RNA–Protein interactions for RNA: ENST00000404049.7

KDM5C-205, Transcript of lysine demethylase 5C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM5C, Length 5,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-205ENST00000404049 KRTAP12-3P60328 96 aa6.69□□□□□ -1.34
KDM5C-205ENST00000404049 KRTAP10-4P60372 401 aaPredicted RBP6.59□□□□□ -1.35
KDM5C-205ENST00000404049 DNAH9Q9NYC9 4486 aa6.59□□□□□ -1.35
KDM5C-205ENST00000404049 LCE3AQ5TA76 89 aa6.59□□□□□ -1.35
KDM5C-205ENST00000404049 LORP23490 312 aaPredicted RBP6.49□□□□□ -1.37
KDM5C-205ENST00000404049 KRTAP10-5P60370 271 aa6.47□□□□□ -1.37
KDM5C-205ENST00000404049 DNAH5Q8TE73 4624 aa6.42□□□□□ -1.38
KDM5C-205ENST00000404049 PLECQ15149 4684 aaKnown RBP6.41□□□□□ -1.38
KDM5C-205ENST00000404049 ALMS1Q8TCU4 4167 aa6.37□□□□□ -1.39
KDM5C-205ENST00000404049 PRKDCP78527 4128 aaKnown RBP6.33□□□□□ -1.4
KDM5C-205ENST00000404049 DNAH11Q96DT5 4516 aa6.29□□□□□ -1.4
KDM5C-205ENST00000404049 DNAH1Q9P2D7 4330 aa6.28□□□□□ -1.4
KDM5C-205ENST00000404049 STARD9Q9P2P6 4700 aa6.25□□□□□ -1.41
KDM5C-205ENST00000404049 KRTAP8-1Q8IUC2 63 aa6.24□□□□□ -1.41
KDM5C-205ENST00000404049 FAT1Q14517 4588 aa6.2□□□□□ -1.42
KDM5C-205ENST00000404049 RYR1P21817 5038 aa6.19□□□□□ -1.42
KDM5C-205ENST00000404049 DYNC1H1Q14204 4646 aaKnown RBP6.18□□□□□ -1.42
KDM5C-205ENST00000404049 ANK2Q01484 3957 aa6.16□□□□□ -1.42
KDM5C-205ENST00000404049 DNAH10Q8IVF4 4471 aa6.15□□□□□ -1.42
KDM5C-205ENST00000404049 VPS13DQ5THJ4 4388 aa6.14□□□□□ -1.43
KDM5C-205ENST00000404049 LRP1BQ9NZR2 4599 aa6.13□□□□□ -1.43
KDM5C-205ENST00000404049 DNAH2Q9P225 4427 aa6.08□□□□□ -1.44
KDM5C-205ENST00000404049 KIAA1109Q2LD37 5005 aa6.07□□□□□ -1.44
KDM5C-205ENST00000404049 KMT2AQ03164 3969 aa6.05□□□□□ -1.44
KDM5C-205ENST00000404049 LYSTQ99698 3801 aa6.03□□□□□ -1.44
KDM5C-205ENST00000404049 RYR3Q15413 4870 aa6.01□□□□□ -1.45
KDM5C-205ENST00000404049 KRTAP4-1Q9BYQ7 146 aa5.99□□□□□ -1.45
KDM5C-205ENST00000404049 DNAH17Q9UFH2 4485 aa5.99□□□□□ -1.45
KDM5C-205ENST00000404049 MT1HP80294 61 aa5.98□□□□□ -1.45
KDM5C-205ENST00000404049 SACSQ9NZJ4 4579 aa5.95□□□□□ -1.46
KDM5C-205ENST00000404049 FAT2Q9NYQ8 4349 aa5.93□□□□□ -1.46
KDM5C-205ENST00000404049 KRTAP17-1Q9BYP8 105 aa5.91□□□□□ -1.46
KDM5C-205ENST00000404049 SPRR2GQ9BYE4 73 aa5.91□□□□□ -1.46
KDM5C-205ENST00000404049 MT2AP02795 61 aa5.9□□□□□ -1.47
KDM5C-205ENST00000404049 VPS13BQ7Z7G8 4022 aa5.9□□□□□ -1.47
KDM5C-205ENST00000404049 DNAH8Q96JB1 4490 aa5.89□□□□□ -1.47
KDM5C-205ENST00000404049 CMYA5Q8N3K9 4069 aa5.86□□□□□ -1.47
KDM5C-205ENST00000404049 DYNC2H1Q8NCM8 4307 aaKnown RBP5.85□□□□□ -1.47
KDM5C-205ENST00000404049 DNAH3Q8TD57 4116 aa5.83□□□□□ -1.48
KDM5C-205ENST00000404049 KRTAP19-5Q3LI72 72 aa5.83□□□□□ -1.48
KDM5C-205ENST00000404049 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
KDM5C-205ENST00000404049 KRTAP10-7P60409 375 aaPredicted RBP5.8□□□□□ -1.48
KDM5C-205ENST00000404049 MYCBP2O75592 4640 aa5.8□□□□□ -1.48
KDM5C-205ENST00000404049 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
KDM5C-205ENST00000404049 APOBP04114 4563 aaKnown RBP5.78□□□□□ -1.48
KDM5C-205ENST00000404049 RYR2Q92736 4967 aa5.77□□□□□ -1.49
KDM5C-205ENST00000404049 SPRR2FQ96RM1 72 aa5.76□□□□□ -1.49
KDM5C-205ENST00000404049 MT1FP04733 61 aa5.75□□□□□ -1.49
KDM5C-205ENST00000404049 FAT3Q8TDW7 4589 aa5.74□□□□□ -1.49
KDM5C-205ENST00000404049 HERC2O95714 4834 aa5.74□□□□□ -1.49
KDM5C-205ENST00000404049 LRP1Q07954 4544 aaKnown RBP5.74□□□□□ -1.49
KDM5C-205ENST00000404049 HYDINQ4G0P3 5121 aa5.72□□□□□ -1.49
KDM5C-205ENST00000404049 BIRC6Q9NR09 4857 aa5.68□□□□□ -1.5
KDM5C-205ENST00000404049 DNAH6Q9C0G6 4158 aa5.68□□□□□ -1.5
KDM5C-205ENST00000404049 DNAH7Q8WXX0 4024 aa5.65□□□□□ -1.5
KDM5C-205ENST00000404049 KMT2CQ8NEZ4 4911 aaKnown RBP5.64□□□□□ -1.51
KDM5C-205ENST00000404049 PKHD1P08F94 4074 aa5.58□□□□□ -1.52
KDM5C-205ENST00000404049 FRAS1Q86XX4 4008 aa5.54□□□□□ -1.52
KDM5C-205ENST00000404049 HSPG2P98160 4391 aa5.52□□□□□ -1.53
KDM5C-205ENST00000404049 HECTD4Q9Y4D8 3996 aa5.5□□□□□ -1.53
KDM5C-205ENST00000404049 KRTAP12-4P60329 112 aa5.49□□□□□ -1.53
KDM5C-205ENST00000404049 LRP2P98164 4655 aa5.47□□□□□ -1.53
KDM5C-205ENST00000404049 SPRR2EP22531 72 aa5.47□□□□□ -1.53
KDM5C-205ENST00000404049 SPRR2BP35325 72 aa5.47□□□□□ -1.53
KDM5C-205ENST00000404049 SPRR2AP35326 72 aa5.47□□□□□ -1.53
KDM5C-205ENST00000404049 PCLOQ9Y6V0 5065 aa5.47□□□□□ -1.53
KDM5C-205ENST00000404049 KRTAP19-8Q3LI54 63 aa5.46□□□□□ -1.54
KDM5C-205ENST00000404049 EPPK1P58107 5090 aaKnown RBP5.44□□□□□ -1.54
KDM5C-205ENST00000404049 LCE3BQ5TA77 95 aa5.4□□□□□ -1.55
KDM5C-205ENST00000404049 KRTAP19-1Q8IUB9 90 aa5.39□□□□□ -1.55
KDM5C-205ENST00000404049 SPRR5A0A1B0GTR4 108 aa5.36□□□□□ -1.55
KDM5C-205ENST00000404049 MT1XP80297 61 aa5.35□□□□□ -1.55
KDM5C-205ENST00000404049 HERC1Q15751 4861 aa5.32□□□□□ -1.56
KDM5C-205ENST00000404049 LPAP08519 4548 aa5.31□□□□□ -1.56
KDM5C-205ENST00000404049 SPRR2DP22532 72 aa5.31□□□□□ -1.56
KDM5C-205ENST00000404049 MT1GP13640 62 aa5.3□□□□□ -1.56
KDM5C-205ENST00000404049 ABCA13Q86UQ4 5058 aa5.29□□□□□ -1.56
KDM5C-205ENST00000404049 PKD1P98161 4303 aa5.29□□□□□ -1.56
KDM5C-205ENST00000404049 LCE3DQ9BYE3 92 aa5.25□□□□□ -1.57
KDM5C-205ENST00000404049 LCE2BO14633 110 aa5.23□□□□□ -1.57
KDM5C-205ENST00000404049 MT1BP07438 61 aa5.23□□□□□ -1.57
KDM5C-205ENST00000404049 LCE3EQ5T5B0 92 aa5.2□□□□□ -1.58
KDM5C-205ENST00000404049 KRTAP9-8Q9BYQ0 159 aa5.16□□□□□ -1.58
KDM5C-205ENST00000404049 LCE2CQ5TA81 110 aa5.16□□□□□ -1.58
KDM5C-205ENST00000404049 KRTAP4-8A0A0G2JLE6 195 aa5.14□□□□□ -1.59
KDM5C-205ENST00000404049 KRTAP4-8Q9BYQ9 185 aa5.14□□□□□ -1.59
KDM5C-205ENST00000404049 FSIP2Q5CZC0 6907 aa5.14□□□□□ -1.59
KDM5C-205ENST00000404049 PKHD1L1Q86WI1 4243 aa5.11□□□□□ -1.59
KDM5C-205ENST00000404049 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
KDM5C-205ENST00000404049 UBR4Q5T4S7 5183 aa5.06□□□□□ -1.6
KDM5C-205ENST00000404049 TNXBP22105 4242 aa5□□□□□ -1.61
KDM5C-205ENST00000404049 KRTAP4-7Q9BYR0 210 aa4.95□□□□□ -1.62
KDM5C-205ENST00000404049 KRTAP19-2Q3LHN2 52 aa4.94□□□□□ -1.62
KDM5C-205ENST00000404049 RNF213Q63HN8 5207 aa4.92□□□□□ -1.62
KDM5C-205ENST00000404049 KRTAP19-3Q7Z4W3 81 aa4.92□□□□□ -1.62
KDM5C-205ENST00000404049 FAT4Q6V0I7 4981 aa4.89□□□□□ -1.63
KDM5C-205ENST00000404049 MT1LQ93083 61 aa4.88□□□□□ -1.63
KDM5C-205ENST00000404049 KRTAP9-2Q9BYQ4 174 aa4.87□□□□□ -1.63
KDM5C-205ENST00000404049 PRM1P04553 51 aa4.86□□□□□ -1.63
KDM5C-205ENST00000404049 LCE2DQ5TA82 110 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms