RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 KRTAP6-2Q3LI66 62 aa0.81□□□□□ -2.28
PTP4A1P1-201ENST00000420539 KRTAP8-1Q8IUC2 63 aa0.81□□□□□ -2.28
PTP4A1P1-201ENST00000420539 FLGP20930 4061 aaPredicted RBP0.8□□□□□ -2.28
PTP4A1P1-201ENST00000420539 NBEAQ8NFP9 2946 aa0.8□□□□□ -2.28
PTP4A1P1-201ENST00000420539 HIVEP1P15822 2718 aa0.8□□□□□ -2.28
PTP4A1P1-201ENST00000420539 NBPF19A0A087WUL8 3843 aa0.79□□□□□ -2.28
PTP4A1P1-201ENST00000420539 ZFHX4Q86UP3 3567 aa0.79□□□□□ -2.28
PTP4A1P1-201ENST00000420539 APOBP04114 4563 aaKnown RBP0.79□□□□□ -2.28
PTP4A1P1-201ENST00000420539 CD52P31358 61 aa0.79□□□□□ -2.28
PTP4A1P1-201ENST00000420539 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
PTP4A1P1-201ENST00000420539 AHNAK2Q8IVF2 5795 aa0.79□□□□□ -2.28
PTP4A1P1-201ENST00000420539 CELSR3Q9NYQ7 3312 aa0.79□□□□□ -2.28
PTP4A1P1-201ENST00000420539 FASNP49327 2511 aaKnown RBP0.78□□□□□ -2.28
PTP4A1P1-201ENST00000420539 MT1AP04731 61 aa0.78□□□□□ -2.28
PTP4A1P1-201ENST00000420539 HTN3P15516 51 aa0.78□□□□□ -2.28
PTP4A1P1-201ENST00000420539 SPRR2AP35326 72 aa0.78□□□□□ -2.28
PTP4A1P1-201ENST00000420539 ITPR3Q14573 2671 aa0.78□□□□□ -2.29
PTP4A1P1-201ENST00000420539 DEFB133Q30KQ1 61 aa0.76□□□□□ -2.29
PTP4A1P1-201ENST00000420539 DEFB124Q8NES8 71 aa0.76□□□□□ -2.29
PTP4A1P1-201ENST00000420539 ZANQ9Y493 2812 aa0.76□□□□□ -2.29
PTP4A1P1-201ENST00000420539 TENM3Q9P273 2699 aa0.76□□□□□ -2.29
PTP4A1P1-201ENST00000420539 TEP1Q99973 2627 aaKnown RBP0.76□□□□□ -2.29
PTP4A1P1-201ENST00000420539 LRP1BQ9NZR2 4599 aa0.76□□□□□ -2.29
PTP4A1P1-201ENST00000420539 DNAH6Q9C0G6 4158 aa0.75□□□□□ -2.29
PTP4A1P1-201ENST00000420539 DNAH7Q8WXX0 4024 aa0.75□□□□□ -2.29
PTP4A1P1-201ENST00000420539 LINC01556Q5JQF7 62 aa0.75□□□□□ -2.29
PTP4A1P1-201ENST00000420539 SPTBN5Q9NRC6 3674 aaKnown RBP0.75□□□□□ -2.29
PTP4A1P1-201ENST00000420539 MYO18BQ8IUG5 2567 aa0.75□□□□□ -2.29
PTP4A1P1-201ENST00000420539 LAMA5O15230 3695 aa0.74□□□□□ -2.29
PTP4A1P1-201ENST00000420539 COL6A3P12111 3177 aa0.72□□□□□ -2.29
PTP4A1P1-201ENST00000420539 TLN2Q9Y4G6 2542 aa0.72□□□□□ -2.29
PTP4A1P1-201ENST00000420539 AKAP9Q99996 3911 aa0.71□□□□□ -2.3
PTP4A1P1-201ENST00000420539 WDR87Q6ZQQ6 2873 aa0.71□□□□□ -2.3
PTP4A1P1-201ENST00000420539 FAT3Q8TDW7 4589 aa0.71□□□□□ -2.3
PTP4A1P1-201ENST00000420539 FAT4Q6V0I7 4981 aa0.71□□□□□ -2.3
PTP4A1P1-201ENST00000420539 PKHD1P08F94 4074 aa0.71□□□□□ -2.3
PTP4A1P1-201ENST00000420539 MGAQ8IWI9 3026 aa0.7□□□□□ -2.3
PTP4A1P1-201ENST00000420539 HTTP42858 3142 aa0.7□□□□□ -2.3
PTP4A1P1-201ENST00000420539 MAST4O15021 2626 aa0.69□□□□□ -2.3
PTP4A1P1-201ENST00000420539 SVEP1Q4LDE5 3571 aa0.69□□□□□ -2.3
PTP4A1P1-201ENST00000420539 DEFB4AO15263 64 aa0.69□□□□□ -2.3
PTP4A1P1-201ENST00000420539 HMCN2Q8NDA2 5059 aa0.69□□□□□ -2.3
PTP4A1P1-201ENST00000420539 TRIOO75962 3097 aa0.68□□□□□ -2.3
PTP4A1P1-201ENST00000420539 USP9XQ93008 2570 aaPredicted RBP0.68□□□□□ -2.3
PTP4A1P1-201ENST00000420539 TGP01266 2768 aa0.68□□□□□ -2.3
PTP4A1P1-201ENST00000420539 SMR3BP02814 79 aaPredicted RBP0.68□□□□□ -2.3
PTP4A1P1-201ENST00000420539 RPS29P62273 56 aaKnown RBP0.67□□□□□ -2.3
PTP4A1P1-201ENST00000420539 KRTAP19-5Q3LI72 72 aa0.67□□□□□ -2.3
PTP4A1P1-201ENST00000420539 FLNAP21333 2647 aaKnown RBP0.67□□□□□ -2.3
PTP4A1P1-201ENST00000420539 DNAH1Q9P2D7 4330 aa0.66□□□□□ -2.3
PTP4A1P1-201ENST00000420539 SPRR2EP22531 72 aa0.66□□□□□ -2.3
PTP4A1P1-201ENST00000420539 FAT1Q14517 4588 aa0.65□□□□□ -2.31
PTP4A1P1-201ENST00000420539 RELNP78509 3460 aa0.65□□□□□ -2.31
PTP4A1P1-201ENST00000420539 SPRR2FQ96RM1 72 aa0.64□□□□□ -2.31
PTP4A1P1-201ENST00000420539 MAP1AP78559 2803 aaPredicted RBP0.64□□□□□ -2.31
PTP4A1P1-201ENST00000420539 CEP250Q9BV73 2442 aa0.63□□□□□ -2.31
PTP4A1P1-201ENST00000420539 LAMA1P25391 3075 aa0.63□□□□□ -2.31
PTP4A1P1-201ENST00000420539 DNAH10Q8IVF4 4471 aa0.63□□□□□ -2.31
PTP4A1P1-201ENST00000420539 CFAP54Q96N23 3096 aa0.63□□□□□ -2.31
PTP4A1P1-201ENST00000420539 MXRA5Q9NR99 2828 aa0.62□□□□□ -2.31
PTP4A1P1-201ENST00000420539 MGAM2Q2M2H8 2515 aa0.61□□□□□ -2.31
PTP4A1P1-201ENST00000420539 CSMD1Q96PZ7 3565 aa0.6□□□□□ -2.31
PTP4A1P1-201ENST00000420539 DMXL2Q8TDJ6 3036 aa0.6□□□□□ -2.31
PTP4A1P1-201ENST00000420539 ITPR1Q14643 2758 aa0.59□□□□□ -2.32
PTP4A1P1-201ENST00000420539 PLECQ15149 4684 aaKnown RBP0.57□□□□□ -2.32
PTP4A1P1-201ENST00000420539 PHGR1C9JFL3 82 aa0.57□□□□□ -2.32
PTP4A1P1-201ENST00000420539 ADGRG4Q8IZF6 3080 aa0.57□□□□□ -2.32
PTP4A1P1-201ENST00000420539 FRYLO94915 3013 aa0.56□□□□□ -2.32
PTP4A1P1-201ENST00000420539 CEP350Q5VT06 3117 aa0.55□□□□□ -2.32
PTP4A1P1-201ENST00000420539 PRUNE2Q8WUY3 3088 aa0.55□□□□□ -2.32
PTP4A1P1-201ENST00000420539 NIPBLQ6KC79 2804 aaeCLIP0.55□□□□□ -2.32
PTP4A1P1-201ENST00000420539 LRP2P98164 4655 aa0.55□□□□□ -2.32
PTP4A1P1-201ENST00000420539 CFAP46Q8IYW2 2715 aa0.54□□□□□ -2.32
PTP4A1P1-201ENST00000420539 LAMA3Q16787 3333 aa0.54□□□□□ -2.32
PTP4A1P1-201ENST00000420539 AHNAKQ09666 5890 aaKnown RBP0.54□□□□□ -2.32
PTP4A1P1-201ENST00000420539 CENPEQ02224 2701 aa0.53□□□□□ -2.32
PTP4A1P1-201ENST00000420539 LRBAP50851 2863 aa0.53□□□□□ -2.32
PTP4A1P1-201ENST00000420539 NBEAL1Q6ZS30 2694 aa0.51□□□□□ -2.33
PTP4A1P1-201ENST00000420539 MUC5BQ9HC84 5762 aaPredicted RBP0.51□□□□□ -2.33
PTP4A1P1-201ENST00000420539 DNAH12Q6ZR08 3092 aa0.51□□□□□ -2.33
PTP4A1P1-201ENST00000420539 BOD1L1Q8NFC6 3051 aa0.51□□□□□ -2.33
PTP4A1P1-201ENST00000420539 C5orf42Q9H799 3197 aa0.51□□□□□ -2.33
PTP4A1P1-201ENST00000420539 STAB2Q8WWQ8 2551 aa0.51□□□□□ -2.33
PTP4A1P1-201ENST00000420539 HERC1Q15751 4861 aa0.5□□□□□ -2.33
PTP4A1P1-201ENST00000420539 CMYA5Q8N3K9 4069 aa0.5□□□□□ -2.33
PTP4A1P1-201ENST00000420539 SPTAN1Q13813 2472 aaKnown RBP0.5□□□□□ -2.33
PTP4A1P1-201ENST00000420539 DOPEY1Q5JWR5 2465 aa0.5□□□□□ -2.33
PTP4A1P1-201ENST00000420539 ATMQ13315 3056 aa0.5□□□□□ -2.33
PTP4A1P1-201ENST00000420539 TEX15Q9BXT5 2789 aa0.49□□□□□ -2.33
PTP4A1P1-201ENST00000420539 ITPR2Q14571 2701 aa0.48□□□□□ -2.33
PTP4A1P1-201ENST00000420539 CEP295Q9C0D2 2601 aa0.46□□□□□ -2.34
PTP4A1P1-201ENST00000420539 CFAP47Q6ZTR5 3102 aa0.46□□□□□ -2.34
PTP4A1P1-201ENST00000420539 TLN1Q9Y490 2541 aaKnown RBP0.46□□□□□ -2.34
PTP4A1P1-201ENST00000420539 MKI67P46013 3256 aaKnown RBP0.46□□□□□ -2.34
PTP4A1P1-201ENST00000420539 WDFY4Q6ZS81 3184 aa0.45□□□□□ -2.34
PTP4A1P1-201ENST00000420539 VPS13AQ96RL7 3174 aa0.45□□□□□ -2.34
PTP4A1P1-201ENST00000420539 DYNC1H1Q14204 4646 aaKnown RBP0.45□□□□□ -2.34
PTP4A1P1-201ENST00000420539 DCHS1Q96JQ0 3298 aa0.44□□□□□ -2.34
PTP4A1P1-201ENST00000420539 LAMA2P24043 3122 aaKnown RBP0.44□□□□□ -2.34
PTP4A1P1-201ENST00000420539 FREM2Q5SZK8 3169 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms