RNA–Protein interactions for RNA: ENST00000410940.1

RNU4-78P-201, Transcript of RNA, U4 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU4-78P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-78P-201ENST00000410940 NIPBLQ6KC79 2804 aaeCLIP0.16□□□□□ -2.38
RNU4-78P-201ENST00000410940 NBASA2RRP1 2371 aa0.16□□□□□ -2.38
RNU4-78P-201ENST00000410940 MUC3AQ02505 3323 aa0.15□□□□□ -2.38
RNU4-78P-201ENST00000410940 EFCAB6Q5THR3 1501 aa0.15□□□□□ -2.39
RNU4-78P-201ENST00000410940 IGLV5-48A0A075B6I7 105 aa0.15□□□□□ -2.39
RNU4-78P-201ENST00000410940 CRYBG3Q68DQ2 2970 aa0.15□□□□□ -2.39
RNU4-78P-201ENST00000410940 FREM2Q5SZK8 3169 aa0.14□□□□□ -2.39
RNU4-78P-201ENST00000410940 SRRM2Q9UQ35 2752 aaKnown RBP0.14□□□□□ -2.39
RNU4-78P-201ENST00000410940 DCHS2Q6V1P9 2916 aa0.14□□□□□ -2.39
RNU4-78P-201ENST00000410940 LRP2P98164 4655 aa0.14□□□□□ -2.39
RNU4-78P-201ENST00000410940 NF1P21359 2839 aa0.14□□□□□ -2.39
RNU4-78P-201ENST00000410940 DMXL2Q8TDJ6 3036 aa0.13□□□□□ -2.39
RNU4-78P-201ENST00000410940 KIF21BO75037 1637 aa0.13□□□□□ -2.39
RNU4-78P-201ENST00000410940 HSPG2P98160 4391 aa0.13□□□□□ -2.39
RNU4-78P-201ENST00000410940 CENPEQ02224 2701 aa0.13□□□□□ -2.39
RNU4-78P-201ENST00000410940 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
RNU4-78P-201ENST00000410940 NBPF19A0A087WUL8 3843 aa0.12□□□□□ -2.39
RNU4-78P-201ENST00000410940 MGAQ8IWI9 3026 aa0.12□□□□□ -2.39
RNU4-78P-201ENST00000410940 RELNP78509 3460 aa0.12□□□□□ -2.39
RNU4-78P-201ENST00000410940 SMIM27A0A1W2PRY6 76 aa0.12□□□□□ -2.39
RNU4-78P-201ENST00000410940 LOC400499M0QZD8 3231 aa0.12□□□□□ -2.39
RNU4-78P-201ENST00000410940 LMO7Q8WWI1 1683 aa0.11□□□□□ -2.39
RNU4-78P-201ENST00000410940 STARD9Q9P2P6 4700 aa0.11□□□□□ -2.39
RNU4-78P-201ENST00000410940 LRP1BQ9NZR2 4599 aa0.11□□□□□ -2.39
RNU4-78P-201ENST00000410940 ASPMQ8IZT6 3477 aa0.11□□□□□ -2.39
RNU4-78P-201ENST00000410940 BRCA2P51587 3418 aa0.11□□□□□ -2.39
RNU4-78P-201ENST00000410940 CENPFP49454 3210 aa0.11□□□□□ -2.39
RNU4-78P-201ENST00000410940 CUBNO60494 3623 aa0.11□□□□□ -2.39
RNU4-78P-201ENST00000410940 TACC2O95359 2948 aa0.1□□□□□ -2.39
RNU4-78P-201ENST00000410940 MMP24-AS1A0A0U1RRL7 71 aa0.1□□□□□ -2.39
RNU4-78P-201ENST00000410940 SPRR2EP22531 72 aa0.1□□□□□ -2.39
RNU4-78P-201ENST00000410940 SVEP1Q4LDE5 3571 aa0.1□□□□□ -2.39
RNU4-78P-201ENST00000410940 CFAP54Q96N23 3096 aa0.1□□□□□ -2.39
RNU4-78P-201ENST00000410940 MYO15AQ9UKN7 3530 aa0.1□□□□□ -2.39
RNU4-78P-201ENST00000410940 DNAH7Q8WXX0 4024 aa0.1□□□□□ -2.39
RNU4-78P-201ENST00000410940 ADGRG4Q8IZF6 3080 aa0.09□□□□□ -2.39
RNU4-78P-201ENST00000410940 DYNC1H1Q14204 4646 aaKnown RBP0.09□□□□□ -2.39
RNU4-78P-201ENST00000410940 LAMA5O15230 3695 aa0.09□□□□□ -2.39
RNU4-78P-201ENST00000410940 LINC01546A6NGU7 62 aa0.09□□□□□ -2.4
RNU4-78P-201ENST00000410940 MT4P47944 62 aa0.09□□□□□ -2.4
RNU4-78P-201ENST00000410940 KRTAP6-2Q3LI66 62 aa0.09□□□□□ -2.4
RNU4-78P-201ENST00000410940 KRTAP19-6Q3LI70 58 aa0.09□□□□□ -2.4
RNU4-78P-201ENST00000410940 HECTD4Q9Y4D8 3996 aa0.08□□□□□ -2.4
RNU4-78P-201ENST00000410940 MT1AP04731 61 aa0.08□□□□□ -2.4
RNU4-78P-201ENST00000410940 FRYLO94915 3013 aa0.08□□□□□ -2.4
RNU4-78P-201ENST00000410940 WDFY3Q8IZQ1 3526 aa0.07□□□□□ -2.4
RNU4-78P-201ENST00000410940 A0A1B0GUL6 1792 aa0.06□□□□□ -2.4
RNU4-78P-201ENST00000410940 CHD7Q9P2D1 2997 aa0.06□□□□□ -2.4
RNU4-78P-201ENST00000410940 DMXL1Q9Y485 3027 aa0.06□□□□□ -2.4
RNU4-78P-201ENST00000410940 A8MTW9 85 aa0.06□□□□□ -2.4
RNU4-78P-201ENST00000410940 M0QY20 66 aa0.06□□□□□ -2.4
RNU4-78P-201ENST00000410940 CSMD2Q7Z408 3487 aa0.06□□□□□ -2.4
RNU4-78P-201ENST00000410940 VPS13CQ709C8 3753 aa0.06□□□□□ -2.4
RNU4-78P-201ENST00000410940 UTRNP46939 3433 aa0.05□□□□□ -2.4
RNU4-78P-201ENST00000410940 USP34Q70CQ2 3546 aa0.05□□□□□ -2.4
RNU4-78P-201ENST00000410940 VPS13AQ96RL7 3174 aa0.05□□□□□ -2.4
RNU4-78P-201ENST00000410940 SPTBN5Q9NRC6 3674 aaKnown RBP0.04□□□□□ -2.4
RNU4-78P-201ENST00000410940 TNP1P09430 55 aa0.04□□□□□ -2.4
RNU4-78P-201ENST00000410940 LYSTQ99698 3801 aa0.04□□□□□ -2.4
RNU4-78P-201ENST00000410940 KAAG1Q9UBP8 84 aa0.04□□□□□ -2.4
RNU4-78P-201ENST00000410940 HTTP42858 3142 aa0.04□□□□□ -2.4
RNU4-78P-201ENST00000410940 PKD1P98161 4303 aa0.04□□□□□ -2.4
RNU4-78P-201ENST00000410940 FAT1Q14517 4588 aa0.03□□□□□ -2.4
RNU4-78P-201ENST00000410940 FAM208AQ9UK61 1670 aaKnown RBP0.03□□□□□ -2.4
RNU4-78P-201ENST00000410940 DEFB131AP59861 70 aa0.03□□□□□ -2.4
RNU4-78P-201ENST00000410940 DNAH14Q0VDD8 3507 aa0.03□□□□□ -2.4
RNU4-78P-201ENST00000410940 ACACAQ13085 2346 aa0.03□□□□□ -2.41
RNU4-78P-201ENST00000410940 TRPM2O94759 1503 aa0.03□□□□□ -2.41
RNU4-78P-201ENST00000410940 FRYQ5TBA9 3013 aa0.02□□□□□ -2.41
RNU4-78P-201ENST00000410940 TRIOO75962 3097 aa0.02□□□□□ -2.41
RNU4-78P-201ENST00000410940 ATMQ13315 3056 aa0.02□□□□□ -2.41
RNU4-78P-201ENST00000410940 PRUNE2Q8WUY3 3088 aa0.02□□□□□ -2.41
RNU4-78P-201ENST00000410940 M0QZ58 72 aa0.02□□□□□ -2.41
RNU4-78P-201ENST00000410940 WFDC10BQ8IUB3 73 aa0.02□□□□□ -2.41
RNU4-78P-201ENST00000410940 PLECQ15149 4684 aaKnown RBP0.02□□□□□ -2.41
RNU4-78P-201ENST00000410940 IQGAP2Q13576 1575 aa0.02□□□□□ -2.41
RNU4-78P-201ENST00000410940 PKHD1P08F94 4074 aa0.02□□□□□ -2.41
RNU4-78P-201ENST00000410940 IQGAP1P46940 1657 aa0.02□□□□□ -2.41
RNU4-78P-201ENST00000410940 DNAH1Q9P2D7 4330 aa0.01□□□□□ -2.41
RNU4-78P-201ENST00000410940 DEFB110Q30KQ9 67 aa0.01□□□□□ -2.41
RNU4-78P-201ENST00000410940 SPRR2FQ96RM1 72 aa0.01□□□□□ -2.41
RNU4-78P-201ENST00000410940 SMIM2Q9BVW6 85 aa0.01□□□□□ -2.41
RNU4-78P-201ENST00000410940 APOBP04114 4563 aaKnown RBP0.01□□□□□ -2.41
RNU4-78P-201ENST00000410940 ZZEF1O43149 2961 aa0□□□□□ -2.41
RNU4-78P-201ENST00000410940 DNAH5Q8TE73 4624 aa0□□□□□ -2.41
RNU4-78P-201ENST00000410940 CDH23Q9H251 3354 aa0□□□□□ -2.41
RNU4-78P-201ENST00000410940 SMG1Q96Q15 3661 aaKnown RBP-0□□□□□ -2.41
RNU4-78P-201ENST00000410940 SPENQ96T58 3664 aaKnown RBP-0□□□□□ -2.41
RNU4-78P-201ENST00000410940 MUC17Q685J3 4493 aa-0.03□□□□□ -2.41
RNU4-78P-201ENST00000410940 PKHD1L1Q86WI1 4243 aa-0.03□□□□□ -2.41
RNU4-78P-201ENST00000410940 XIRP2A4UGR9 3374 aa-0.03□□□□□ -2.41
RNU4-78P-201ENST00000410940 SACSQ9NZJ4 4579 aa-0.04□□□□□ -2.42
RNU4-78P-201ENST00000410940 DNAH9Q9NYC9 4486 aa-0.04□□□□□ -2.42
RNU4-78P-201ENST00000410940 FLGP20930 4061 aaPredicted RBP-0.04□□□□□ -2.42
RNU4-78P-201ENST00000410940 DDX60Q8IY21 1712 aaKnown RBP-0.04□□□□□ -2.42
RNU4-78P-201ENST00000410940 GOLGB1Q14789 3259 aaKnown RBP-0.05□□□□□ -2.42
RNU4-78P-201ENST00000410940 VPS13BQ7Z7G8 4022 aa-0.05□□□□□ -2.42
RNU4-78P-201ENST00000410940 KRTAP6-1Q3LI64 71 aa-0.05□□□□□ -2.42
RNU4-78P-201ENST00000410940 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.05□□□□□ -2.42
RNU4-78P-201ENST00000410940 DNAH10Q8IVF4 4471 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms