RNA–Protein interactions for RNA: ENST00000411857.2

HNRNPA1P54-201, Transcript of heterogeneous nuclear ribonucleoprotein A1 pseudogene 54, humanhuman

BASIC

Gene HNRNPA1P54, Length 9,714 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1P54-201ENST00000411857 CMYA5Q8N3K9 4069 aa3.25□□□□□ -1.89
HNRNPA1P54-201ENST00000411857 OTOGQ6ZRI0 2925 aa3.25□□□□□ -1.89
HNRNPA1P54-201ENST00000411857 CSMD3Q7Z407 3707 aa3.24□□□□□ -1.89
HNRNPA1P54-201ENST00000411857 DNAH7Q8WXX0 4024 aa3.21□□□□□ -1.9
HNRNPA1P54-201ENST00000411857 KRTAP10-4P60372 401 aaPredicted RBP3.2□□□□□ -1.9
HNRNPA1P54-201ENST00000411857 KRTAP4-5Q9BYR2 181 aa3.18□□□□□ -1.9
HNRNPA1P54-201ENST00000411857 DNAH3Q8TD57 4116 aa3.15□□□□□ -1.9
HNRNPA1P54-201ENST00000411857 DNAH1Q9P2D7 4330 aa3.15□□□□□ -1.9
HNRNPA1P54-201ENST00000411857 FRAS1Q86XX4 4008 aa3.15□□□□□ -1.91
HNRNPA1P54-201ENST00000411857 LORP23490 312 aaPredicted RBP3.14□□□□□ -1.91
HNRNPA1P54-201ENST00000411857 ANK3Q12955 4377 aaKnown RBP3.13□□□□□ -1.91
HNRNPA1P54-201ENST00000411857 KRTAP10-7P60409 375 aaPredicted RBP3.12□□□□□ -1.91
HNRNPA1P54-201ENST00000411857 ANK2Q01484 3957 aa3.07□□□□□ -1.92
HNRNPA1P54-201ENST00000411857 LYSTQ99698 3801 aa3.06□□□□□ -1.92
HNRNPA1P54-201ENST00000411857 DNAH6Q9C0G6 4158 aa3.04□□□□□ -1.92
HNRNPA1P54-201ENST00000411857 MT1HP80294 61 aa3.03□□□□□ -1.93
HNRNPA1P54-201ENST00000411857 SPRR2FQ96RM1 72 aa3.03□□□□□ -1.93
HNRNPA1P54-201ENST00000411857 KRTAP19-4Q3LI73 84 aa3.02□□□□□ -1.93
HNRNPA1P54-201ENST00000411857 SPRR2GQ9BYE4 73 aa3.01□□□□□ -1.93
HNRNPA1P54-201ENST00000411857 LCE3CQ5T5A8 94 aa3□□□□□ -1.93
HNRNPA1P54-201ENST00000411857 DNAH2Q9P225 4427 aa2.99□□□□□ -1.93
HNRNPA1P54-201ENST00000411857 KRTAP19-5Q3LI72 72 aa2.99□□□□□ -1.93
HNRNPA1P54-201ENST00000411857 HECTD4Q9Y4D8 3996 aa2.95□□□□□ -1.94
HNRNPA1P54-201ENST00000411857 MT2AP02795 61 aa2.94□□□□□ -1.94
HNRNPA1P54-201ENST00000411857 KRTAP4-1Q9BYQ7 146 aa2.9□□□□□ -1.94
HNRNPA1P54-201ENST00000411857 SPRR2EP22531 72 aa2.89□□□□□ -1.95
HNRNPA1P54-201ENST00000411857 SPRR2BP35325 72 aa2.89□□□□□ -1.95
HNRNPA1P54-201ENST00000411857 SPRR2AP35326 72 aa2.89□□□□□ -1.95
HNRNPA1P54-201ENST00000411857 KMT2AQ03164 3969 aa2.89□□□□□ -1.95
HNRNPA1P54-201ENST00000411857 VPS13BQ7Z7G8 4022 aa2.87□□□□□ -1.95
HNRNPA1P54-201ENST00000411857 MT1FP04733 61 aa2.86□□□□□ -1.95
HNRNPA1P54-201ENST00000411857 PRKDCP78527 4128 aaKnown RBP2.85□□□□□ -1.95
HNRNPA1P54-201ENST00000411857 FAT2Q9NYQ8 4349 aa2.83□□□□□ -1.96
HNRNPA1P54-201ENST00000411857 SPRR2DP22532 72 aa2.82□□□□□ -1.96
HNRNPA1P54-201ENST00000411857 LCE3BQ5TA77 95 aa2.82□□□□□ -1.96
HNRNPA1P54-201ENST00000411857 DNAH10Q8IVF4 4471 aa2.82□□□□□ -1.96
HNRNPA1P54-201ENST00000411857 LCE2BO14633 110 aa2.8□□□□□ -1.96
HNRNPA1P54-201ENST00000411857 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
HNRNPA1P54-201ENST00000411857 DNAH9Q9NYC9 4486 aa2.78□□□□□ -1.96
HNRNPA1P54-201ENST00000411857 DNAH11Q96DT5 4516 aa2.78□□□□□ -1.96
HNRNPA1P54-201ENST00000411857 DYNC2H1Q8NCM8 4307 aaKnown RBP2.76□□□□□ -1.97
HNRNPA1P54-201ENST00000411857 VPS13DQ5THJ4 4388 aa2.76□□□□□ -1.97
HNRNPA1P54-201ENST00000411857 KRTAP19-8Q3LI54 63 aa2.71□□□□□ -1.98
HNRNPA1P54-201ENST00000411857 MT1GP13640 62 aa2.7□□□□□ -1.98
HNRNPA1P54-201ENST00000411857 FLGP20930 4061 aaPredicted RBP2.68□□□□□ -1.98
HNRNPA1P54-201ENST00000411857 PKHD1P08F94 4074 aa2.67□□□□□ -1.98
HNRNPA1P54-201ENST00000411857 MT1XP80297 61 aa2.66□□□□□ -1.98
HNRNPA1P54-201ENST00000411857 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
HNRNPA1P54-201ENST00000411857 DNAH17Q9UFH2 4485 aa2.64□□□□□ -1.99
HNRNPA1P54-201ENST00000411857 DNAH8Q96JB1 4490 aa2.64□□□□□ -1.99
HNRNPA1P54-201ENST00000411857 PKHD1L1Q86WI1 4243 aa2.63□□□□□ -1.99
HNRNPA1P54-201ENST00000411857 DYNC1H1Q14204 4646 aaKnown RBP2.62□□□□□ -1.99
HNRNPA1P54-201ENST00000411857 LCE2CQ5TA81 110 aa2.62□□□□□ -1.99
HNRNPA1P54-201ENST00000411857 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
HNRNPA1P54-201ENST00000411857 KRTAP19-1Q8IUB9 90 aa2.6□□□□□ -1.99
HNRNPA1P54-201ENST00000411857 DNAH5Q8TE73 4624 aa2.57□□□□□ -2
HNRNPA1P54-201ENST00000411857 MT3P25713 68 aa2.57□□□□□ -2
HNRNPA1P54-201ENST00000411857 STARD9Q9P2P6 4700 aa2.57□□□□□ -2
HNRNPA1P54-201ENST00000411857 LRP1Q07954 4544 aaKnown RBP2.56□□□□□ -2
HNRNPA1P54-201ENST00000411857 LCE2DQ5TA82 110 aaPredicted RBP2.55□□□□□ -2
HNRNPA1P54-201ENST00000411857 MT1BP07438 61 aa2.54□□□□□ -2
HNRNPA1P54-201ENST00000411857 KRTAP19-3Q7Z4W3 81 aa2.53□□□□□ -2
HNRNPA1P54-201ENST00000411857 SPRR5A0A1B0GTR4 108 aa2.53□□□□□ -2
HNRNPA1P54-201ENST00000411857 PLECQ15149 4684 aaKnown RBP2.52□□□□□ -2.01
HNRNPA1P54-201ENST00000411857 KRTAP9-8Q9BYQ0 159 aa2.51□□□□□ -2.01
HNRNPA1P54-201ENST00000411857 RYR1P21817 5038 aa2.51□□□□□ -2.01
HNRNPA1P54-201ENST00000411857 MT1LQ93083 61 aa2.5□□□□□ -2.01
HNRNPA1P54-201ENST00000411857 SACSQ9NZJ4 4579 aa2.49□□□□□ -2.01
HNRNPA1P54-201ENST00000411857 KRTAP9-3Q9BYQ3 159 aa2.49□□□□□ -2.01
HNRNPA1P54-201ENST00000411857 KRTAP4-8A0A0G2JLE6 195 aa2.48□□□□□ -2.01
HNRNPA1P54-201ENST00000411857 KRTAP4-8Q9BYQ9 185 aa2.48□□□□□ -2.01
HNRNPA1P54-201ENST00000411857 LRP1BQ9NZR2 4599 aa2.46□□□□□ -2.02
HNRNPA1P54-201ENST00000411857 MT4P47944 62 aa2.45□□□□□ -2.02
HNRNPA1P54-201ENST00000411857 FAT1Q14517 4588 aa2.45□□□□□ -2.02
HNRNPA1P54-201ENST00000411857 DNHD1Q96M86 4753 aa2.44□□□□□ -2.02
HNRNPA1P54-201ENST00000411857 APOBP04114 4563 aaKnown RBP2.43□□□□□ -2.02
HNRNPA1P54-201ENST00000411857 MT1EP04732 61 aa2.43□□□□□ -2.02
HNRNPA1P54-201ENST00000411857 PRM1P04553 51 aa2.42□□□□□ -2.02
HNRNPA1P54-201ENST00000411857 PKD1P98161 4303 aa2.38□□□□□ -2.03
HNRNPA1P54-201ENST00000411857 MT1MQ8N339 61 aa2.38□□□□□ -2.03
HNRNPA1P54-201ENST00000411857 HSPG2P98160 4391 aa2.38□□□□□ -2.03
HNRNPA1P54-201ENST00000411857 TNXBP22105 4242 aa2.37□□□□□ -2.03
HNRNPA1P54-201ENST00000411857 LCE1DQ5T752 114 aa2.37□□□□□ -2.03
HNRNPA1P54-201ENST00000411857 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
HNRNPA1P54-201ENST00000411857 RYR2Q92736 4967 aa2.37□□□□□ -2.03
HNRNPA1P54-201ENST00000411857 MYCBP2O75592 4640 aa2.36□□□□□ -2.03
HNRNPA1P54-201ENST00000411857 FAT3Q8TDW7 4589 aa2.34□□□□□ -2.03
HNRNPA1P54-201ENST00000411857 RYR3Q15413 4870 aa2.34□□□□□ -2.04
HNRNPA1P54-201ENST00000411857 PCLOQ9Y6V0 5065 aa2.33□□□□□ -2.04
HNRNPA1P54-201ENST00000411857 KRTAP4-7Q9BYR0 210 aa2.33□□□□□ -2.04
HNRNPA1P54-201ENST00000411857 HERC1Q15751 4861 aa2.32□□□□□ -2.04
HNRNPA1P54-201ENST00000411857 KRTAP17-1Q9BYP8 105 aa2.31□□□□□ -2.04
HNRNPA1P54-201ENST00000411857 KRTAP19-6Q3LI70 58 aa2.3□□□□□ -2.04
HNRNPA1P54-201ENST00000411857 KRTAP9-2Q9BYQ4 174 aa2.28□□□□□ -2.04
HNRNPA1P54-201ENST00000411857 BIRC6Q9NR09 4857 aa2.27□□□□□ -2.05
HNRNPA1P54-201ENST00000411857 LOC100996750A0A140TA64 210 aa2.27□□□□□ -2.05
HNRNPA1P54-201ENST00000411857 KRTAP20-1Q3LI63 56 aa2.26□□□□□ -2.05
HNRNPA1P54-201ENST00000411857 LCE5AQ5TCM9 118 aa2.25□□□□□ -2.05
HNRNPA1P54-201ENST00000411857 MT1AP04731 61 aa2.24□□□□□ -2.05
HNRNPA1P54-201ENST00000411857 MUC17Q685J3 4493 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 361.9 ms