RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 SPART-AS1P0CW21 52 aa1.23□□□□□ -2.21
HMGB3P2-201ENST00000411913 CCL19Q99731 98 aa1.23□□□□□ -2.21
HMGB3P2-201ENST00000411913 CSMD2Q7Z408 3487 aa1.23□□□□□ -2.21
HMGB3P2-201ENST00000411913 IGF2RP11717 2491 aa1.23□□□□□ -2.21
HMGB3P2-201ENST00000411913 CSPG4Q6UVK1 2322 aa1.22□□□□□ -2.21
HMGB3P2-201ENST00000411913 DNAH8Q96JB1 4490 aa1.22□□□□□ -2.21
HMGB3P2-201ENST00000411913 ANK2Q01484 3957 aa1.22□□□□□ -2.21
HMGB3P2-201ENST00000411913 KMT2CQ8NEZ4 4911 aaKnown RBP1.22□□□□□ -2.21
HMGB3P2-201ENST00000411913 NBEAL1Q6ZS30 2694 aa1.22□□□□□ -2.21
HMGB3P2-201ENST00000411913 A0A087WTM6 91 aa1.22□□□□□ -2.21
HMGB3P2-201ENST00000411913 H0YAA0 97 aa1.22□□□□□ -2.21
HMGB3P2-201ENST00000411913 K7ERS5 55 aa1.22□□□□□ -2.21
HMGB3P2-201ENST00000411913 LY6G6CO95867 125 aa1.22□□□□□ -2.21
HMGB3P2-201ENST00000411913 Q6ZSA8 131 aa1.22□□□□□ -2.21
HMGB3P2-201ENST00000411913 C20orf166-AS1Q96NR2 134 aa1.22□□□□□ -2.21
HMGB3P2-201ENST00000411913 USP9YO00507 2555 aaPredicted RBP1.22□□□□□ -2.21
HMGB3P2-201ENST00000411913 CENPEQ02224 2701 aa1.22□□□□□ -2.21
HMGB3P2-201ENST00000411913 DNAH6Q9C0G6 4158 aa1.22□□□□□ -2.21
HMGB3P2-201ENST00000411913 FRAS1Q86XX4 4008 aa1.21□□□□□ -2.22
HMGB3P2-201ENST00000411913 NUPR2A6NF83 97 aa1.21□□□□□ -2.22
HMGB3P2-201ENST00000411913 DEFB4AO15263 64 aa1.21□□□□□ -2.22
HMGB3P2-201ENST00000411913 KRTAP12-4P60329 112 aa1.21□□□□□ -2.22
HMGB3P2-201ENST00000411913 PRLHP81277 87 aa1.21□□□□□ -2.22
HMGB3P2-201ENST00000411913 HECTD4Q9Y4D8 3996 aa1.21□□□□□ -2.22
HMGB3P2-201ENST00000411913 TENM1Q9UKZ4 2725 aa1.21□□□□□ -2.22
HMGB3P2-201ENST00000411913 VPS13DQ5THJ4 4388 aa1.21□□□□□ -2.22
HMGB3P2-201ENST00000411913 DNAH10Q8IVF4 4471 aa1.21□□□□□ -2.22
HMGB3P2-201ENST00000411913 A0A096LNI7 61 aa1.2□□□□□ -2.22
HMGB3P2-201ENST00000411913 DEFB135Q30KP9 77 aa1.2□□□□□ -2.22
HMGB3P2-201ENST00000411913 HIVEP3Q5T1R4 2406 aa1.2□□□□□ -2.22
HMGB3P2-201ENST00000411913 DNAH7Q8WXX0 4024 aa1.2□□□□□ -2.22
HMGB3P2-201ENST00000411913 CMYA5Q8N3K9 4069 aa1.2□□□□□ -2.22
HMGB3P2-201ENST00000411913 TPRXLQ17RH7 258 aa1.19□□□□□ -2.22
HMGB3P2-201ENST00000411913 DEFB113Q30KQ7 82 aa1.19□□□□□ -2.22
HMGB3P2-201ENST00000411913 KRTAP21-3Q3LHN1 58 aa1.19□□□□□ -2.22
HMGB3P2-201ENST00000411913 R4GN34 69 aa1.19□□□□□ -2.22
HMGB3P2-201ENST00000411913 DNAH2Q9P225 4427 aa1.19□□□□□ -2.22
HMGB3P2-201ENST00000411913 PRKDCP78527 4128 aaKnown RBP1.19□□□□□ -2.22
HMGB3P2-201ENST00000411913 MEGF8Q7Z7M0 2845 aa1.18□□□□□ -2.22
HMGB3P2-201ENST00000411913 MTORP42345 2549 aa1.18□□□□□ -2.22
HMGB3P2-201ENST00000411913 RYR2Q92736 4967 aa1.18□□□□□ -2.22
HMGB3P2-201ENST00000411913 F8P00451 2351 aa1.18□□□□□ -2.22
HMGB3P2-201ENST00000411913 HTN3P15516 51 aa1.18□□□□□ -2.22
HMGB3P2-201ENST00000411913 PSORS1C2Q9UIG4 136 aa1.18□□□□□ -2.22
HMGB3P2-201ENST00000411913 CUBNO60494 3623 aa1.17□□□□□ -2.22
HMGB3P2-201ENST00000411913 A0A1B0GU33 70 aa1.17□□□□□ -2.22
HMGB3P2-201ENST00000411913 H1FX-AS1Q4G0G2 97 aa1.17□□□□□ -2.22
HMGB3P2-201ENST00000411913 HERC1Q15751 4861 aa1.17□□□□□ -2.22
HMGB3P2-201ENST00000411913 DNAH9Q9NYC9 4486 aa1.17□□□□□ -2.22
HMGB3P2-201ENST00000411913 SONP18583 2426 aaKnown RBP1.17□□□□□ -2.22
HMGB3P2-201ENST00000411913 CSMD3Q7Z407 3707 aa1.17□□□□□ -2.22
HMGB3P2-201ENST00000411913 ZNF469Q96JG9 3925 aaPredicted RBP1.17□□□□□ -2.22
HMGB3P2-201ENST00000411913 ABCA13Q86UQ4 5058 aa1.17□□□□□ -2.22
HMGB3P2-201ENST00000411913 TENM3Q9P273 2699 aa1.16□□□□□ -2.22
HMGB3P2-201ENST00000411913 COL7A1Q02388 2944 aa1.16□□□□□ -2.22
HMGB3P2-201ENST00000411913 DNAH11Q96DT5 4516 aa1.16□□□□□ -2.22
HMGB3P2-201ENST00000411913 NBDYA0A0U1RRE5 68 aa1.15□□□□□ -2.23
HMGB3P2-201ENST00000411913 COX6B2Q6YFQ2 88 aa1.15□□□□□ -2.23
HMGB3P2-201ENST00000411913 DEFB123Q8N688 67 aa1.15□□□□□ -2.23
HMGB3P2-201ENST00000411913 CRIPTQ9P021 101 aa1.15□□□□□ -2.23
HMGB3P2-201ENST00000411913 HUWE1Q7Z6Z7 4374 aaKnown RBP1.15□□□□□ -2.23
HMGB3P2-201ENST00000411913 SSBP3-AS1Q7Z2R9 100 aa1.14□□□□□ -2.23
HMGB3P2-201ENST00000411913 SPACA4Q8TDM5 124 aa1.14□□□□□ -2.23
HMGB3P2-201ENST00000411913 SACSQ9NZJ4 4579 aa1.14□□□□□ -2.23
HMGB3P2-201ENST00000411913 FLG2Q5D862 2391 aaPredicted RBP1.14□□□□□ -2.23
HMGB3P2-201ENST00000411913 TGP01266 2768 aa1.13□□□□□ -2.23
HMGB3P2-201ENST00000411913 RPL37P61927 97 aaKnown RBP1.13□□□□□ -2.23
HMGB3P2-201ENST00000411913 SYNE2Q8WXH0 6885 aaKnown RBP1.13□□□□□ -2.23
HMGB3P2-201ENST00000411913 MYCBP2O75592 4640 aa1.13□□□□□ -2.23
HMGB3P2-201ENST00000411913 NSD1Q96L73 2696 aaPredicted RBP1.12□□□□□ -2.23
HMGB3P2-201ENST00000411913 PLECQ15149 4684 aaKnown RBP1.12□□□□□ -2.23
HMGB3P2-201ENST00000411913 ITPR2Q14571 2701 aa1.12□□□□□ -2.23
HMGB3P2-201ENST00000411913 FCGBPQ9Y6R7 5405 aaPredicted RBP1.12□□□□□ -2.23
HMGB3P2-201ENST00000411913 KRTAP12-3P60328 96 aa1.12□□□□□ -2.23
HMGB3P2-201ENST00000411913 Q6ZRN7 208 aaPredicted RBP1.12□□□□□ -2.23
HMGB3P2-201ENST00000411913 HERC2O95714 4834 aa1.12□□□□□ -2.23
HMGB3P2-201ENST00000411913 SPINK1P00995 79 aa1.11□□□□□ -2.23
HMGB3P2-201ENST00000411913 KRTAP13-4Q3LI77 160 aa1.11□□□□□ -2.23
HMGB3P2-201ENST00000411913 SPINK6Q6UWN8 80 aa1.11□□□□□ -2.23
HMGB3P2-201ENST00000411913 C10orf95Q9H7T3 257 aa1.11□□□□□ -2.23
HMGB3P2-201ENST00000411913 MACF1Q9UPN3 7388 aaKnown RBP1.11□□□□□ -2.23
HMGB3P2-201ENST00000411913 FSIP2Q5CZC0 6907 aa1.11□□□□□ -2.23
HMGB3P2-201ENST00000411913 KMT2AQ03164 3969 aa1.1□□□□□ -2.23
HMGB3P2-201ENST00000411913 NEBP20929 6669 aa1.1□□□□□ -2.23
HMGB3P2-201ENST00000411913 PKHD1L1Q86WI1 4243 aa1.1□□□□□ -2.23
HMGB3P2-201ENST00000411913 LRP1BQ9NZR2 4599 aa1.1□□□□□ -2.23
HMGB3P2-201ENST00000411913 ACANP16112 2415 aa1.09□□□□□ -2.23
HMGB3P2-201ENST00000411913 DNAH5Q8TE73 4624 aa1.09□□□□□ -2.23
HMGB3P2-201ENST00000411913 APLNQ9ULZ1 77 aa1.09□□□□□ -2.23
HMGB3P2-201ENST00000411913 FAT4Q6V0I7 4981 aa1.09□□□□□ -2.24
HMGB3P2-201ENST00000411913 AHNAK2Q8IVF2 5795 aa1.08□□□□□ -2.24
HMGB3P2-201ENST00000411913 KRTAP12-1P59990 96 aa1.08□□□□□ -2.24
HMGB3P2-201ENST00000411913 S4R3F8 94 aa1.08□□□□□ -2.24
HMGB3P2-201ENST00000411913 PKHD1P08F94 4074 aa1.07□□□□□ -2.24
HMGB3P2-201ENST00000411913 PKD1P98161 4303 aa1.07□□□□□ -2.24
HMGB3P2-201ENST00000411913 APOBP04114 4563 aaKnown RBP1.07□□□□□ -2.24
HMGB3P2-201ENST00000411913 FAT2Q9NYQ8 4349 aa1.07□□□□□ -2.24
HMGB3P2-201ENST00000411913 RPS29P62273 56 aaKnown RBP1.07□□□□□ -2.24
HMGB3P2-201ENST00000411913 STAB2Q8WWQ8 2551 aa1.07□□□□□ -2.24
HMGB3P2-201ENST00000411913 TNXBP22105 4242 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms