RNA–Protein interactions for RNA: ENST00000412845.1

NEFHP1-201, Transcript of neurofilament heavy pseudogene 1, humanhuman

BASIC

Gene NEFHP1, Length 2,629 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFHP1-201ENST00000412845 FAT3Q8TDW7 4589 aa9.66□□□□□ -0.86
NEFHP1-201ENST00000412845 HSPG2P98160 4391 aa9.65□□□□□ -0.87
NEFHP1-201ENST00000412845 A0A0D9SG42 100 aa9.65□□□□□ -0.87
NEFHP1-201ENST00000412845 LRP1Q07954 4544 aaKnown RBP9.64□□□□□ -0.87
NEFHP1-201ENST00000412845 KRTAP3-2Q9BYR7 98 aa9.63□□□□□ -0.87
NEFHP1-201ENST00000412845 RPL37P61927 97 aaKnown RBP9.63□□□□□ -0.87
NEFHP1-201ENST00000412845 KRTAP10-8P60410 259 aa9.61□□□□□ -0.87
NEFHP1-201ENST00000412845 TNXBP22105 4242 aa9.59□□□□□ -0.87
NEFHP1-201ENST00000412845 MYCBP2O75592 4640 aa9.53□□□□□ -0.88
NEFHP1-201ENST00000412845 P0C880 135 aa9.52□□□□□ -0.88
NEFHP1-201ENST00000412845 S4R3F8 94 aa9.52□□□□□ -0.88
NEFHP1-201ENST00000412845 TPRXLQ17RH7 258 aa9.51□□□□□ -0.89
NEFHP1-201ENST00000412845 XP32Q5T750 250 aa9.48□□□□□ -0.89
NEFHP1-201ENST00000412845 RYR2Q92736 4967 aa9.47□□□□□ -0.89
NEFHP1-201ENST00000412845 C10orf95Q9H7T3 257 aa9.45□□□□□ -0.9
NEFHP1-201ENST00000412845 KRTAP12-2P59991 146 aa9.39□□□□□ -0.91
NEFHP1-201ENST00000412845 KMT2CQ8NEZ4 4911 aaKnown RBP9.37□□□□□ -0.91
NEFHP1-201ENST00000412845 SPINT4Q6UDR6 99 aa9.33□□□□□ -0.92
NEFHP1-201ENST00000412845 Q5VSD8 79 aa9.31□□□□□ -0.92
NEFHP1-201ENST00000412845 LPAP08519 4548 aa9.29□□□□□ -0.92
NEFHP1-201ENST00000412845 KRTAP12-1P59990 96 aa9.28□□□□□ -0.92
NEFHP1-201ENST00000412845 KRTAP17-1Q9BYP8 105 aa9.23□□□□□ -0.93
NEFHP1-201ENST00000412845 KRTAP21-3Q3LHN1 58 aa9.17□□□□□ -0.94
NEFHP1-201ENST00000412845 LRP2P98164 4655 aa9.17□□□□□ -0.94
NEFHP1-201ENST00000412845 RYR1P21817 5038 aa9.16□□□□□ -0.94
NEFHP1-201ENST00000412845 KRTAP15-1Q3LI76 137 aa9.15□□□□□ -0.94
NEFHP1-201ENST00000412845 MT1HL1P0DM35 61 aa9.14□□□□□ -0.95
NEFHP1-201ENST00000412845 M0QZ58 72 aa9.08□□□□□ -0.96
NEFHP1-201ENST00000412845 NDUFAF8A1L188 74 aa9.04□□□□□ -0.96
NEFHP1-201ENST00000412845 KIAA1109Q2LD37 5005 aa9.03□□□□□ -0.96
NEFHP1-201ENST00000412845 RYR3Q15413 4870 aa8.99□□□□□ -0.97
NEFHP1-201ENST00000412845 ABCA13Q86UQ4 5058 aa8.87□□□□□ -0.99
NEFHP1-201ENST00000412845 R4GN34 69 aa8.86□□□□□ -0.99
NEFHP1-201ENST00000412845 LORP23490 312 aaPredicted RBP8.82□□□□□ -1
NEFHP1-201ENST00000412845 MUC17Q685J3 4493 aa8.71□□□□□ -1.02
NEFHP1-201ENST00000412845 EPPK1P58107 5090 aaKnown RBP8.67□□□□□ -1.02
NEFHP1-201ENST00000412845 KRTAP4-1Q9BYQ7 146 aa8.65□□□□□ -1.02
NEFHP1-201ENST00000412845 KRTAP4-5Q9BYR2 181 aa8.63□□□□□ -1.03
NEFHP1-201ENST00000412845 PLAC4Q8WY50 150 aa8.62□□□□□ -1.03
NEFHP1-201ENST00000412845 SEC61BP60468 96 aaKnown RBP8.58□□□□□ -1.04
NEFHP1-201ENST00000412845 KRTAP19-2Q3LHN2 52 aa8.49□□□□□ -1.05
NEFHP1-201ENST00000412845 CAMK2N1Q7Z7J9 78 aa8.45□□□□□ -1.06
NEFHP1-201ENST00000412845 PP632Q6XCG6 107 aa8.36□□□□□ -1.07
NEFHP1-201ENST00000412845 MUC2Q02817 5179 aa8.34□□□□□ -1.07
NEFHP1-201ENST00000412845 FLGP20930 4061 aaPredicted RBP8.27□□□□□ -1.09
NEFHP1-201ENST00000412845 J3QL48 77 aa8.26□□□□□ -1.09
NEFHP1-201ENST00000412845 LUZP6Q538Z0 58 aa8.22□□□□□ -1.09
NEFHP1-201ENST00000412845 HERC2O95714 4834 aa8.21□□□□□ -1.09
NEFHP1-201ENST00000412845 TNP1P09430 55 aa8.14□□□□□ -1.11
NEFHP1-201ENST00000412845 PCLOQ9Y6V0 5065 aa8.11□□□□□ -1.11
NEFHP1-201ENST00000412845 HERC1Q15751 4861 aa8.07□□□□□ -1.12
NEFHP1-201ENST00000412845 BIRC6Q9NR09 4857 aa8.05□□□□□ -1.12
NEFHP1-201ENST00000412845 KRTAP23-1A1A580 65 aa8□□□□□ -1.13
NEFHP1-201ENST00000412845 SPRR5A0A1B0GTR4 108 aa7.97□□□□□ -1.13
NEFHP1-201ENST00000412845 A0A0A0MQY5 61 aa7.96□□□□□ -1.14
NEFHP1-201ENST00000412845 FAT4Q6V0I7 4981 aa7.91□□□□□ -1.14
NEFHP1-201ENST00000412845 LCE2CQ5TA81 110 aa7.86□□□□□ -1.15
NEFHP1-201ENST00000412845 KRTAP19-1Q8IUB9 90 aa7.85□□□□□ -1.15
NEFHP1-201ENST00000412845 SPRR2GQ9BYE4 73 aa7.84□□□□□ -1.15
NEFHP1-201ENST00000412845 HMCN2Q8NDA2 5059 aa7.77□□□□□ -1.17
NEFHP1-201ENST00000412845 LCE3AQ5TA76 89 aa7.76□□□□□ -1.17
NEFHP1-201ENST00000412845 M0R2T5 61 aa7.67□□□□□ -1.18
NEFHP1-201ENST00000412845 MT1FP04733 61 aa7.61□□□□□ -1.19
NEFHP1-201ENST00000412845 MT1HP80294 61 aa7.61□□□□□ -1.19
NEFHP1-201ENST00000412845 UBR4Q5T4S7 5183 aa7.58□□□□□ -1.2
NEFHP1-201ENST00000412845 RNF213Q63HN8 5207 aa7.57□□□□□ -1.2
NEFHP1-201ENST00000412845 MT2AP02795 61 aa7.57□□□□□ -1.2
NEFHP1-201ENST00000412845 KRTAP10-10P60014 251 aa7.57□□□□□ -1.2
NEFHP1-201ENST00000412845 KRTAP8-1Q8IUC2 63 aa7.49□□□□□ -1.21
NEFHP1-201ENST00000412845 KRTAP9-8Q9BYQ0 159 aa7.49□□□□□ -1.21
NEFHP1-201ENST00000412845 KRTAP19-8Q3LI54 63 aa7.44□□□□□ -1.22
NEFHP1-201ENST00000412845 KRTAP10-5P60370 271 aa7.43□□□□□ -1.22
NEFHP1-201ENST00000412845 MT1XP80297 61 aa7.42□□□□□ -1.22
NEFHP1-201ENST00000412845 MT1BP07438 61 aa7.41□□□□□ -1.22
NEFHP1-201ENST00000412845 KRTAP12-3P60328 96 aa7.33□□□□□ -1.24
NEFHP1-201ENST00000412845 KRTAP10-12P60413 245 aa7.31□□□□□ -1.24
NEFHP1-201ENST00000412845 KRTAP10-7P60409 375 aaPredicted RBP7.27□□□□□ -1.25
NEFHP1-201ENST00000412845 PRO2289Q9P1D8 64 aa7.23□□□□□ -1.25
NEFHP1-201ENST00000412845 KRTAP9-3Q9BYQ3 159 aa7.15□□□□□ -1.26
NEFHP1-201ENST00000412845 INE1O15225 51 aa7.14□□□□□ -1.27
NEFHP1-201ENST00000412845 KRTAP19-5Q3LI72 72 aa6.98□□□□□ -1.29
NEFHP1-201ENST00000412845 KMT2DO14686 5537 aa6.94□□□□□ -1.3
NEFHP1-201ENST00000412845 LCE3CQ5T5A8 94 aa6.92□□□□□ -1.3
NEFHP1-201ENST00000412845 USH2AO75445 5202 aa6.87□□□□□ -1.31
NEFHP1-201ENST00000412845 LCE2BO14633 110 aa6.87□□□□□ -1.31
NEFHP1-201ENST00000412845 KRTAP4-8A0A0G2JLE6 195 aa6.8□□□□□ -1.32
NEFHP1-201ENST00000412845 KRTAP4-8Q9BYQ9 185 aa6.8□□□□□ -1.32
NEFHP1-201ENST00000412845 KRTAP9-6A8MVA2 160 aa6.78□□□□□ -1.32
NEFHP1-201ENST00000412845 KRTAP4-7Q9BYR0 210 aa6.64□□□□□ -1.35
NEFHP1-201ENST00000412845 KRTAP19-7Q3SYF9 63 aa6.61□□□□□ -1.35
NEFHP1-201ENST00000412845 KRTAP2-3P0C7H8 128 aa6.55□□□□□ -1.36
NEFHP1-201ENST00000412845 KRTAP2-4Q9BYR9 128 aa6.55□□□□□ -1.36
NEFHP1-201ENST00000412845 KRTAP2-1Q9BYU5 128 aa6.55□□□□□ -1.36
NEFHP1-201ENST00000412845 LCE2AQ5TA79 106 aaPredicted RBP6.47□□□□□ -1.37
NEFHP1-201ENST00000412845 MT1LQ93083 61 aa6.42□□□□□ -1.38
NEFHP1-201ENST00000412845 MT1EP04732 61 aa6.37□□□□□ -1.39
NEFHP1-201ENST00000412845 KRTAP19-4Q3LI73 84 aa6.27□□□□□ -1.41
NEFHP1-201ENST00000412845 SSPOA2VEC9 5147 aa6.25□□□□□ -1.41
NEFHP1-201ENST00000412845 LOC100996750A0A140TA64 210 aa6.18□□□□□ -1.42
NEFHP1-201ENST00000412845 KRTAP4-3Q9BYR4 195 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms