RNA–Protein interactions for RNA: ENST00000420696.6

PBX1-203, Transcript of PBX homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-203ENST00000420696 KRTAP10-5P60370 271 aa5.15□□□□□ -1.58
PBX1-203ENST00000420696 DNAH1Q9P2D7 4330 aa5.14□□□□□ -1.59
PBX1-203ENST00000420696 SRRM2Q9UQ35 2752 aaKnown RBP5.13□□□□□ -1.59
PBX1-203ENST00000420696 LYSTQ99698 3801 aa5.13□□□□□ -1.59
PBX1-203ENST00000420696 PKD1L1Q8TDX9 2849 aa5.11□□□□□ -1.59
PBX1-203ENST00000420696 VPS13DQ5THJ4 4388 aa5.08□□□□□ -1.6
PBX1-203ENST00000420696 KMT2AQ03164 3969 aa5.07□□□□□ -1.6
PBX1-203ENST00000420696 PLECQ15149 4684 aaKnown RBP5.07□□□□□ -1.6
PBX1-203ENST00000420696 STARD9Q9P2P6 4700 aa5.05□□□□□ -1.6
PBX1-203ENST00000420696 DNAH10Q8IVF4 4471 aa5.04□□□□□ -1.6
PBX1-203ENST00000420696 KRTAP8-1Q8IUC2 63 aa5.03□□□□□ -1.6
PBX1-203ENST00000420696 KRTAP3-2Q9BYR7 98 aa5.01□□□□□ -1.61
PBX1-203ENST00000420696 FRAS1Q86XX4 4008 aa5.01□□□□□ -1.61
PBX1-203ENST00000420696 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
PBX1-203ENST00000420696 DNAH2Q9P225 4427 aa4.98□□□□□ -1.61
PBX1-203ENST00000420696 DNAH17Q9UFH2 4485 aa4.97□□□□□ -1.61
PBX1-203ENST00000420696 CSMD3Q7Z407 3707 aa4.95□□□□□ -1.62
PBX1-203ENST00000420696 MT1HL1P0DM35 61 aa4.94□□□□□ -1.62
PBX1-203ENST00000420696 HECTD4Q9Y4D8 3996 aa4.92□□□□□ -1.62
PBX1-203ENST00000420696 DNHD1Q96M86 4753 aa4.92□□□□□ -1.62
PBX1-203ENST00000420696 COL7A1Q02388 2944 aa4.91□□□□□ -1.62
PBX1-203ENST00000420696 KRTAP3-3Q9BYR6 98 aa4.91□□□□□ -1.62
PBX1-203ENST00000420696 MEGF8Q7Z7M0 2845 aa4.91□□□□□ -1.62
PBX1-203ENST00000420696 DNAH8Q96JB1 4490 aa4.86□□□□□ -1.63
PBX1-203ENST00000420696 KRTAP10-7P60409 375 aaPredicted RBP4.85□□□□□ -1.63
PBX1-203ENST00000420696 FAT2Q9NYQ8 4349 aa4.84□□□□□ -1.63
PBX1-203ENST00000420696 DNAH11Q96DT5 4516 aa4.83□□□□□ -1.64
PBX1-203ENST00000420696 KRTAP19-4Q3LI73 84 aa4.82□□□□□ -1.64
PBX1-203ENST00000420696 SACSQ9NZJ4 4579 aa4.81□□□□□ -1.64
PBX1-203ENST00000420696 DNAH5Q8TE73 4624 aa4.78□□□□□ -1.64
PBX1-203ENST00000420696 PKD1P98161 4303 aa4.77□□□□□ -1.65
PBX1-203ENST00000420696 LORP23490 312 aaPredicted RBP4.75□□□□□ -1.65
PBX1-203ENST00000420696 KRTAP10-4P60372 401 aaPredicted RBP4.74□□□□□ -1.65
PBX1-203ENST00000420696 VPS13BQ7Z7G8 4022 aa4.73□□□□□ -1.65
PBX1-203ENST00000420696 PKHD1L1Q86WI1 4243 aa4.72□□□□□ -1.65
PBX1-203ENST00000420696 KRTAP4-5Q9BYR2 181 aa4.71□□□□□ -1.65
PBX1-203ENST00000420696 LRP1BQ9NZR2 4599 aa4.71□□□□□ -1.66
PBX1-203ENST00000420696 HYDINQ4G0P3 5121 aa4.69□□□□□ -1.66
PBX1-203ENST00000420696 DYNC1H1Q14204 4646 aaKnown RBP4.66□□□□□ -1.66
PBX1-203ENST00000420696 PKHD1P08F94 4074 aa4.62□□□□□ -1.67
PBX1-203ENST00000420696 APOBP04114 4563 aaKnown RBP4.61□□□□□ -1.67
PBX1-203ENST00000420696 HSPG2P98160 4391 aa4.6□□□□□ -1.67
PBX1-203ENST00000420696 SPRR2FQ96RM1 72 aa4.57□□□□□ -1.68
PBX1-203ENST00000420696 RYR2Q92736 4967 aa4.51□□□□□ -1.69
PBX1-203ENST00000420696 KRTAP17-1Q9BYP8 105 aa4.5□□□□□ -1.69
PBX1-203ENST00000420696 LCE3CQ5T5A8 94 aa4.47□□□□□ -1.69
PBX1-203ENST00000420696 TNXBP22105 4242 aa4.46□□□□□ -1.69
PBX1-203ENST00000420696 SPRR2GQ9BYE4 73 aa4.45□□□□□ -1.7
PBX1-203ENST00000420696 FAT1Q14517 4588 aa4.44□□□□□ -1.7
PBX1-203ENST00000420696 KRTAP19-5Q3LI72 72 aa4.4□□□□□ -1.71
PBX1-203ENST00000420696 MT2AP02795 61 aa4.39□□□□□ -1.71
PBX1-203ENST00000420696 KMT2CQ8NEZ4 4911 aaKnown RBP4.38□□□□□ -1.71
PBX1-203ENST00000420696 FAT3Q8TDW7 4589 aa4.38□□□□□ -1.71
PBX1-203ENST00000420696 KRTAP12-4P60329 112 aa4.36□□□□□ -1.71
PBX1-203ENST00000420696 MT1HP80294 61 aa4.36□□□□□ -1.71
PBX1-203ENST00000420696 RYR3Q15413 4870 aa4.29□□□□□ -1.72
PBX1-203ENST00000420696 SPRR2EP22531 72 aa4.27□□□□□ -1.73
PBX1-203ENST00000420696 SPRR2BP35325 72 aa4.27□□□□□ -1.73
PBX1-203ENST00000420696 SPRR2AP35326 72 aa4.27□□□□□ -1.73
PBX1-203ENST00000420696 LRP1Q07954 4544 aaKnown RBP4.25□□□□□ -1.73
PBX1-203ENST00000420696 RYR1P21817 5038 aa4.24□□□□□ -1.73
PBX1-203ENST00000420696 LCE3BQ5TA77 95 aa4.21□□□□□ -1.74
PBX1-203ENST00000420696 MT1FP04733 61 aa4.2□□□□□ -1.74
PBX1-203ENST00000420696 SPRR2DP22532 72 aa4.17□□□□□ -1.74
PBX1-203ENST00000420696 MYCBP2O75592 4640 aa4.17□□□□□ -1.74
PBX1-203ENST00000420696 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
PBX1-203ENST00000420696 LPAP08519 4548 aa4.17□□□□□ -1.74
PBX1-203ENST00000420696 MUC17Q685J3 4493 aa4.17□□□□□ -1.74
PBX1-203ENST00000420696 LCE2BO14633 110 aa4.16□□□□□ -1.74
PBX1-203ENST00000420696 KRTAP4-1Q9BYQ7 146 aa4.16□□□□□ -1.74
PBX1-203ENST00000420696 BIRC6Q9NR09 4857 aa4.15□□□□□ -1.74
PBX1-203ENST00000420696 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
PBX1-203ENST00000420696 EPPK1P58107 5090 aaKnown RBP4.15□□□□□ -1.75
PBX1-203ENST00000420696 MT1GP13640 62 aa4.12□□□□□ -1.75
PBX1-203ENST00000420696 KRTAP19-8Q3LI54 63 aa4.08□□□□□ -1.76
PBX1-203ENST00000420696 KIAA1109Q2LD37 5005 aa4.03□□□□□ -1.76
PBX1-203ENST00000420696 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
PBX1-203ENST00000420696 HERC2O95714 4834 aa4□□□□□ -1.77
PBX1-203ENST00000420696 MT3P25713 68 aa3.98□□□□□ -1.77
PBX1-203ENST00000420696 LCE2CQ5TA81 110 aa3.95□□□□□ -1.78
PBX1-203ENST00000420696 LCE2DQ5TA82 110 aaPredicted RBP3.9□□□□□ -1.79
PBX1-203ENST00000420696 KRTAP19-1Q8IUB9 90 aa3.88□□□□□ -1.79
PBX1-203ENST00000420696 LRP2P98164 4655 aa3.86□□□□□ -1.79
PBX1-203ENST00000420696 MT1XP80297 61 aa3.85□□□□□ -1.79
PBX1-203ENST00000420696 ABCA13Q86UQ4 5058 aa3.85□□□□□ -1.79
PBX1-203ENST00000420696 SPRR5A0A1B0GTR4 108 aa3.83□□□□□ -1.8
PBX1-203ENST00000420696 MT1LQ93083 61 aa3.81□□□□□ -1.8
PBX1-203ENST00000420696 KRTAP19-3Q7Z4W3 81 aa3.81□□□□□ -1.8
PBX1-203ENST00000420696 HERC1Q15751 4861 aa3.78□□□□□ -1.8
PBX1-203ENST00000420696 PCLOQ9Y6V0 5065 aa3.78□□□□□ -1.8
PBX1-203ENST00000420696 FLGP20930 4061 aaPredicted RBP3.76□□□□□ -1.81
PBX1-203ENST00000420696 MT1BP07438 61 aa3.76□□□□□ -1.81
PBX1-203ENST00000420696 KRTAP19-2Q3LHN2 52 aa3.76□□□□□ -1.81
PBX1-203ENST00000420696 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
PBX1-203ENST00000420696 KRTAP9-8Q9BYQ0 159 aa3.69□□□□□ -1.82
PBX1-203ENST00000420696 PRM1P04553 51 aa3.67□□□□□ -1.82
PBX1-203ENST00000420696 KRTAP4-8A0A0G2JLE6 195 aa3.67□□□□□ -1.82
PBX1-203ENST00000420696 KRTAP4-8Q9BYQ9 185 aa3.67□□□□□ -1.82
PBX1-203ENST00000420696 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
PBX1-203ENST00000420696 MT4P47944 62 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms