RNA–Protein interactions for RNA: ENST00000420886.6

SBNO1-202, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SBNO1, Length 10,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-202ENST00000420886 DNAH2Q9P225 4427 aa2.93□□□□□ -1.94
SBNO1-202ENST00000420886 KMT2AQ03164 3969 aa2.92□□□□□ -1.94
SBNO1-202ENST00000420886 ANK3Q12955 4377 aaKnown RBP2.92□□□□□ -1.94
SBNO1-202ENST00000420886 DNAH6Q9C0G6 4158 aa2.91□□□□□ -1.94
SBNO1-202ENST00000420886 A0A1B0GVY2 172 aa2.88□□□□□ -1.95
SBNO1-202ENST00000420886 HUWE1Q7Z6Z7 4374 aaKnown RBP2.86□□□□□ -1.95
SBNO1-202ENST00000420886 DNAH10Q8IVF4 4471 aa2.85□□□□□ -1.95
SBNO1-202ENST00000420886 KRTAP10-10P60014 251 aa2.83□□□□□ -1.96
SBNO1-202ENST00000420886 PRKDCP78527 4128 aaKnown RBP2.76□□□□□ -1.97
SBNO1-202ENST00000420886 KRTAP10-12P60413 245 aa2.76□□□□□ -1.97
SBNO1-202ENST00000420886 DNAH1Q9P2D7 4330 aa2.76□□□□□ -1.97
SBNO1-202ENST00000420886 MT3P25713 68 aa2.75□□□□□ -1.97
SBNO1-202ENST00000420886 KRTAP12-3P60328 96 aa2.75□□□□□ -1.97
SBNO1-202ENST00000420886 LCE3AQ5TA76 89 aa2.73□□□□□ -1.97
SBNO1-202ENST00000420886 DNAH8Q96JB1 4490 aa2.72□□□□□ -1.97
SBNO1-202ENST00000420886 DYNC2H1Q8NCM8 4307 aaKnown RBP2.69□□□□□ -1.98
SBNO1-202ENST00000420886 FLGP20930 4061 aaPredicted RBP2.66□□□□□ -1.98
SBNO1-202ENST00000420886 SPRR5A0A1B0GTR4 108 aa2.66□□□□□ -1.98
SBNO1-202ENST00000420886 DNAH17Q9UFH2 4485 aa2.65□□□□□ -1.99
SBNO1-202ENST00000420886 LORP23490 312 aaPredicted RBP2.64□□□□□ -1.99
SBNO1-202ENST00000420886 DNAH9Q9NYC9 4486 aa2.63□□□□□ -1.99
SBNO1-202ENST00000420886 KRTAP10-4P60372 401 aaPredicted RBP2.63□□□□□ -1.99
SBNO1-202ENST00000420886 KRTAP21-3Q3LHN1 58 aa2.62□□□□□ -1.99
SBNO1-202ENST00000420886 VPS13DQ5THJ4 4388 aa2.62□□□□□ -1.99
SBNO1-202ENST00000420886 DNAH11Q96DT5 4516 aa2.6□□□□□ -1.99
SBNO1-202ENST00000420886 PKHD1P08F94 4074 aa2.59□□□□□ -2
SBNO1-202ENST00000420886 MT1HL1P0DM35 61 aa2.56□□□□□ -2
SBNO1-202ENST00000420886 STARD9Q9P2P6 4700 aa2.55□□□□□ -2
SBNO1-202ENST00000420886 PLECQ15149 4684 aaKnown RBP2.52□□□□□ -2.01
SBNO1-202ENST00000420886 PKHD1L1Q86WI1 4243 aa2.51□□□□□ -2.01
SBNO1-202ENST00000420886 FAT2Q9NYQ8 4349 aa2.51□□□□□ -2.01
SBNO1-202ENST00000420886 LCE3CQ5T5A8 94 aa2.5□□□□□ -2.01
SBNO1-202ENST00000420886 PKD1P98161 4303 aa2.49□□□□□ -2.01
SBNO1-202ENST00000420886 KRTAP8-1Q8IUC2 63 aa2.49□□□□□ -2.01
SBNO1-202ENST00000420886 SPRR2GQ9BYE4 73 aa2.49□□□□□ -2.01
SBNO1-202ENST00000420886 KRTAP10-5P60370 271 aa2.49□□□□□ -2.01
SBNO1-202ENST00000420886 CRCT1Q9UGL9 99 aa2.41□□□□□ -2.02
SBNO1-202ENST00000420886 TNXBP22105 4242 aa2.38□□□□□ -2.03
SBNO1-202ENST00000420886 DNAH5Q8TE73 4624 aa2.36□□□□□ -2.03
SBNO1-202ENST00000420886 KRTAP19-5Q3LI72 72 aa2.36□□□□□ -2.03
SBNO1-202ENST00000420886 KRTAP12-4P60329 112 aa2.33□□□□□ -2.04
SBNO1-202ENST00000420886 HSPG2P98160 4391 aa2.31□□□□□ -2.04
SBNO1-202ENST00000420886 KRTAP4-1Q9BYQ7 146 aa2.31□□□□□ -2.04
SBNO1-202ENST00000420886 APOBP04114 4563 aaKnown RBP2.31□□□□□ -2.04
SBNO1-202ENST00000420886 LRP1BQ9NZR2 4599 aa2.28□□□□□ -2.04
SBNO1-202ENST00000420886 LRP1Q07954 4544 aaKnown RBP2.25□□□□□ -2.05
SBNO1-202ENST00000420886 KRTAP19-1Q8IUB9 90 aa2.23□□□□□ -2.05
SBNO1-202ENST00000420886 KRTAP10-7P60409 375 aaPredicted RBP2.23□□□□□ -2.05
SBNO1-202ENST00000420886 MT2AP02795 61 aa2.22□□□□□ -2.05
SBNO1-202ENST00000420886 MT1HP80294 61 aa2.22□□□□□ -2.05
SBNO1-202ENST00000420886 KRTAP19-8Q3LI54 63 aa2.22□□□□□ -2.05
SBNO1-202ENST00000420886 SACSQ9NZJ4 4579 aa2.22□□□□□ -2.05
SBNO1-202ENST00000420886 MT1XP80297 61 aa2.21□□□□□ -2.06
SBNO1-202ENST00000420886 DYNC1H1Q14204 4646 aaKnown RBP2.2□□□□□ -2.06
SBNO1-202ENST00000420886 KRTAP4-5Q9BYR2 181 aa2.19□□□□□ -2.06
SBNO1-202ENST00000420886 MYCBP2O75592 4640 aa2.19□□□□□ -2.06
SBNO1-202ENST00000420886 MT1FP04733 61 aa2.19□□□□□ -2.06
SBNO1-202ENST00000420886 FAT1Q14517 4588 aa2.16□□□□□ -2.06
SBNO1-202ENST00000420886 LCE3BQ5TA77 95 aa2.14□□□□□ -2.07
SBNO1-202ENST00000420886 LCE3DQ9BYE3 92 aa2.13□□□□□ -2.07
SBNO1-202ENST00000420886 FAT3Q8TDW7 4589 aa2.13□□□□□ -2.07
SBNO1-202ENST00000420886 KRTAP2-3P0C7H8 128 aa2.12□□□□□ -2.07
SBNO1-202ENST00000420886 KRTAP2-4Q9BYR9 128 aa2.12□□□□□ -2.07
SBNO1-202ENST00000420886 KRTAP2-1Q9BYU5 128 aa2.12□□□□□ -2.07
SBNO1-202ENST00000420886 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
SBNO1-202ENST00000420886 LRP2P98164 4655 aa2.08□□□□□ -2.08
SBNO1-202ENST00000420886 PRM1P04553 51 aa2.07□□□□□ -2.08
SBNO1-202ENST00000420886 MT1BP07438 61 aa2.07□□□□□ -2.08
SBNO1-202ENST00000420886 LPAP08519 4548 aa2.07□□□□□ -2.08
SBNO1-202ENST00000420886 MT1LQ93083 61 aa2.07□□□□□ -2.08
SBNO1-202ENST00000420886 MT1GP13640 62 aa2.06□□□□□ -2.08
SBNO1-202ENST00000420886 KRTAP9-8Q9BYQ0 159 aa2.02□□□□□ -2.09
SBNO1-202ENST00000420886 MT1EP04732 61 aa2.02□□□□□ -2.09
SBNO1-202ENST00000420886 MUC17Q685J3 4493 aa2□□□□□ -2.09
SBNO1-202ENST00000420886 KRTAP19-2Q3LHN2 52 aa1.99□□□□□ -2.09
SBNO1-202ENST00000420886 SPRR2FQ96RM1 72 aa1.98□□□□□ -2.09
SBNO1-202ENST00000420886 KRTAP4-8A0A0G2JLE6 195 aa1.97□□□□□ -2.09
SBNO1-202ENST00000420886 KRTAP4-8Q9BYQ9 185 aa1.97□□□□□ -2.09
SBNO1-202ENST00000420886 DNHD1Q96M86 4753 aa1.96□□□□□ -2.1
SBNO1-202ENST00000420886 KRTAP4-7Q9BYR0 210 aa1.95□□□□□ -2.1
SBNO1-202ENST00000420886 HERC1Q15751 4861 aa1.95□□□□□ -2.1
SBNO1-202ENST00000420886 MT1AP04731 61 aa1.94□□□□□ -2.1
SBNO1-202ENST00000420886 KRTAP9-3Q9BYQ3 159 aa1.94□□□□□ -2.1
SBNO1-202ENST00000420886 LCE2CQ5TA81 110 aa1.94□□□□□ -2.1
SBNO1-202ENST00000420886 KRTAP19-3Q7Z4W3 81 aa1.91□□□□□ -2.1
SBNO1-202ENST00000420886 KRTAP9-6A8MVA2 160 aa1.89□□□□□ -2.11
SBNO1-202ENST00000420886 HYDINQ4G0P3 5121 aa1.89□□□□□ -2.11
SBNO1-202ENST00000420886 KMT2CQ8NEZ4 4911 aaKnown RBP1.88□□□□□ -2.11
SBNO1-202ENST00000420886 KRTAP17-1Q9BYP8 105 aa1.87□□□□□ -2.11
SBNO1-202ENST00000420886 LOC100996750A0A140TA64 210 aa1.87□□□□□ -2.11
SBNO1-202ENST00000420886 RYR1P21817 5038 aa1.86□□□□□ -2.11
SBNO1-202ENST00000420886 MT1MQ8N339 61 aa1.85□□□□□ -2.11
SBNO1-202ENST00000420886 SPRR2AP35326 72 aa1.85□□□□□ -2.11
SBNO1-202ENST00000420886 BIRC6Q9NR09 4857 aa1.83□□□□□ -2.12
SBNO1-202ENST00000420886 KRTAP9-2Q9BYQ4 174 aa1.83□□□□□ -2.12
SBNO1-202ENST00000420886 KRTAP19-7Q3SYF9 63 aa1.83□□□□□ -2.12
SBNO1-202ENST00000420886 LCE2BO14633 110 aa1.81□□□□□ -2.12
SBNO1-202ENST00000420886 KRTAP6-2Q3LI66 62 aa1.81□□□□□ -2.12
SBNO1-202ENST00000420886 SPRR2BP35325 72 aa1.78□□□□□ -2.12
SBNO1-202ENST00000420886 PCLOQ9Y6V0 5065 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms