RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
PTPN22-202ENST00000420377 WNK2Q9Y3S1 2297 aa2.35□□□□□ -2.03
PTPN22-202ENST00000420377 COL7A1Q02388 2944 aa2.35□□□□□ -2.03
PTPN22-202ENST00000420377 A0A1W2PNN7 141 aa2.35□□□□□ -2.03
PTPN22-202ENST00000420377 MMP24-AS1A0A0U1RRL7 71 aa2.35□□□□□ -2.03
PTPN22-202ENST00000420377 C16orf74Q96GX8 76 aa2.35□□□□□ -2.03
PTPN22-202ENST00000420377 RPL37AP61513 92 aaKnown RBP2.34□□□□□ -2.03
PTPN22-202ENST00000420377 SVEP1Q4LDE5 3571 aa2.34□□□□□ -2.03
PTPN22-202ENST00000420377 DNAH5Q8TE73 4624 aa2.34□□□□□ -2.03
PTPN22-202ENST00000420377 IGKV2D-30A0A075B6S6 120 aa2.34□□□□□ -2.03
PTPN22-202ENST00000420377 A0A0G2JQZ4 141 aa2.34□□□□□ -2.03
PTPN22-202ENST00000420377 TNXBP22105 4242 aa2.34□□□□□ -2.04
PTPN22-202ENST00000420377 SPINK13Q1W4C9 94 aa2.33□□□□□ -2.04
PTPN22-202ENST00000420377 NBEAL2Q6ZNJ1 2754 aa2.33□□□□□ -2.04
PTPN22-202ENST00000420377 A0A1B0GUV1 79 aa2.33□□□□□ -2.04
PTPN22-202ENST00000420377 DEFB131AP59861 70 aa2.33□□□□□ -2.04
PTPN22-202ENST00000420377 RHPN1-AS1Q9BWJ2 59 aa2.33□□□□□ -2.04
PTPN22-202ENST00000420377 MYCBP2O75592 4640 aa2.33□□□□□ -2.04
PTPN22-202ENST00000420377 PSORS1C2Q9UIG4 136 aa2.33□□□□□ -2.04
PTPN22-202ENST00000420377 MT1HL1P0DM35 61 aa2.32□□□□□ -2.04
PTPN22-202ENST00000420377 KRTAP10-1P60331 282 aa2.32□□□□□ -2.04
PTPN22-202ENST00000420377 CLPSL2Q6UWE3 100 aa2.32□□□□□ -2.04
PTPN22-202ENST00000420377 KRTAP10-8P60410 259 aa2.32□□□□□ -2.04
PTPN22-202ENST00000420377 H0YAA0 97 aa2.31□□□□□ -2.04
PTPN22-202ENST00000420377 LINC01556Q5JQF7 62 aa2.31□□□□□ -2.04
PTPN22-202ENST00000420377 PRO2289Q9P1D8 64 aa2.31□□□□□ -2.04
PTPN22-202ENST00000420377 KRTAP5-4Q6L8H1 288 aa2.3□□□□□ -2.04
PTPN22-202ENST00000420377 DEFB105AQ8NG35 78 aa2.3□□□□□ -2.04
PTPN22-202ENST00000420377 SPINK6Q6UWN8 80 aa2.3□□□□□ -2.04
PTPN22-202ENST00000420377 TPRXLQ17RH7 258 aa2.29□□□□□ -2.04
PTPN22-202ENST00000420377 Q6ZRX8 168 aa2.29□□□□□ -2.04
PTPN22-202ENST00000420377 CSMD3Q7Z407 3707 aa2.29□□□□□ -2.04
PTPN22-202ENST00000420377 IGFL1Q6UW32 110 aa2.29□□□□□ -2.04
PTPN22-202ENST00000420377 HMCN2Q8NDA2 5059 aa2.28□□□□□ -2.04
PTPN22-202ENST00000420377 UNQ6190/PRO20217Q6UXQ8 127 aa2.28□□□□□ -2.04
PTPN22-202ENST00000420377 CRIPTQ9P021 101 aa2.28□□□□□ -2.04
PTPN22-202ENST00000420377 CRCT1Q9UGL9 99 aa2.28□□□□□ -2.04
PTPN22-202ENST00000420377 KRTAP13-3Q3SY46 172 aa2.27□□□□□ -2.05
PTPN22-202ENST00000420377 HERC1Q15751 4861 aa2.27□□□□□ -2.05
PTPN22-202ENST00000420377 MUC17Q685J3 4493 aa2.27□□□□□ -2.05
PTPN22-202ENST00000420377 MRPL34Q9BQ48 92 aaKnown RBP2.27□□□□□ -2.05
PTPN22-202ENST00000420377 HTN1P15515 57 aa2.26□□□□□ -2.05
PTPN22-202ENST00000420377 SPRR1AP35321 89 aa2.26□□□□□ -2.05
PTPN22-202ENST00000420377 STAB2Q8WWQ8 2551 aa2.26□□□□□ -2.05
PTPN22-202ENST00000420377 PRO0255Q9UI72 69 aa2.26□□□□□ -2.05
PTPN22-202ENST00000420377 LELP1Q5T871 98 aa2.26□□□□□ -2.05
PTPN22-202ENST00000420377 A0A096LPF7 62 aa2.25□□□□□ -2.05
PTPN22-202ENST00000420377 UBR4Q5T4S7 5183 aa2.24□□□□□ -2.05
PTPN22-202ENST00000420377 COX6B2Q6YFQ2 88 aa2.24□□□□□ -2.05
PTPN22-202ENST00000420377 KRTAP1-5Q9BYS1 174 aa2.23□□□□□ -2.05
PTPN22-202ENST00000420377 SPACA4Q8TDM5 124 aa2.22□□□□□ -2.05
PTPN22-202ENST00000420377 R4GN34 69 aa2.22□□□□□ -2.05
PTPN22-202ENST00000420377 H1FX-AS1Q4G0G2 97 aa2.21□□□□□ -2.06
PTPN22-202ENST00000420377 PLAC4Q8WY50 150 aa2.21□□□□□ -2.06
PTPN22-202ENST00000420377 DEFB130BP0DP73 79 aa2.19□□□□□ -2.06
PTPN22-202ENST00000420377 DEFB130AP0DP74 79 aa2.19□□□□□ -2.06
PTPN22-202ENST00000420377 SPRR1BP22528 89 aa2.19□□□□□ -2.06
PTPN22-202ENST00000420377 FLG2Q5D862 2391 aaPredicted RBP2.18□□□□□ -2.06
PTPN22-202ENST00000420377 DEFB4AO15263 64 aa2.18□□□□□ -2.06
PTPN22-202ENST00000420377 SMR3BP02814 79 aaPredicted RBP2.18□□□□□ -2.06
PTPN22-202ENST00000420377 RPL37P61927 97 aaKnown RBP2.17□□□□□ -2.06
PTPN22-202ENST00000420377 NOP10Q9NPE3 64 aaKnown RBP2.17□□□□□ -2.06
PTPN22-202ENST00000420377 INE1O15225 51 aa2.17□□□□□ -2.06
PTPN22-202ENST00000420377 C10orf95Q9H7T3 257 aa2.17□□□□□ -2.06
PTPN22-202ENST00000420377 FAT4Q6V0I7 4981 aa2.16□□□□□ -2.06
PTPN22-202ENST00000420377 DMBT1Q9UGM3 2413 aaPredicted RBP2.16□□□□□ -2.06
PTPN22-202ENST00000420377 TYMSOSQ8TAI1 123 aa2.16□□□□□ -2.06
PTPN22-202ENST00000420377 HTN3P15516 51 aa2.15□□□□□ -2.06
PTPN22-202ENST00000420377 RPS29P62273 56 aaKnown RBP2.13□□□□□ -2.07
PTPN22-202ENST00000420377 RNF213Q63HN8 5207 aa2.12□□□□□ -2.07
PTPN22-202ENST00000420377 KRTAP7-1Q8IUC3 87 aa2.11□□□□□ -2.07
PTPN22-202ENST00000420377 SRRM2Q9UQ35 2752 aaKnown RBP2.11□□□□□ -2.07
PTPN22-202ENST00000420377 PRLHP81277 87 aa2.11□□□□□ -2.07
PTPN22-202ENST00000420377 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
PTPN22-202ENST00000420377 KRTAP12-2P59991 146 aa2.09□□□□□ -2.08
PTPN22-202ENST00000420377 KRTAP6-3Q3LI67 103 aa2.09□□□□□ -2.08
PTPN22-202ENST00000420377 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
PTPN22-202ENST00000420377 LRP1Q07954 4544 aaKnown RBP2.08□□□□□ -2.08
PTPN22-202ENST00000420377 SPINK1P00995 79 aa2.07□□□□□ -2.08
PTPN22-202ENST00000420377 LCE1AQ5T7P2 110 aa2.06□□□□□ -2.08
PTPN22-202ENST00000420377 MUC2Q02817 5179 aa2.06□□□□□ -2.08
PTPN22-202ENST00000420377 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
PTPN22-202ENST00000420377 SSPOA2VEC9 5147 aa2.05□□□□□ -2.08
PTPN22-202ENST00000420377 S4R3F8 94 aa2.04□□□□□ -2.08
PTPN22-202ENST00000420377 KRTAP1-4P0C5Y4 121 aa2.02□□□□□ -2.09
PTPN22-202ENST00000420377 KRTAP10-6P60371 365 aaPredicted RBP2.01□□□□□ -2.09
PTPN22-202ENST00000420377 KRTAP20-1Q3LI63 56 aa2.01□□□□□ -2.09
PTPN22-202ENST00000420377 SPRR5A0A1B0GTR4 108 aa2□□□□□ -2.09
PTPN22-202ENST00000420377 PP632Q6XCG6 107 aa2□□□□□ -2.09
PTPN22-202ENST00000420377 A0A096LNI7 61 aa1.99□□□□□ -2.09
PTPN22-202ENST00000420377 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
PTPN22-202ENST00000420377 KRTAP13-1Q8IUC0 172 aa1.98□□□□□ -2.09
PTPN22-202ENST00000420377 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
PTPN22-202ENST00000420377 KRTAP13-4Q3LI77 160 aa1.97□□□□□ -2.09
PTPN22-202ENST00000420377 MT1HP80294 61 aa1.97□□□□□ -2.09
PTPN22-202ENST00000420377 KRTAP19-6Q3LI70 58 aa1.97□□□□□ -2.09
PTPN22-202ENST00000420377 A0A0D9SG42 100 aa1.96□□□□□ -2.1
PTPN22-202ENST00000420377 KRTAP19-2Q3LHN2 52 aa1.96□□□□□ -2.1
PTPN22-202ENST00000420377 KRTAP12-1P59990 96 aa1.95□□□□□ -2.1
PTPN22-202ENST00000420377 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms