RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 GAFA1Q96PS6 74 aa-0.36□□□□□ -2.47
TRAPPC13-203ENST00000415825 UBL5Q9BZL1 73 aa-0.36□□□□□ -2.47
TRAPPC13-203ENST00000415825 KCNQ1DNQ9H478 68 aa-0.36□□□□□ -2.47
TRAPPC13-203ENST00000415825 RABAC1Q9UI14 185 aa-0.36□□□□□ -2.47
TRAPPC13-203ENST00000415825 VCANP13611 3396 aa-0.36□□□□□ -2.47
TRAPPC13-203ENST00000415825 AKAP12Q02952 1782 aa-0.37□□□□□ -2.47
TRAPPC13-203ENST00000415825 AGLP35573 1532 aa-0.37□□□□□ -2.47
TRAPPC13-203ENST00000415825 USP34Q70CQ2 3546 aa-0.37□□□□□ -2.47
TRAPPC13-203ENST00000415825 VPS13AQ96RL7 3174 aa-0.37□□□□□ -2.47
TRAPPC13-203ENST00000415825 IQCF6A8MYZ5 107 aa-0.37□□□□□ -2.47
TRAPPC13-203ENST00000415825 GNGT2O14610 69 aa-0.37□□□□□ -2.47
TRAPPC13-203ENST00000415825 HMGN2P05204 90 aaKnown RBP-0.37□□□□□ -2.47
TRAPPC13-203ENST00000415825 RPS27P42677 84 aaKnown RBP-0.37□□□□□ -2.47
TRAPPC13-203ENST00000415825 NCMAPQ5T1S8 102 aa-0.37□□□□□ -2.47
TRAPPC13-203ENST00000415825 RPS27LQ71UM5 84 aaKnown RBP-0.37□□□□□ -2.47
TRAPPC13-203ENST00000415825 RB1CC1Q8TDY2 1594 aa-0.37□□□□□ -2.47
TRAPPC13-203ENST00000415825 ABCC1P33527 1531 aa-0.38□□□□□ -2.47
TRAPPC13-203ENST00000415825 DUOX2Q9NRD8 1548 aa-0.38□□□□□ -2.47
TRAPPC13-203ENST00000415825 SCRIBQ14160 1630 aa-0.38□□□□□ -2.47
TRAPPC13-203ENST00000415825 NDUFA4O00483 81 aa-0.38□□□□□ -2.47
TRAPPC13-203ENST00000415825 GYPAP02724 150 aa-0.38□□□□□ -2.47
TRAPPC13-203ENST00000415825 RBP2P50120 134 aa-0.38□□□□□ -2.47
TRAPPC13-203ENST00000415825 PEA15Q15121 130 aa-0.38□□□□□ -2.47
TRAPPC13-203ENST00000415825 MINOS1Q5TGZ0 78 aa-0.38□□□□□ -2.47
TRAPPC13-203ENST00000415825 WFDC9Q8NEX5 89 aa-0.38□□□□□ -2.47
TRAPPC13-203ENST00000415825 TMEM203Q969S6 136 aa-0.38□□□□□ -2.47
TRAPPC13-203ENST00000415825 C14orf144Q96I85 54 aa-0.38□□□□□ -2.47
TRAPPC13-203ENST00000415825 PMCHL2Q9BQD1 86 aa-0.38□□□□□ -2.47
TRAPPC13-203ENST00000415825 C6orf48Q9UBA6 75 aa-0.38□□□□□ -2.47
TRAPPC13-203ENST00000415825 GLI2P10070 1586 aa-0.38□□□□□ -2.47
TRAPPC13-203ENST00000415825 ALS2Q96Q42 1657 aa-0.38□□□□□ -2.47
TRAPPC13-203ENST00000415825 CDH23Q9H251 3354 aa-0.38□□□□□ -2.47
TRAPPC13-203ENST00000415825 NRXN3Q9Y4C0 1643 aa-0.38□□□□□ -2.47
TRAPPC13-203ENST00000415825 ANKARQ7Z5J8 1434 aa-0.38□□□□□ -2.47
TRAPPC13-203ENST00000415825 UGGT1Q9NYU2 1555 aa-0.39□□□□□ -2.47
TRAPPC13-203ENST00000415825 TRAV21A0A0B4J279 112 aa-0.39□□□□□ -2.47
TRAPPC13-203ENST00000415825 MYMXA0A1B0GTQ4 84 aa-0.39□□□□□ -2.47
TRAPPC13-203ENST00000415825 UMAD1C9J7I0 102 aa-0.39□□□□□ -2.47
TRAPPC13-203ENST00000415825 DEFB131AP59861 70 aa-0.39□□□□□ -2.47
TRAPPC13-203ENST00000415825 SNRPFP62306 86 aaKnown RBP-0.39□□□□□ -2.47
TRAPPC13-203ENST00000415825 GTF2H5Q6ZYL4 71 aa-0.39□□□□□ -2.47
TRAPPC13-203ENST00000415825 ABCA5Q8WWZ7 1642 aa-0.39□□□□□ -2.47
TRAPPC13-203ENST00000415825 XIRP2A4UGR9 3374 aa-0.39□□□□□ -2.47
TRAPPC13-203ENST00000415825 ABCC6O95255 1503 aa-0.39□□□□□ -2.47
TRAPPC13-203ENST00000415825 UACAQ9BZF9 1416 aa-0.39□□□□□ -2.47
TRAPPC13-203ENST00000415825 DNAH14Q0VDD8 3507 aa-0.39□□□□□ -2.47
TRAPPC13-203ENST00000415825 CCDC18Q5T9S5 1454 aa-0.4□□□□□ -2.47
TRAPPC13-203ENST00000415825 ETDCA0A1B0GVM5 59 aa-0.4□□□□□ -2.47
TRAPPC13-203ENST00000415825 C20orf202A1L168 122 aa-0.4□□□□□ -2.47
TRAPPC13-203ENST00000415825 CEBPZOSA8MTT3 80 aa-0.4□□□□□ -2.47
TRAPPC13-203ENST00000415825 ATP6V1G2-DDX39BF2Z307 99 aa-0.4□□□□□ -2.47
TRAPPC13-203ENST00000415825 K7EMI3 77 aa-0.4□□□□□ -2.47
TRAPPC13-203ENST00000415825 S100A10P60903 97 aa-0.4□□□□□ -2.47
TRAPPC13-203ENST00000415825 NREPQ16612 68 aa-0.4□□□□□ -2.47
TRAPPC13-203ENST00000415825 LINC00643Q86TS7 51 aa-0.4□□□□□ -2.47
TRAPPC13-203ENST00000415825 C20orf78Q9BR46 151 aa-0.4□□□□□ -2.47
TRAPPC13-203ENST00000415825 TMEM167BQ9NRX6 74 aa-0.4□□□□□ -2.47
TRAPPC13-203ENST00000415825 ABRACLQ9P1F3 81 aa-0.4□□□□□ -2.47
TRAPPC13-203ENST00000415825 BRCA2P51587 3418 aa-0.4□□□□□ -2.47
TRAPPC13-203ENST00000415825 VPS8Q8N3P4 1428 aa-0.4□□□□□ -2.47
TRAPPC13-203ENST00000415825 ASPMQ8IZT6 3477 aa-0.4□□□□□ -2.47
TRAPPC13-203ENST00000415825 CLTCL1P53675 1640 aa-0.41□□□□□ -2.47
TRAPPC13-203ENST00000415825 ABCA6Q8N139 1617 aa-0.41□□□□□ -2.47
TRAPPC13-203ENST00000415825 TRPM2O94759 1503 aa-0.41□□□□□ -2.48
TRAPPC13-203ENST00000415825 DCAF1Q9Y4B6 1507 aa-0.41□□□□□ -2.48
TRAPPC13-203ENST00000415825 KANTRA0A1W2PQU2 76 aa-0.41□□□□□ -2.48
TRAPPC13-203ENST00000415825 S100A8P05109 93 aa-0.41□□□□□ -2.48
TRAPPC13-203ENST00000415825 FCER1GP30273 86 aa-0.41□□□□□ -2.48
TRAPPC13-203ENST00000415825 SERF2P84101 59 aa-0.41□□□□□ -2.48
TRAPPC13-203ENST00000415825 COL5A1-AS1Q5SY13 56 aa-0.41□□□□□ -2.48
TRAPPC13-203ENST00000415825 S100ZQ8WXG8 99 aa-0.41□□□□□ -2.48
TRAPPC13-203ENST00000415825 ADCY10Q96PN6 1610 aa-0.42□□□□□ -2.48
TRAPPC13-203ENST00000415825 SMIM27A0A1W2PRY6 76 aa-0.42□□□□□ -2.48
TRAPPC13-203ENST00000415825 SFTA3P0C7M3 94 aa-0.42□□□□□ -2.48
TRAPPC13-203ENST00000415825 CD52P31358 61 aa-0.42□□□□□ -2.48
TRAPPC13-203ENST00000415825 DEFB121Q5J5C9 76 aa-0.42□□□□□ -2.48
TRAPPC13-203ENST00000415825 ABCA8O94911 1581 aa-0.42□□□□□ -2.48
TRAPPC13-203ENST00000415825 NFAT5O94916 1531 aa-0.43□□□□□ -2.48
TRAPPC13-203ENST00000415825 SYCP2Q9BX26 1530 aa-0.43□□□□□ -2.48
TRAPPC13-203ENST00000415825 CNTLNQ9NXG0 1405 aa-0.43□□□□□ -2.48
TRAPPC13-203ENST00000415825 FAUP35544 74 aaKnown RBP-0.43□□□□□ -2.48
TRAPPC13-203ENST00000415825 PYY3Q5JQD4 70 aa-0.43□□□□□ -2.48
TRAPPC13-203ENST00000415825 TCEAL7Q9BRU2 100 aa-0.43□□□□□ -2.48
TRAPPC13-203ENST00000415825 NMES1Q9C002 83 aa-0.43□□□□□ -2.48
TRAPPC13-203ENST00000415825 ABCA10Q8WWZ4 1543 aa-0.43□□□□□ -2.48
TRAPPC13-203ENST00000415825 SAMD9LQ8IVG5 1584 aa-0.44□□□□□ -2.48
TRAPPC13-203ENST00000415825 PEG3Q9GZU2 1588 aa-0.44□□□□□ -2.48
TRAPPC13-203ENST00000415825 IQGAP3Q86VI3 1631 aa-0.44□□□□□ -2.48
TRAPPC13-203ENST00000415825 A0A087WXM4 84 aa-0.44□□□□□ -2.48
TRAPPC13-203ENST00000415825 CRIP1P50238 77 aa-0.44□□□□□ -2.48
TRAPPC13-203ENST00000415825 POLR2KP53803 58 aaKnown RBP-0.44□□□□□ -2.48
TRAPPC13-203ENST00000415825 NCBP2-AS2Q69YL0 99 aa-0.44□□□□□ -2.48
TRAPPC13-203ENST00000415825 RHPN1-AS1Q9BWJ2 59 aa-0.44□□□□□ -2.48
TRAPPC13-203ENST00000415825 PRXQ9BXM0 1461 aa-0.44□□□□□ -2.48
TRAPPC13-203ENST00000415825 EFCAB6Q5THR3 1501 aa-0.44□□□□□ -2.48
TRAPPC13-203ENST00000415825 UGGT2Q9NYU1 1516 aa-0.44□□□□□ -2.48
TRAPPC13-203ENST00000415825 GOLGB1Q14789 3259 aaKnown RBP-0.44□□□□□ -2.48
TRAPPC13-203ENST00000415825 ABCC8Q09428 1581 aa-0.45□□□□□ -2.48
TRAPPC13-203ENST00000415825 UTRNP46939 3433 aa-0.45□□□□□ -2.48
TRAPPC13-203ENST00000415825 ABCA9Q8IUA7 1624 aa-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms