426870 DEFB4AO15263 64 aa0.27□□□□□ -2.37
LINC01953-201ENST00000426870 RPS29P62273 56 aaKnown RBP0.27□□□□□ -2.37
LINC01953-201ENST00000426870 FAM186AA6NE01 2351 aa0.27□□□□□ -2.37
LINC01953-201ENST00000426870 EPG5Q9HCE0 2579 aa0.27□□□□□ -2.37
LINC01953-201ENST00000426870 UNC80Q8N2C7 3258 aa0.26□□□□□ -2.37
LINC01953-201ENST00000426870 DNAH5Q8TE73 4624 aa0.26□□□□□ -2.37
LINC01953-201ENST00000426870 CD52P31358 61 aa0.26□□□□□ -2.37
LINC01953-201ENST00000426870 MYO18BQ8IUG5 2567 aa0.26□□□□□ -2.37
LINC01953-201ENST00000426870 FLNAP21333 2647 aaKnown RBP0.26□□□□□ -2.37
LINC01953-201ENST00000426870 UTRNP46939 3433 aa0.26□□□□□ -2.37
LINC01953-201ENST00000426870 LRP1BQ9NZR2 4599 aa0.25□□□□□ -2.37
LINC01953-201ENST00000426870 TGP01266 2768 aa0.25□□□□□ -2.37
LINC01953-201ENST00000426870 USP9XQ93008 2570 aaPredicted RBP0.25□□□□□ -2.37
LINC01953-201ENST00000426870 FASNP49327 2511 aaKnown RBP0.25□□□□□ -2.37
LINC01953-201ENST00000426870 TLN2Q9Y4G6 2542 aa0.25□□□□□ -2.37
LINC01953-201ENST00000426870 Q9Y3F1 56 aa0.25□□□□□ -2.37
LINC01953-201ENST00000426870 MYO15AQ9UKN7 3530 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms