RNA–Protein interactions for RNA: ENST00000419810.6

HPCAL1-203, Transcript of hippocalcin like 1, humanhuman

TSL 1 (best)

Gene HPCAL1, Length 4,781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPCAL1-203ENST00000419810 KRTAP23-1A1A580 65 aa5.91□□□□□ -1.46
HPCAL1-203ENST00000419810 PRKDCP78527 4128 aaKnown RBP5.83□□□□□ -1.48
HPCAL1-203ENST00000419810 DNAH5Q8TE73 4624 aa5.83□□□□□ -1.48
HPCAL1-203ENST00000419810 KRTAP10-12P60413 245 aa5.79□□□□□ -1.48
HPCAL1-203ENST00000419810 LORP23490 312 aaPredicted RBP5.78□□□□□ -1.48
HPCAL1-203ENST00000419810 KIAA1109Q2LD37 5005 aa5.78□□□□□ -1.48
HPCAL1-203ENST00000419810 RYR1P21817 5038 aa5.77□□□□□ -1.49
HPCAL1-203ENST00000419810 PLECQ15149 4684 aaKnown RBP5.76□□□□□ -1.49
HPCAL1-203ENST00000419810 KRTAP12-3P60328 96 aa5.72□□□□□ -1.49
HPCAL1-203ENST00000419810 LCE3AQ5TA76 89 aa5.7□□□□□ -1.5
HPCAL1-203ENST00000419810 ALMS1Q8TCU4 4167 aa5.68□□□□□ -1.5
HPCAL1-203ENST00000419810 RYR3Q15413 4870 aa5.67□□□□□ -1.5
HPCAL1-203ENST00000419810 DNAH11Q96DT5 4516 aa5.67□□□□□ -1.5
HPCAL1-203ENST00000419810 FAT1Q14517 4588 aa5.66□□□□□ -1.5
HPCAL1-203ENST00000419810 ANK2Q01484 3957 aa5.65□□□□□ -1.51
HPCAL1-203ENST00000419810 STARD9Q9P2P6 4700 aa5.63□□□□□ -1.51
HPCAL1-203ENST00000419810 DYNC1H1Q14204 4646 aaKnown RBP5.63□□□□□ -1.51
HPCAL1-203ENST00000419810 DNAH1Q9P2D7 4330 aa5.62□□□□□ -1.51
HPCAL1-203ENST00000419810 HYDINQ4G0P3 5121 aa5.61□□□□□ -1.51
HPCAL1-203ENST00000419810 DNAH10Q8IVF4 4471 aa5.59□□□□□ -1.51
HPCAL1-203ENST00000419810 CMYA5Q8N3K9 4069 aa5.56□□□□□ -1.52
HPCAL1-203ENST00000419810 LRP1BQ9NZR2 4599 aa5.55□□□□□ -1.52
HPCAL1-203ENST00000419810 DNAH17Q9UFH2 4485 aa5.51□□□□□ -1.53
HPCAL1-203ENST00000419810 VPS13DQ5THJ4 4388 aa5.49□□□□□ -1.53
HPCAL1-203ENST00000419810 BIRC6Q9NR09 4857 aa5.49□□□□□ -1.53
HPCAL1-203ENST00000419810 KRTAP17-1Q9BYP8 105 aa5.49□□□□□ -1.53
HPCAL1-203ENST00000419810 HERC2O95714 4834 aa5.48□□□□□ -1.53
HPCAL1-203ENST00000419810 LYSTQ99698 3801 aa5.46□□□□□ -1.54
HPCAL1-203ENST00000419810 DNAH2Q9P225 4427 aa5.45□□□□□ -1.54
HPCAL1-203ENST00000419810 DNAH3Q8TD57 4116 aa5.41□□□□□ -1.54
HPCAL1-203ENST00000419810 DNAH8Q96JB1 4490 aa5.41□□□□□ -1.54
HPCAL1-203ENST00000419810 CRCT1Q9UGL9 99 aa5.41□□□□□ -1.54
HPCAL1-203ENST00000419810 KMT2AQ03164 3969 aa5.4□□□□□ -1.54
HPCAL1-203ENST00000419810 RYR2Q92736 4967 aa5.39□□□□□ -1.55
HPCAL1-203ENST00000419810 KRTAP4-1Q9BYQ7 146 aa5.38□□□□□ -1.55
HPCAL1-203ENST00000419810 KMT2CQ8NEZ4 4911 aaKnown RBP5.38□□□□□ -1.55
HPCAL1-203ENST00000419810 SACSQ9NZJ4 4579 aa5.38□□□□□ -1.55
HPCAL1-203ENST00000419810 FAT2Q9NYQ8 4349 aa5.33□□□□□ -1.56
HPCAL1-203ENST00000419810 VPS13BQ7Z7G8 4022 aa5.3□□□□□ -1.56
HPCAL1-203ENST00000419810 DNAH7Q8WXX0 4024 aa5.3□□□□□ -1.56
HPCAL1-203ENST00000419810 APOBP04114 4563 aaKnown RBP5.3□□□□□ -1.56
HPCAL1-203ENST00000419810 SPRR2GQ9BYE4 73 aa5.3□□□□□ -1.56
HPCAL1-203ENST00000419810 FAT3Q8TDW7 4589 aa5.28□□□□□ -1.56
HPCAL1-203ENST00000419810 MYCBP2O75592 4640 aa5.27□□□□□ -1.57
HPCAL1-203ENST00000419810 PCLOQ9Y6V0 5065 aa5.25□□□□□ -1.57
HPCAL1-203ENST00000419810 LRP1Q07954 4544 aaKnown RBP5.23□□□□□ -1.57
HPCAL1-203ENST00000419810 DYNC2H1Q8NCM8 4307 aaKnown RBP5.22□□□□□ -1.57
HPCAL1-203ENST00000419810 KRTAP10-5P60370 271 aa5.22□□□□□ -1.57
HPCAL1-203ENST00000419810 KRTAP8-1Q8IUC2 63 aa5.19□□□□□ -1.58
HPCAL1-203ENST00000419810 MT1HP80294 61 aa5.19□□□□□ -1.58
HPCAL1-203ENST00000419810 EPPK1P58107 5090 aaKnown RBP5.18□□□□□ -1.58
HPCAL1-203ENST00000419810 MT2AP02795 61 aa5.17□□□□□ -1.58
HPCAL1-203ENST00000419810 LRP2P98164 4655 aa5.13□□□□□ -1.59
HPCAL1-203ENST00000419810 DNAH6Q9C0G6 4158 aa5.09□□□□□ -1.59
HPCAL1-203ENST00000419810 LCE3CQ5T5A8 94 aa5.08□□□□□ -1.6
HPCAL1-203ENST00000419810 MT1FP04733 61 aa5.07□□□□□ -1.6
HPCAL1-203ENST00000419810 PKHD1P08F94 4074 aa5.07□□□□□ -1.6
HPCAL1-203ENST00000419810 FRAS1Q86XX4 4008 aa5.06□□□□□ -1.6
HPCAL1-203ENST00000419810 KRTAP19-5Q3LI72 72 aa5.05□□□□□ -1.6
HPCAL1-203ENST00000419810 HECTD4Q9Y4D8 3996 aa5.04□□□□□ -1.6
HPCAL1-203ENST00000419810 HSPG2P98160 4391 aa5.03□□□□□ -1.6
HPCAL1-203ENST00000419810 SPRR5A0A1B0GTR4 108 aa5.03□□□□□ -1.6
HPCAL1-203ENST00000419810 ABCA13Q86UQ4 5058 aa5.02□□□□□ -1.61
HPCAL1-203ENST00000419810 HERC1Q15751 4861 aa4.98□□□□□ -1.61
HPCAL1-203ENST00000419810 UBR4Q5T4S7 5183 aa4.96□□□□□ -1.62
HPCAL1-203ENST00000419810 KRTAP19-4Q3LI73 84 aa4.96□□□□□ -1.62
HPCAL1-203ENST00000419810 KRTAP19-1Q8IUB9 90 aa4.96□□□□□ -1.62
HPCAL1-203ENST00000419810 FSIP2Q5CZC0 6907 aa4.94□□□□□ -1.62
HPCAL1-203ENST00000419810 KRTAP19-8Q3LI54 63 aa4.91□□□□□ -1.62
HPCAL1-203ENST00000419810 KRTAP10-7P60409 375 aaPredicted RBP4.87□□□□□ -1.63
HPCAL1-203ENST00000419810 PKD1P98161 4303 aa4.82□□□□□ -1.64
HPCAL1-203ENST00000419810 MT1XP80297 61 aa4.81□□□□□ -1.64
HPCAL1-203ENST00000419810 SPRR2FQ96RM1 72 aa4.74□□□□□ -1.65
HPCAL1-203ENST00000419810 LPAP08519 4548 aa4.73□□□□□ -1.65
HPCAL1-203ENST00000419810 KRTAP9-2Q9BYQ4 174 aa4.73□□□□□ -1.65
HPCAL1-203ENST00000419810 RNF213Q63HN8 5207 aa4.73□□□□□ -1.65
HPCAL1-203ENST00000419810 MT1BP07438 61 aa4.73□□□□□ -1.65
HPCAL1-203ENST00000419810 LCE2CQ5TA81 110 aa4.7□□□□□ -1.66
HPCAL1-203ENST00000419810 PKHD1L1Q86WI1 4243 aa4.67□□□□□ -1.66
HPCAL1-203ENST00000419810 KRTAP12-4P60329 112 aa4.66□□□□□ -1.66
HPCAL1-203ENST00000419810 KRTAP9-8Q9BYQ0 159 aa4.65□□□□□ -1.67
HPCAL1-203ENST00000419810 FAT4Q6V0I7 4981 aa4.58□□□□□ -1.68
HPCAL1-203ENST00000419810 KRTAP9-6A0A140TA67 174 aa4.55□□□□□ -1.68
HPCAL1-203ENST00000419810 LCE3BQ5TA77 95 aa4.54□□□□□ -1.68
HPCAL1-203ENST00000419810 KRTAP4-8A0A0G2JLE6 195 aa4.54□□□□□ -1.68
HPCAL1-203ENST00000419810 KRTAP4-8Q9BYQ9 185 aa4.54□□□□□ -1.68
HPCAL1-203ENST00000419810 MT1GP13640 62 aa4.53□□□□□ -1.68
HPCAL1-203ENST00000419810 HMCN2Q8NDA2 5059 aa4.53□□□□□ -1.68
HPCAL1-203ENST00000419810 KRTAP9-3Q9BYQ3 159 aa4.52□□□□□ -1.69
HPCAL1-203ENST00000419810 SPRR2EP22531 72 aa4.5□□□□□ -1.69
HPCAL1-203ENST00000419810 SPRR2BP35325 72 aa4.5□□□□□ -1.69
HPCAL1-203ENST00000419810 SPRR2AP35326 72 aa4.5□□□□□ -1.69
HPCAL1-203ENST00000419810 KRTAP19-2Q3LHN2 52 aa4.5□□□□□ -1.69
HPCAL1-203ENST00000419810 LCE2AQ5TA79 106 aaPredicted RBP4.5□□□□□ -1.69
HPCAL1-203ENST00000419810 LCE2BO14633 110 aa4.45□□□□□ -1.7
HPCAL1-203ENST00000419810 MUC2Q02817 5179 aa4.43□□□□□ -1.7
HPCAL1-203ENST00000419810 MUC17Q685J3 4493 aa4.42□□□□□ -1.7
HPCAL1-203ENST00000419810 TNXBP22105 4242 aa4.41□□□□□ -1.7
HPCAL1-203ENST00000419810 LCE3DQ9BYE3 92 aa4.39□□□□□ -1.71
HPCAL1-203ENST00000419810 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms