RNA–Protein interactions for RNA: ENST00000424968.5

LINC00240-202, long intergenic non-protein coding RNA 240, humanhuman

TSL 2

Gene LINC00240, Length 507 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-202ENST00000424968 DEFB110Q30KQ9 67 aa0.62□□□□□ -2.31
LINC00240-202ENST00000424968 RIF1Q5UIP0 2472 aaKnown RBP0.62□□□□□ -2.31
LINC00240-202ENST00000424968 CSMD1Q96PZ7 3565 aa0.62□□□□□ -2.31
LINC00240-202ENST00000424968 NBEAL1Q6ZS30 2694 aa0.61□□□□□ -2.31
LINC00240-202ENST00000424968 DMXL2Q8TDJ6 3036 aa0.61□□□□□ -2.31
LINC00240-202ENST00000424968 FAT4Q6V0I7 4981 aa0.61□□□□□ -2.31
LINC00240-202ENST00000424968 SONP18583 2426 aaKnown RBP0.61□□□□□ -2.31
LINC00240-202ENST00000424968 ACACBO00763 2458 aa0.61□□□□□ -2.31
LINC00240-202ENST00000424968 MGAQ8IWI9 3026 aa0.61□□□□□ -2.31
LINC00240-202ENST00000424968 MYO9AB2RTY4 2548 aa0.61□□□□□ -2.31
LINC00240-202ENST00000424968 DNHD1Q96M86 4753 aa0.6□□□□□ -2.31
LINC00240-202ENST00000424968 LRBAP50851 2863 aa0.6□□□□□ -2.31
LINC00240-202ENST00000424968 CHD7Q9P2D1 2997 aa0.6□□□□□ -2.31
LINC00240-202ENST00000424968 LAMA1P25391 3075 aa0.59□□□□□ -2.32
LINC00240-202ENST00000424968 CEP295Q9C0D2 2601 aa0.59□□□□□ -2.32
LINC00240-202ENST00000424968 ANKHD1Q8IWZ3 2542 aaKnown RBP0.59□□□□□ -2.32
LINC00240-202ENST00000424968 ITPR2Q14571 2701 aa0.58□□□□□ -2.32
LINC00240-202ENST00000424968 ATMQ13315 3056 aa0.58□□□□□ -2.32
LINC00240-202ENST00000424968 UBR4Q5T4S7 5183 aa0.58□□□□□ -2.32
LINC00240-202ENST00000424968 UTP20O75691 2785 aaKnown RBP0.58□□□□□ -2.32
LINC00240-202ENST00000424968 COL6A5A8TX70 2615 aa0.58□□□□□ -2.32
LINC00240-202ENST00000424968 LYSTQ99698 3801 aa0.57□□□□□ -2.32
LINC00240-202ENST00000424968 SPENQ96T58 3664 aaKnown RBP0.57□□□□□ -2.32
LINC00240-202ENST00000424968 STAB1Q9NY15 2570 aa0.57□□□□□ -2.32
LINC00240-202ENST00000424968 CSMD2Q7Z408 3487 aa0.57□□□□□ -2.32
LINC00240-202ENST00000424968 SPTAN1Q13813 2472 aaKnown RBP0.57□□□□□ -2.32
LINC00240-202ENST00000424968 MROH2BQ7Z745 1585 aa0.57□□□□□ -2.32
LINC00240-202ENST00000424968 TGP01266 2768 aa0.57□□□□□ -2.32
LINC00240-202ENST00000424968 ADGRG4Q8IZF6 3080 aa0.56□□□□□ -2.32
LINC00240-202ENST00000424968 CCDC168Q8NDH2 2452 aa0.56□□□□□ -2.32
LINC00240-202ENST00000424968 CENPEQ02224 2701 aa0.56□□□□□ -2.32
LINC00240-202ENST00000424968 VPS13CQ709C8 3753 aa0.56□□□□□ -2.32
LINC00240-202ENST00000424968 PCLOQ9Y6V0 5065 aa0.56□□□□□ -2.32
LINC00240-202ENST00000424968 PHGR1C9JFL3 82 aa0.56□□□□□ -2.32
LINC00240-202ENST00000424968 SNRPGP62308 76 aaKnown RBP0.56□□□□□ -2.32
LINC00240-202ENST00000424968 USP9YO00507 2555 aaPredicted RBP0.56□□□□□ -2.32
LINC00240-202ENST00000424968 TLN1Q9Y490 2541 aaKnown RBP0.56□□□□□ -2.32
LINC00240-202ENST00000424968 RYR1P21817 5038 aa0.55□□□□□ -2.32
LINC00240-202ENST00000424968 NBPF19A0A087WUL8 3843 aa0.55□□□□□ -2.32
LINC00240-202ENST00000424968 COL7A1Q02388 2944 aa0.54□□□□□ -2.32
LINC00240-202ENST00000424968 KMT2CQ8NEZ4 4911 aaKnown RBP0.54□□□□□ -2.32
LINC00240-202ENST00000424968 CUBNO60494 3623 aa0.54□□□□□ -2.32
LINC00240-202ENST00000424968 MXRA5Q9NR99 2828 aa0.54□□□□□ -2.32
LINC00240-202ENST00000424968 ZANQ9Y493 2812 aa0.54□□□□□ -2.32
LINC00240-202ENST00000424968 CEP250Q9BV73 2442 aa0.54□□□□□ -2.32
LINC00240-202ENST00000424968 AHNAK2Q8IVF2 5795 aa0.54□□□□□ -2.32
LINC00240-202ENST00000424968 POLR2KP53803 58 aaKnown RBP0.54□□□□□ -2.32
LINC00240-202ENST00000424968 STAB2Q8WWQ8 2551 aa0.54□□□□□ -2.32
LINC00240-202ENST00000424968 SVEP1Q4LDE5 3571 aa0.54□□□□□ -2.32
LINC00240-202ENST00000424968 HIVEP1P15822 2718 aa0.54□□□□□ -2.32
LINC00240-202ENST00000424968 TENM2Q9NT68 2774 aa0.54□□□□□ -2.32
LINC00240-202ENST00000424968 HYDINQ4G0P3 5121 aa0.54□□□□□ -2.32
LINC00240-202ENST00000424968 MAP1AP78559 2803 aaPredicted RBP0.53□□□□□ -2.32
LINC00240-202ENST00000424968 FSIP2Q5CZC0 6907 aa0.53□□□□□ -2.32
LINC00240-202ENST00000424968 TACC2O95359 2948 aa0.53□□□□□ -2.32
LINC00240-202ENST00000424968 RYR3Q15413 4870 aa0.53□□□□□ -2.32
LINC00240-202ENST00000424968 MT1AP04731 61 aa0.52□□□□□ -2.33
LINC00240-202ENST00000424968 DUOX1Q9NRD9 1551 aa0.52□□□□□ -2.33
LINC00240-202ENST00000424968 MUC2Q02817 5179 aa0.51□□□□□ -2.33
LINC00240-202ENST00000424968 EPPK1P58107 5090 aaKnown RBP0.51□□□□□ -2.33
LINC00240-202ENST00000424968 TLN2Q9Y4G6 2542 aa0.51□□□□□ -2.33
LINC00240-202ENST00000424968 MACF1Q9UPN3 7388 aaKnown RBP0.5□□□□□ -2.33
LINC00240-202ENST00000424968 GCC2Q8IWJ2 1684 aa0.49□□□□□ -2.33
LINC00240-202ENST00000424968 CLPSL2Q6UWE3 100 aa0.49□□□□□ -2.33
LINC00240-202ENST00000424968 PKD1P98161 4303 aa0.49□□□□□ -2.33
LINC00240-202ENST00000424968 HERC1Q15751 4861 aa0.49□□□□□ -2.33
LINC00240-202ENST00000424968 HECTD4Q9Y4D8 3996 aa0.48□□□□□ -2.33
LINC00240-202ENST00000424968 MGAM2Q2M2H8 2515 aa0.48□□□□□ -2.33
LINC00240-202ENST00000424968 GPR98Q8WXG9 6306 aa0.47□□□□□ -2.33
LINC00240-202ENST00000424968 ABCA13Q86UQ4 5058 aa0.47□□□□□ -2.33
LINC00240-202ENST00000424968 BIRC6Q9NR09 4857 aa0.47□□□□□ -2.33
LINC00240-202ENST00000424968 KRTAP6-2Q3LI66 62 aa0.47□□□□□ -2.33
LINC00240-202ENST00000424968 RNF213Q63HN8 5207 aa0.47□□□□□ -2.33
LINC00240-202ENST00000424968 RYR2Q92736 4967 aa0.47□□□□□ -2.33
LINC00240-202ENST00000424968 AKAP9Q99996 3911 aa0.46□□□□□ -2.34
LINC00240-202ENST00000424968 VPS13BQ7Z7G8 4022 aa0.46□□□□□ -2.34
LINC00240-202ENST00000424968 HSPG2P98160 4391 aa0.46□□□□□ -2.34
LINC00240-202ENST00000424968 SPRR2EP22531 72 aa0.46□□□□□ -2.34
LINC00240-202ENST00000424968 HERC2O95714 4834 aa0.46□□□□□ -2.34
LINC00240-202ENST00000424968 KIAA1109Q2LD37 5005 aa0.46□□□□□ -2.34
LINC00240-202ENST00000424968 MUC5BQ9HC84 5762 aaPredicted RBP0.45□□□□□ -2.34
LINC00240-202ENST00000424968 SPART-AS1P0CW21 52 aa0.44□□□□□ -2.34
LINC00240-202ENST00000424968 SYNE2Q8WXH0 6885 aaKnown RBP0.44□□□□□ -2.34
LINC00240-202ENST00000424968 DSTQ03001 7570 aaKnown RBP0.44□□□□□ -2.34
LINC00240-202ENST00000424968 HMCN2Q8NDA2 5059 aa0.43□□□□□ -2.34
LINC00240-202ENST00000424968 TRRAPQ9Y4A5 3859 aa0.42□□□□□ -2.34
LINC00240-202ENST00000424968 NEBP20929 6669 aa0.42□□□□□ -2.34
LINC00240-202ENST00000424968 SSPOA2VEC9 5147 aa0.41□□□□□ -2.34
LINC00240-202ENST00000424968 FLGP20930 4061 aaPredicted RBP0.41□□□□□ -2.34
LINC00240-202ENST00000424968 DNAH1Q9P2D7 4330 aa0.4□□□□□ -2.34
LINC00240-202ENST00000424968 CMYA5Q8N3K9 4069 aa0.39□□□□□ -2.35
LINC00240-202ENST00000424968 SACSQ9NZJ4 4579 aa0.38□□□□□ -2.35
LINC00240-202ENST00000424968 RPL39P62891 51 aaKnown RBP0.38□□□□□ -2.35
LINC00240-202ENST00000424968 SPRR2FQ96RM1 72 aa0.38□□□□□ -2.35
LINC00240-202ENST00000424968 PKHD1P08F94 4074 aa0.38□□□□□ -2.35
LINC00240-202ENST00000424968 AHNAKQ09666 5890 aaKnown RBP0.38□□□□□ -2.35
LINC00240-202ENST00000424968 KMT2DO14686 5537 aa0.37□□□□□ -2.35
LINC00240-202ENST00000424968 DNAH3Q8TD57 4116 aa0.36□□□□□ -2.35
LINC00240-202ENST00000424968 DYNC2H1Q8NCM8 4307 aaKnown RBP0.36□□□□□ -2.35
LINC00240-202ENST00000424968 LRP1BQ9NZR2 4599 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms