RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 KRTAP12-3P60328 96 aa7.55□□□□□ -1.2
SMPD4-202ENST00000409031 DNAH9Q9NYC9 4486 aa7.53□□□□□ -1.2
SMPD4-202ENST00000409031 LCE3AQ5TA76 89 aa7.51□□□□□ -1.21
SMPD4-202ENST00000409031 ALMS1Q8TCU4 4167 aa7.5□□□□□ -1.21
SMPD4-202ENST00000409031 KRTAP4-5Q9BYR2 181 aa7.49□□□□□ -1.21
SMPD4-202ENST00000409031 DNAH11Q96DT5 4516 aa7.33□□□□□ -1.24
SMPD4-202ENST00000409031 DNAH10Q8IVF4 4471 aa7.32□□□□□ -1.24
SMPD4-202ENST00000409031 DNAH1Q9P2D7 4330 aa7.29□□□□□ -1.24
SMPD4-202ENST00000409031 PLECQ15149 4684 aaKnown RBP7.28□□□□□ -1.24
SMPD4-202ENST00000409031 DNAH5Q8TE73 4624 aa7.28□□□□□ -1.24
SMPD4-202ENST00000409031 DNAH17Q9UFH2 4485 aa7.2□□□□□ -1.26
SMPD4-202ENST00000409031 DNAH2Q9P225 4427 aa7.15□□□□□ -1.26
SMPD4-202ENST00000409031 PRKDCP78527 4128 aaKnown RBP7.14□□□□□ -1.27
SMPD4-202ENST00000409031 DNAH8Q96JB1 4490 aa7.13□□□□□ -1.27
SMPD4-202ENST00000409031 VPS13DQ5THJ4 4388 aa7.12□□□□□ -1.27
SMPD4-202ENST00000409031 STARD9Q9P2P6 4700 aa7.1□□□□□ -1.27
SMPD4-202ENST00000409031 ANK2Q01484 3957 aa7.07□□□□□ -1.28
SMPD4-202ENST00000409031 FAT1Q14517 4588 aa7.06□□□□□ -1.28
SMPD4-202ENST00000409031 DYNC1H1Q14204 4646 aaKnown RBP7.04□□□□□ -1.28
SMPD4-202ENST00000409031 KRTAP4-1Q9BYQ7 146 aa6.99□□□□□ -1.29
SMPD4-202ENST00000409031 SPRR2GQ9BYE4 73 aa6.97□□□□□ -1.29
SMPD4-202ENST00000409031 LRP1BQ9NZR2 4599 aa6.97□□□□□ -1.29
SMPD4-202ENST00000409031 KRTAP8-1Q8IUC2 63 aa6.95□□□□□ -1.3
SMPD4-202ENST00000409031 CRCT1Q9UGL9 99 aa6.95□□□□□ -1.3
SMPD4-202ENST00000409031 RYR1P21817 5038 aa6.92□□□□□ -1.3
SMPD4-202ENST00000409031 SPRR5A0A1B0GTR4 108 aa6.89□□□□□ -1.31
SMPD4-202ENST00000409031 SACSQ9NZJ4 4579 aa6.88□□□□□ -1.31
SMPD4-202ENST00000409031 DNAH3Q8TD57 4116 aa6.87□□□□□ -1.31
SMPD4-202ENST00000409031 KIAA1109Q2LD37 5005 aa6.85□□□□□ -1.31
SMPD4-202ENST00000409031 KRTAP10-5P60370 271 aa6.84□□□□□ -1.31
SMPD4-202ENST00000409031 KMT2AQ03164 3969 aa6.78□□□□□ -1.32
SMPD4-202ENST00000409031 DYNC2H1Q8NCM8 4307 aaKnown RBP6.78□□□□□ -1.32
SMPD4-202ENST00000409031 FAT2Q9NYQ8 4349 aa6.78□□□□□ -1.32
SMPD4-202ENST00000409031 RYR3Q15413 4870 aa6.76□□□□□ -1.33
SMPD4-202ENST00000409031 APOBP04114 4563 aaKnown RBP6.73□□□□□ -1.33
SMPD4-202ENST00000409031 LCE3CQ5T5A8 94 aa6.71□□□□□ -1.34
SMPD4-202ENST00000409031 MT2AP02795 61 aa6.7□□□□□ -1.34
SMPD4-202ENST00000409031 LYSTQ99698 3801 aa6.66□□□□□ -1.34
SMPD4-202ENST00000409031 VPS13BQ7Z7G8 4022 aa6.65□□□□□ -1.35
SMPD4-202ENST00000409031 CMYA5Q8N3K9 4069 aa6.65□□□□□ -1.35
SMPD4-202ENST00000409031 MT1HP80294 61 aa6.63□□□□□ -1.35
SMPD4-202ENST00000409031 KRTAP17-1Q9BYP8 105 aa6.63□□□□□ -1.35
SMPD4-202ENST00000409031 KRTAP19-5Q3LI72 72 aa6.61□□□□□ -1.35
SMPD4-202ENST00000409031 MYCBP2O75592 4640 aa6.61□□□□□ -1.35
SMPD4-202ENST00000409031 KRTAP19-4Q3LI73 84 aa6.61□□□□□ -1.35
SMPD4-202ENST00000409031 RYR2Q92736 4967 aa6.59□□□□□ -1.36
SMPD4-202ENST00000409031 MT1FP04733 61 aa6.58□□□□□ -1.36
SMPD4-202ENST00000409031 KRTAP19-1Q8IUB9 90 aa6.53□□□□□ -1.36
SMPD4-202ENST00000409031 FRAS1Q86XX4 4008 aa6.53□□□□□ -1.36
SMPD4-202ENST00000409031 HERC2O95714 4834 aa6.47□□□□□ -1.37
SMPD4-202ENST00000409031 DNAH6Q9C0G6 4158 aa6.46□□□□□ -1.37
SMPD4-202ENST00000409031 KRTAP19-8Q3LI54 63 aa6.46□□□□□ -1.38
SMPD4-202ENST00000409031 LRP1Q07954 4544 aaKnown RBP6.45□□□□□ -1.38
SMPD4-202ENST00000409031 BIRC6Q9NR09 4857 aa6.44□□□□□ -1.38
SMPD4-202ENST00000409031 DNAH7Q8WXX0 4024 aa6.41□□□□□ -1.38
SMPD4-202ENST00000409031 HYDINQ4G0P3 5121 aa6.41□□□□□ -1.38
SMPD4-202ENST00000409031 HECTD4Q9Y4D8 3996 aa6.38□□□□□ -1.39
SMPD4-202ENST00000409031 KRTAP10-7P60409 375 aaPredicted RBP6.37□□□□□ -1.39
SMPD4-202ENST00000409031 FAT3Q8TDW7 4589 aa6.36□□□□□ -1.39
SMPD4-202ENST00000409031 KMT2CQ8NEZ4 4911 aaKnown RBP6.32□□□□□ -1.4
SMPD4-202ENST00000409031 MT1XP80297 61 aa6.32□□□□□ -1.4
SMPD4-202ENST00000409031 PKHD1P08F94 4074 aa6.28□□□□□ -1.4
SMPD4-202ENST00000409031 HSPG2P98160 4391 aa6.25□□□□□ -1.41
SMPD4-202ENST00000409031 KRTAP12-4P60329 112 aa6.22□□□□□ -1.41
SMPD4-202ENST00000409031 MT1BP07438 61 aa6.19□□□□□ -1.42
SMPD4-202ENST00000409031 LRP2P98164 4655 aa6.16□□□□□ -1.42
SMPD4-202ENST00000409031 PCLOQ9Y6V0 5065 aa6.1□□□□□ -1.43
SMPD4-202ENST00000409031 PKD1P98161 4303 aa6.08□□□□□ -1.44
SMPD4-202ENST00000409031 HERC1Q15751 4861 aa6.06□□□□□ -1.44
SMPD4-202ENST00000409031 EPPK1P58107 5090 aaKnown RBP6.04□□□□□ -1.44
SMPD4-202ENST00000409031 KRTAP9-8Q9BYQ0 159 aa6.04□□□□□ -1.44
SMPD4-202ENST00000409031 LCE2CQ5TA81 110 aa5.96□□□□□ -1.45
SMPD4-202ENST00000409031 KRTAP19-2Q3LHN2 52 aa5.95□□□□□ -1.46
SMPD4-202ENST00000409031 ABCA13Q86UQ4 5058 aa5.95□□□□□ -1.46
SMPD4-202ENST00000409031 SPRR2FQ96RM1 72 aa5.93□□□□□ -1.46
SMPD4-202ENST00000409031 LCE3BQ5TA77 95 aa5.92□□□□□ -1.46
SMPD4-202ENST00000409031 KRTAP4-8A0A0G2JLE6 195 aa5.9□□□□□ -1.46
SMPD4-202ENST00000409031 KRTAP4-8Q9BYQ9 185 aa5.9□□□□□ -1.46
SMPD4-202ENST00000409031 MT1GP13640 62 aa5.89□□□□□ -1.47
SMPD4-202ENST00000409031 KRTAP9-3Q9BYQ3 159 aa5.86□□□□□ -1.47
SMPD4-202ENST00000409031 PKHD1L1Q86WI1 4243 aa5.85□□□□□ -1.47
SMPD4-202ENST00000409031 LPAP08519 4548 aa5.84□□□□□ -1.47
SMPD4-202ENST00000409031 MUC17Q685J3 4493 aa5.81□□□□□ -1.48
SMPD4-202ENST00000409031 LCE3DQ9BYE3 92 aa5.81□□□□□ -1.48
SMPD4-202ENST00000409031 LCE3EQ5T5B0 92 aa5.77□□□□□ -1.48
SMPD4-202ENST00000409031 TNXBP22105 4242 aa5.74□□□□□ -1.49
SMPD4-202ENST00000409031 MT1LQ93083 61 aa5.74□□□□□ -1.49
SMPD4-202ENST00000409031 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
SMPD4-202ENST00000409031 FLGP20930 4061 aaPredicted RBP5.66□□□□□ -1.5
SMPD4-202ENST00000409031 MT1EP04732 61 aa5.63□□□□□ -1.51
SMPD4-202ENST00000409031 KRTAP2-3P0C7H8 128 aa5.59□□□□□ -1.51
SMPD4-202ENST00000409031 KRTAP2-4Q9BYR9 128 aa5.59□□□□□ -1.51
SMPD4-202ENST00000409031 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.51
SMPD4-202ENST00000409031 UBR4Q5T4S7 5183 aa5.59□□□□□ -1.52
SMPD4-202ENST00000409031 SYNE1Q8NF91 8797 aaKnown RBP5.58□□□□□ -1.52
SMPD4-202ENST00000409031 KRTAP19-3Q7Z4W3 81 aa5.54□□□□□ -1.52
SMPD4-202ENST00000409031 RNF213Q63HN8 5207 aa5.54□□□□□ -1.52
SMPD4-202ENST00000409031 LCE2BO14633 110 aa5.52□□□□□ -1.53
SMPD4-202ENST00000409031 FAT4Q6V0I7 4981 aa5.51□□□□□ -1.53
SMPD4-202ENST00000409031 PRM1P04553 51 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms