RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 P0C880 135 aa5.68□□□□□ -1.5
LINC01888-201ENST00000415138 KRTAP10-4P60372 401 aaPredicted RBP5.68□□□□□ -1.5
LINC01888-201ENST00000415138 APOBP04114 4563 aaKnown RBP5.67□□□□□ -1.5
LINC01888-201ENST00000415138 Q8N377 158 aa5.67□□□□□ -1.5
LINC01888-201ENST00000415138 PRLHP81277 87 aa5.66□□□□□ -1.5
LINC01888-201ENST00000415138 ABCA13Q86UQ4 5058 aa5.65□□□□□ -1.5
LINC01888-201ENST00000415138 C20orf166-AS1Q96NR2 134 aa5.65□□□□□ -1.5
LINC01888-201ENST00000415138 ACYP2P14621 99 aa5.64□□□□□ -1.51
LINC01888-201ENST00000415138 HSPG2P98160 4391 aa5.64□□□□□ -1.51
LINC01888-201ENST00000415138 SPRR1AP35321 89 aa5.63□□□□□ -1.51
LINC01888-201ENST00000415138 LUZP6Q538Z0 58 aa5.62□□□□□ -1.51
LINC01888-201ENST00000415138 PCOTHQ58A44 107 aa5.61□□□□□ -1.51
LINC01888-201ENST00000415138 Q6ZRX8 168 aa5.61□□□□□ -1.51
LINC01888-201ENST00000415138 KRTAP13-1Q8IUC0 172 aa5.6□□□□□ -1.51
LINC01888-201ENST00000415138 IGLV8-61A0A075B6I0 122 aa5.59□□□□□ -1.51
LINC01888-201ENST00000415138 A8MUU9 505 aa5.59□□□□□ -1.51
LINC01888-201ENST00000415138 KRTAP4-16G5E9R7 235 aaPredicted RBP5.59□□□□□ -1.51
LINC01888-201ENST00000415138 C8orf17Q9NRJ1 99 aa5.59□□□□□ -1.51
LINC01888-201ENST00000415138 SRRM2Q9UQ35 2752 aaKnown RBP5.58□□□□□ -1.52
LINC01888-201ENST00000415138 MMP24-AS1A0A0U1RRL7 71 aa5.56□□□□□ -1.52
LINC01888-201ENST00000415138 UBR4Q5T4S7 5183 aa5.56□□□□□ -1.52
LINC01888-201ENST00000415138 TYMSOSQ8TAI1 123 aa5.55□□□□□ -1.52
LINC01888-201ENST00000415138 DEFB116Q30KQ4 102 aa5.54□□□□□ -1.52
LINC01888-201ENST00000415138 DEFB105AQ8NG35 78 aa5.54□□□□□ -1.52
LINC01888-201ENST00000415138 LINC00472Q9H8W2 130 aa5.54□□□□□ -1.52
LINC01888-201ENST00000415138 ANAPC11Q9NYG5 84 aa5.54□□□□□ -1.52
LINC01888-201ENST00000415138 VPS13BQ7Z7G8 4022 aa5.54□□□□□ -1.52
LINC01888-201ENST00000415138 KRTAP1-4P0C5Y4 121 aa5.53□□□□□ -1.52
LINC01888-201ENST00000415138 Q5W150 140 aa5.53□□□□□ -1.52
LINC01888-201ENST00000415138 FLG2Q5D862 2391 aaPredicted RBP5.53□□□□□ -1.52
LINC01888-201ENST00000415138 FAT1Q14517 4588 aa5.53□□□□□ -1.52
LINC01888-201ENST00000415138 KRTAP10-8P60410 259 aa5.52□□□□□ -1.53
LINC01888-201ENST00000415138 HERC1Q15751 4861 aa5.51□□□□□ -1.53
LINC01888-201ENST00000415138 NDUFAF8A1L188 74 aa5.51□□□□□ -1.53
LINC01888-201ENST00000415138 IGFL1Q6UW32 110 aa5.49□□□□□ -1.53
LINC01888-201ENST00000415138 MT1HL1P0DM35 61 aa5.48□□□□□ -1.53
LINC01888-201ENST00000415138 SPRR1BP22528 89 aa5.47□□□□□ -1.53
LINC01888-201ENST00000415138 SSBP3-AS1Q7Z2R9 100 aa5.47□□□□□ -1.53
LINC01888-201ENST00000415138 PKHD1L1Q86WI1 4243 aa5.47□□□□□ -1.53
LINC01888-201ENST00000415138 KRTAP13-2Q52LG2 175 aa5.46□□□□□ -1.54
LINC01888-201ENST00000415138 SPINT4Q6UDR6 99 aa5.46□□□□□ -1.54
LINC01888-201ENST00000415138 LINC00304Q8N9R0 145 aa5.46□□□□□ -1.54
LINC01888-201ENST00000415138 SPINK1P00995 79 aa5.41□□□□□ -1.54
LINC01888-201ENST00000415138 LCE1AQ5T7P2 110 aa5.41□□□□□ -1.54
LINC01888-201ENST00000415138 IGKV2-30P06310 120 aa5.4□□□□□ -1.54
LINC01888-201ENST00000415138 MRPL34Q9BQ48 92 aaKnown RBP5.39□□□□□ -1.55
LINC01888-201ENST00000415138 DMBT1Q9UGM3 2413 aaPredicted RBP5.38□□□□□ -1.55
LINC01888-201ENST00000415138 LRP1Q07954 4544 aaKnown RBP5.35□□□□□ -1.55
LINC01888-201ENST00000415138 RPS29P62273 56 aaKnown RBP5.35□□□□□ -1.55
LINC01888-201ENST00000415138 FAT3Q8TDW7 4589 aa5.35□□□□□ -1.55
LINC01888-201ENST00000415138 CAMK2N1Q7Z7J9 78 aa5.34□□□□□ -1.55
LINC01888-201ENST00000415138 MYCBP2O75592 4640 aa5.33□□□□□ -1.56
LINC01888-201ENST00000415138 A0A1B0GVX0 72 aa5.33□□□□□ -1.56
LINC01888-201ENST00000415138 KRTAP13-3Q3SY46 172 aa5.32□□□□□ -1.56
LINC01888-201ENST00000415138 Q96NJ1 140 aa5.32□□□□□ -1.56
LINC01888-201ENST00000415138 A0A0G2JQZ4 141 aa5.31□□□□□ -1.56
LINC01888-201ENST00000415138 TNXBP22105 4242 aa5.27□□□□□ -1.57
LINC01888-201ENST00000415138 H0YAA0 97 aa5.26□□□□□ -1.57
LINC01888-201ENST00000415138 TPRXLQ17RH7 258 aa5.2□□□□□ -1.58
LINC01888-201ENST00000415138 IGKV2D-30A0A075B6S6 120 aa5.18□□□□□ -1.58
LINC01888-201ENST00000415138 COX6B2Q6YFQ2 88 aa5.17□□□□□ -1.58
LINC01888-201ENST00000415138 C9orf92A6NGG3 77 aa5.16□□□□□ -1.58
LINC01888-201ENST00000415138 A0A1B0GU33 70 aa5.15□□□□□ -1.59
LINC01888-201ENST00000415138 H1FX-AS1Q4G0G2 97 aa5.15□□□□□ -1.59
LINC01888-201ENST00000415138 HMCN2Q8NDA2 5059 aa5.09□□□□□ -1.59
LINC01888-201ENST00000415138 CRIPTQ9P021 101 aa5.08□□□□□ -1.6
LINC01888-201ENST00000415138 KRTAP2-2Q9BYT5 123 aa5.06□□□□□ -1.6
LINC01888-201ENST00000415138 RNF213Q63HN8 5207 aa5.04□□□□□ -1.6
LINC01888-201ENST00000415138 KRTAP10-7P60409 375 aaPredicted RBP5.04□□□□□ -1.6
LINC01888-201ENST00000415138 RPL37P61927 97 aaKnown RBP5.02□□□□□ -1.61
LINC01888-201ENST00000415138 LPAP08519 4548 aa5.02□□□□□ -1.61
LINC01888-201ENST00000415138 KRTAP10-6P60371 365 aaPredicted RBP5□□□□□ -1.61
LINC01888-201ENST00000415138 PRO2289Q9P1D8 64 aa4.94□□□□□ -1.62
LINC01888-201ENST00000415138 LRP2P98164 4655 aa4.93□□□□□ -1.62
LINC01888-201ENST00000415138 PLAC4Q8WY50 150 aa4.9□□□□□ -1.63
LINC01888-201ENST00000415138 KRTAP5-11Q6L8G4 156 aa4.87□□□□□ -1.63
LINC01888-201ENST00000415138 KRTAP4-1Q9BYQ7 146 aa4.86□□□□□ -1.63
LINC01888-201ENST00000415138 C10orf95Q9H7T3 257 aa4.86□□□□□ -1.63
LINC01888-201ENST00000415138 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.85□□□□□ -1.63
LINC01888-201ENST00000415138 MUC17Q685J3 4493 aa4.84□□□□□ -1.63
LINC01888-201ENST00000415138 MT3P25713 68 aa4.78□□□□□ -1.64
LINC01888-201ENST00000415138 LCE1EQ5T753 118 aa4.77□□□□□ -1.65
LINC01888-201ENST00000415138 FAT4Q6V0I7 4981 aa4.76□□□□□ -1.65
LINC01888-201ENST00000415138 INE1O15225 51 aa4.75□□□□□ -1.65
LINC01888-201ENST00000415138 S4R3F8 94 aa4.74□□□□□ -1.65
LINC01888-201ENST00000415138 M0R2T5 61 aa4.73□□□□□ -1.65
LINC01888-201ENST00000415138 MUC2Q02817 5179 aa4.72□□□□□ -1.65
LINC01888-201ENST00000415138 KRTAP19-2Q3LHN2 52 aa4.68□□□□□ -1.66
LINC01888-201ENST00000415138 MT1HP80294 61 aa4.65□□□□□ -1.67
LINC01888-201ENST00000415138 R4GN34 69 aa4.65□□□□□ -1.67
LINC01888-201ENST00000415138 CRCT1Q9UGL9 99 aa4.63□□□□□ -1.67
LINC01888-201ENST00000415138 FSIP2Q5CZC0 6907 aa4.62□□□□□ -1.67
LINC01888-201ENST00000415138 PP632Q6XCG6 107 aa4.61□□□□□ -1.67
LINC01888-201ENST00000415138 A0A0D9SG42 100 aa4.59□□□□□ -1.67
LINC01888-201ENST00000415138 KRTAP12-2P59991 146 aa4.58□□□□□ -1.68
LINC01888-201ENST00000415138 KRTAP13-4Q3LI77 160 aa4.56□□□□□ -1.68
LINC01888-201ENST00000415138 KRTAP12-1P59990 96 aa4.54□□□□□ -1.68
LINC01888-201ENST00000415138 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
LINC01888-201ENST00000415138 M0QZ58 72 aa4.47□□□□□ -1.69
LINC01888-201ENST00000415138 FLGP20930 4061 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms