RNA–Protein interactions for RNA: ENST00000406875.7

HIPK2-202, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIPK2, Length 15,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-202ENST00000406875 KRTAP3-1Q9BYR8 98 aa2.95□□□□□ -1.94
HIPK2-202ENST00000406875 KRTAP3-3Q9BYR6 98 aa2.94□□□□□ -1.94
HIPK2-202ENST00000406875 KRTAP3-2Q9BYR7 98 aa2.94□□□□□ -1.94
HIPK2-202ENST00000406875 CMYA5Q8N3K9 4069 aa2.91□□□□□ -1.94
HIPK2-202ENST00000406875 BSNQ9UPA5 3926 aa2.91□□□□□ -1.94
HIPK2-202ENST00000406875 DNAH6Q9C0G6 4158 aa2.91□□□□□ -1.94
HIPK2-202ENST00000406875 DNAH8Q96JB1 4490 aa2.9□□□□□ -1.94
HIPK2-202ENST00000406875 ALMS1Q8TCU4 4167 aa2.9□□□□□ -1.94
HIPK2-202ENST00000406875 CSMD2Q7Z408 3487 aa2.9□□□□□ -1.95
HIPK2-202ENST00000406875 FLGP20930 4061 aaPredicted RBP2.89□□□□□ -1.95
HIPK2-202ENST00000406875 DMDP11532 3685 aa2.89□□□□□ -1.95
HIPK2-202ENST00000406875 MT1HL1P0DM35 61 aa2.88□□□□□ -1.95
HIPK2-202ENST00000406875 KMT2AQ03164 3969 aa2.87□□□□□ -1.95
HIPK2-202ENST00000406875 DNAH5Q8TE73 4624 aa2.85□□□□□ -1.95
HIPK2-202ENST00000406875 ZNF469Q96JG9 3925 aaPredicted RBP2.85□□□□□ -1.95
HIPK2-202ENST00000406875 FAT1Q14517 4588 aa2.85□□□□□ -1.95
HIPK2-202ENST00000406875 DNAH7Q8WXX0 4024 aa2.84□□□□□ -1.95
HIPK2-202ENST00000406875 MYCBP2O75592 4640 aa2.84□□□□□ -1.95
HIPK2-202ENST00000406875 SPRR5A0A1B0GTR4 108 aa2.84□□□□□ -1.96
HIPK2-202ENST00000406875 DYNC1H1Q14204 4646 aaKnown RBP2.84□□□□□ -1.96
HIPK2-202ENST00000406875 KRTAP12-3P60328 96 aa2.84□□□□□ -1.96
HIPK2-202ENST00000406875 VPS13DQ5THJ4 4388 aa2.83□□□□□ -1.96
HIPK2-202ENST00000406875 DNAH3Q8TD57 4116 aa2.83□□□□□ -1.96
HIPK2-202ENST00000406875 KRTAP10-5P60370 271 aa2.82□□□□□ -1.96
HIPK2-202ENST00000406875 DNAH9Q9NYC9 4486 aa2.82□□□□□ -1.96
HIPK2-202ENST00000406875 SACSQ9NZJ4 4579 aa2.82□□□□□ -1.96
HIPK2-202ENST00000406875 VPS13CQ709C8 3753 aa2.81□□□□□ -1.96
HIPK2-202ENST00000406875 FAT3Q8TDW7 4589 aa2.81□□□□□ -1.96
HIPK2-202ENST00000406875 PRKDCP78527 4128 aaKnown RBP2.79□□□□□ -1.96
HIPK2-202ENST00000406875 HECTD4Q9Y4D8 3996 aa2.78□□□□□ -1.96
HIPK2-202ENST00000406875 KRTAP8-1Q8IUC2 63 aa2.77□□□□□ -1.97
HIPK2-202ENST00000406875 LORP23490 312 aaPredicted RBP2.75□□□□□ -1.97
HIPK2-202ENST00000406875 SVEP1Q4LDE5 3571 aa2.74□□□□□ -1.97
HIPK2-202ENST00000406875 DYNC2H1Q8NCM8 4307 aaKnown RBP2.74□□□□□ -1.97
HIPK2-202ENST00000406875 CSMD3Q7Z407 3707 aa2.74□□□□□ -1.97
HIPK2-202ENST00000406875 KRTAP10-4P60372 401 aaPredicted RBP2.73□□□□□ -1.97
HIPK2-202ENST00000406875 SPRR2GQ9BYE4 73 aa2.71□□□□□ -1.98
HIPK2-202ENST00000406875 DNHD1Q96M86 4753 aa2.66□□□□□ -1.98
HIPK2-202ENST00000406875 PKD1P98161 4303 aa2.66□□□□□ -1.98
HIPK2-202ENST00000406875 LRP1BQ9NZR2 4599 aa2.63□□□□□ -1.99
HIPK2-202ENST00000406875 HSPG2P98160 4391 aa2.63□□□□□ -1.99
HIPK2-202ENST00000406875 FAT2Q9NYQ8 4349 aa2.62□□□□□ -1.99
HIPK2-202ENST00000406875 LRP1Q07954 4544 aaKnown RBP2.62□□□□□ -1.99
HIPK2-202ENST00000406875 PKHD1L1Q86WI1 4243 aa2.62□□□□□ -1.99
HIPK2-202ENST00000406875 BIRC6Q9NR09 4857 aa2.61□□□□□ -1.99
HIPK2-202ENST00000406875 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
HIPK2-202ENST00000406875 LYSTQ99698 3801 aa2.59□□□□□ -2
HIPK2-202ENST00000406875 STARD9Q9P2P6 4700 aa2.59□□□□□ -2
HIPK2-202ENST00000406875 KRTAP12-4P60329 112 aa2.56□□□□□ -2
HIPK2-202ENST00000406875 MT1HP80294 61 aa2.55□□□□□ -2
HIPK2-202ENST00000406875 SPRR2FQ96RM1 72 aa2.51□□□□□ -2.01
HIPK2-202ENST00000406875 RYR1P21817 5038 aa2.5□□□□□ -2.01
HIPK2-202ENST00000406875 LCE3CQ5T5A8 94 aa2.5□□□□□ -2.01
HIPK2-202ENST00000406875 KRTAP19-8Q3LI54 63 aa2.48□□□□□ -2.01
HIPK2-202ENST00000406875 MT1GP13640 62 aa2.47□□□□□ -2.01
HIPK2-202ENST00000406875 HERC2O95714 4834 aa2.47□□□□□ -2.01
HIPK2-202ENST00000406875 PKHD1P08F94 4074 aa2.46□□□□□ -2.02
HIPK2-202ENST00000406875 KRTAP4-5Q9BYR2 181 aa2.45□□□□□ -2.02
HIPK2-202ENST00000406875 HERC1Q15751 4861 aa2.45□□□□□ -2.02
HIPK2-202ENST00000406875 TNXBP22105 4242 aa2.45□□□□□ -2.02
HIPK2-202ENST00000406875 MT1FP04733 61 aa2.43□□□□□ -2.02
HIPK2-202ENST00000406875 LRP2P98164 4655 aa2.43□□□□□ -2.02
HIPK2-202ENST00000406875 MT2AP02795 61 aa2.43□□□□□ -2.02
HIPK2-202ENST00000406875 LCE2CQ5TA81 110 aa2.43□□□□□ -2.02
HIPK2-202ENST00000406875 LCE2BO14633 110 aa2.42□□□□□ -2.02
HIPK2-202ENST00000406875 SPRR2EP22531 72 aa2.42□□□□□ -2.02
HIPK2-202ENST00000406875 SPRR2BP35325 72 aa2.42□□□□□ -2.02
HIPK2-202ENST00000406875 SPRR2AP35326 72 aa2.42□□□□□ -2.02
HIPK2-202ENST00000406875 RYR3Q15413 4870 aa2.4□□□□□ -2.03
HIPK2-202ENST00000406875 SPRR2DP22532 72 aa2.37□□□□□ -2.03
HIPK2-202ENST00000406875 KRTAP19-5Q3LI72 72 aa2.34□□□□□ -2.03
HIPK2-202ENST00000406875 LPAP08519 4548 aa2.31□□□□□ -2.04
HIPK2-202ENST00000406875 LCE2DQ5TA82 110 aaPredicted RBP2.3□□□□□ -2.04
HIPK2-202ENST00000406875 RYR2Q92736 4967 aa2.3□□□□□ -2.04
HIPK2-202ENST00000406875 MT1LQ93083 61 aa2.29□□□□□ -2.04
HIPK2-202ENST00000406875 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
HIPK2-202ENST00000406875 LCE2AQ5TA79 106 aaPredicted RBP2.27□□□□□ -2.05
HIPK2-202ENST00000406875 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
HIPK2-202ENST00000406875 PCLOQ9Y6V0 5065 aa2.25□□□□□ -2.05
HIPK2-202ENST00000406875 LCE3BQ5TA77 95 aa2.24□□□□□ -2.05
HIPK2-202ENST00000406875 MT1EP04732 61 aa2.24□□□□□ -2.05
HIPK2-202ENST00000406875 HYDINQ4G0P3 5121 aa2.24□□□□□ -2.05
HIPK2-202ENST00000406875 KRTAP4-1Q9BYQ7 146 aa2.23□□□□□ -2.05
HIPK2-202ENST00000406875 LCE1AQ5T7P2 110 aa2.21□□□□□ -2.06
HIPK2-202ENST00000406875 KRTAP9-8Q9BYQ0 159 aa2.21□□□□□ -2.06
HIPK2-202ENST00000406875 KRTAP19-1Q8IUB9 90 aa2.2□□□□□ -2.06
HIPK2-202ENST00000406875 EPPK1P58107 5090 aaKnown RBP2.2□□□□□ -2.06
HIPK2-202ENST00000406875 KRTAP2-3P0C7H8 128 aa2.2□□□□□ -2.06
HIPK2-202ENST00000406875 KRTAP2-4Q9BYR9 128 aa2.2□□□□□ -2.06
HIPK2-202ENST00000406875 KRTAP2-1Q9BYU5 128 aa2.2□□□□□ -2.06
HIPK2-202ENST00000406875 KRTAP19-3Q7Z4W3 81 aa2.2□□□□□ -2.06
HIPK2-202ENST00000406875 KRTAP19-6Q3LI70 58 aa2.2□□□□□ -2.06
HIPK2-202ENST00000406875 ABCA13Q86UQ4 5058 aa2.2□□□□□ -2.06
HIPK2-202ENST00000406875 KRTAP9-3Q9BYQ3 159 aa2.19□□□□□ -2.06
HIPK2-202ENST00000406875 RNF213Q63HN8 5207 aa2.19□□□□□ -2.06
HIPK2-202ENST00000406875 MT1XP80297 61 aa2.18□□□□□ -2.06
HIPK2-202ENST00000406875 MDN1Q9NU22 5596 aa2.17□□□□□ -2.06
HIPK2-202ENST00000406875 MT1MQ8N339 61 aa2.16□□□□□ -2.06
HIPK2-202ENST00000406875 UBR4Q5T4S7 5183 aa2.16□□□□□ -2.06
HIPK2-202ENST00000406875 MT1BP07438 61 aa2.15□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms