RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 VPS13DQ5THJ4 4388 aa8.28□□□□□ -1.08
SNED1-204ENST00000401884 STARD9Q9P2P6 4700 aa8.21□□□□□ -1.09
SNED1-204ENST00000401884 DNAH17Q9UFH2 4485 aa8.21□□□□□ -1.1
SNED1-204ENST00000401884 KRTAP4-5Q9BYR2 181 aa8.19□□□□□ -1.1
SNED1-204ENST00000401884 FAT1Q14517 4588 aa8.18□□□□□ -1.1
SNED1-204ENST00000401884 LRP1BQ9NZR2 4599 aa8.13□□□□□ -1.11
SNED1-204ENST00000401884 PRO2289Q9P1D8 64 aa8.1□□□□□ -1.11
SNED1-204ENST00000401884 PRKDCP78527 4128 aaKnown RBP8.1□□□□□ -1.11
SNED1-204ENST00000401884 DNAH2Q9P225 4427 aa8.07□□□□□ -1.12
SNED1-204ENST00000401884 DNAH8Q96JB1 4490 aa8.06□□□□□ -1.12
SNED1-204ENST00000401884 DYNC1H1Q14204 4646 aaKnown RBP8.06□□□□□ -1.12
SNED1-204ENST00000401884 ALMS1Q8TCU4 4167 aa8.05□□□□□ -1.12
SNED1-204ENST00000401884 ANK2Q01484 3957 aa7.98□□□□□ -1.13
SNED1-204ENST00000401884 KMT2AQ03164 3969 aa7.97□□□□□ -1.13
SNED1-204ENST00000401884 KRTAP15-1Q3LI76 137 aa7.9□□□□□ -1.14
SNED1-204ENST00000401884 DNAH3Q8TD57 4116 aa7.88□□□□□ -1.15
SNED1-204ENST00000401884 LORP23490 312 aaPredicted RBP7.88□□□□□ -1.15
SNED1-204ENST00000401884 LYSTQ99698 3801 aa7.87□□□□□ -1.15
SNED1-204ENST00000401884 MYCBP2O75592 4640 aa7.83□□□□□ -1.16
SNED1-204ENST00000401884 RYR1P21817 5038 aa7.83□□□□□ -1.16
SNED1-204ENST00000401884 DYNC2H1Q8NCM8 4307 aaKnown RBP7.83□□□□□ -1.16
SNED1-204ENST00000401884 SACSQ9NZJ4 4579 aa7.79□□□□□ -1.16
SNED1-204ENST00000401884 VPS13BQ7Z7G8 4022 aa7.78□□□□□ -1.16
SNED1-204ENST00000401884 KIAA1109Q2LD37 5005 aa7.73□□□□□ -1.17
SNED1-204ENST00000401884 FAT2Q9NYQ8 4349 aa7.72□□□□□ -1.17
SNED1-204ENST00000401884 KRTAP4-1Q9BYQ7 146 aa7.68□□□□□ -1.18
SNED1-204ENST00000401884 FRAS1Q86XX4 4008 aa7.66□□□□□ -1.18
SNED1-204ENST00000401884 APOBP04114 4563 aaKnown RBP7.65□□□□□ -1.18
SNED1-204ENST00000401884 CMYA5Q8N3K9 4069 aa7.64□□□□□ -1.19
SNED1-204ENST00000401884 DNAH6Q9C0G6 4158 aa7.63□□□□□ -1.19
SNED1-204ENST00000401884 LRP1Q07954 4544 aaKnown RBP7.59□□□□□ -1.19
SNED1-204ENST00000401884 DNAH7Q8WXX0 4024 aa7.58□□□□□ -1.2
SNED1-204ENST00000401884 HECTD4Q9Y4D8 3996 aa7.56□□□□□ -1.2
SNED1-204ENST00000401884 RYR3Q15413 4870 aa7.54□□□□□ -1.2
SNED1-204ENST00000401884 FAT3Q8TDW7 4589 aa7.53□□□□□ -1.2
SNED1-204ENST00000401884 KRTAP10-12P60413 245 aa7.51□□□□□ -1.21
SNED1-204ENST00000401884 KRTAP23-1A1A580 65 aa7.49□□□□□ -1.21
SNED1-204ENST00000401884 KRTAP17-1Q9BYP8 105 aa7.45□□□□□ -1.22
SNED1-204ENST00000401884 LCE3AQ5TA76 89 aa7.43□□□□□ -1.22
SNED1-204ENST00000401884 KRTAP12-3P60328 96 aa7.39□□□□□ -1.23
SNED1-204ENST00000401884 HYDINQ4G0P3 5121 aa7.38□□□□□ -1.23
SNED1-204ENST00000401884 PKHD1P08F94 4074 aa7.34□□□□□ -1.23
SNED1-204ENST00000401884 LRP2P98164 4655 aa7.28□□□□□ -1.24
SNED1-204ENST00000401884 RYR2Q92736 4967 aa7.24□□□□□ -1.25
SNED1-204ENST00000401884 MT1HP80294 61 aa7.23□□□□□ -1.25
SNED1-204ENST00000401884 SPRR2GQ9BYE4 73 aa7.22□□□□□ -1.25
SNED1-204ENST00000401884 MT2AP02795 61 aa7.19□□□□□ -1.26
SNED1-204ENST00000401884 INE1O15225 51 aa7.13□□□□□ -1.27
SNED1-204ENST00000401884 HERC2O95714 4834 aa7.12□□□□□ -1.27
SNED1-204ENST00000401884 MT1FP04733 61 aa7.1□□□□□ -1.27
SNED1-204ENST00000401884 PKD1P98161 4303 aa7.05□□□□□ -1.28
SNED1-204ENST00000401884 HSPG2P98160 4391 aa7.05□□□□□ -1.28
SNED1-204ENST00000401884 KMT2CQ8NEZ4 4911 aaKnown RBP7.03□□□□□ -1.28
SNED1-204ENST00000401884 KRTAP19-1Q8IUB9 90 aa6.96□□□□□ -1.3
SNED1-204ENST00000401884 CRCT1Q9UGL9 99 aa6.94□□□□□ -1.3
SNED1-204ENST00000401884 KRTAP8-1Q8IUC2 63 aa6.88□□□□□ -1.31
SNED1-204ENST00000401884 LPAP08519 4548 aa6.85□□□□□ -1.31
SNED1-204ENST00000401884 KRTAP19-8Q3LI54 63 aa6.77□□□□□ -1.33
SNED1-204ENST00000401884 LCE2CQ5TA81 110 aa6.73□□□□□ -1.33
SNED1-204ENST00000401884 KRTAP19-5Q3LI72 72 aa6.71□□□□□ -1.34
SNED1-204ENST00000401884 TNXBP22105 4242 aa6.7□□□□□ -1.34
SNED1-204ENST00000401884 PKHD1L1Q86WI1 4243 aa6.69□□□□□ -1.34
SNED1-204ENST00000401884 BIRC6Q9NR09 4857 aa6.68□□□□□ -1.34
SNED1-204ENST00000401884 KRTAP9-8Q9BYQ0 159 aa6.67□□□□□ -1.34
SNED1-204ENST00000401884 KRTAP19-2Q3LHN2 52 aa6.66□□□□□ -1.34
SNED1-204ENST00000401884 PCLOQ9Y6V0 5065 aa6.66□□□□□ -1.34
SNED1-204ENST00000401884 KRTAP10-7P60409 375 aaPredicted RBP6.65□□□□□ -1.34
SNED1-204ENST00000401884 HERC1Q15751 4861 aa6.65□□□□□ -1.34
SNED1-204ENST00000401884 MT1XP80297 61 aa6.63□□□□□ -1.35
SNED1-204ENST00000401884 MT1BP07438 61 aa6.63□□□□□ -1.35
SNED1-204ENST00000401884 EPPK1P58107 5090 aaKnown RBP6.61□□□□□ -1.35
SNED1-204ENST00000401884 MUC17Q685J3 4493 aa6.6□□□□□ -1.35
SNED1-204ENST00000401884 KRTAP10-5P60370 271 aa6.58□□□□□ -1.36
SNED1-204ENST00000401884 LCE3CQ5T5A8 94 aa6.58□□□□□ -1.36
SNED1-204ENST00000401884 ABCA13Q86UQ4 5058 aa6.56□□□□□ -1.36
SNED1-204ENST00000401884 SPRR5A0A1B0GTR4 108 aa6.49□□□□□ -1.37
SNED1-204ENST00000401884 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
SNED1-204ENST00000401884 FLGP20930 4061 aaPredicted RBP6.45□□□□□ -1.38
SNED1-204ENST00000401884 KRTAP4-8A0A0G2JLE6 195 aa6.34□□□□□ -1.39
SNED1-204ENST00000401884 KRTAP4-8Q9BYQ9 185 aa6.34□□□□□ -1.39
SNED1-204ENST00000401884 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
SNED1-204ENST00000401884 SPRR2FQ96RM1 72 aa6.3□□□□□ -1.4
SNED1-204ENST00000401884 UBR4Q5T4S7 5183 aa6.28□□□□□ -1.4
SNED1-204ENST00000401884 MUC2Q02817 5179 aa6.24□□□□□ -1.41
SNED1-204ENST00000401884 FAT4Q6V0I7 4981 aa6.2□□□□□ -1.42
SNED1-204ENST00000401884 LCE2BO14633 110 aa6.19□□□□□ -1.42
SNED1-204ENST00000401884 RNF213Q63HN8 5207 aa6.16□□□□□ -1.42
SNED1-204ENST00000401884 HMCN2Q8NDA2 5059 aa6.16□□□□□ -1.42
SNED1-204ENST00000401884 FSIP2Q5CZC0 6907 aa6.05□□□□□ -1.44
SNED1-204ENST00000401884 MT1GP13640 62 aa6.01□□□□□ -1.45
SNED1-204ENST00000401884 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
SNED1-204ENST00000401884 SYNE1Q8NF91 8797 aaKnown RBP6□□□□□ -1.45
SNED1-204ENST00000401884 MT1LQ93083 61 aa5.92□□□□□ -1.46
SNED1-204ENST00000401884 MT1EP04732 61 aa5.88□□□□□ -1.47
SNED1-204ENST00000401884 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
SNED1-204ENST00000401884 KRTAP12-4P60329 112 aa5.86□□□□□ -1.47
SNED1-204ENST00000401884 KRTAP19-3Q7Z4W3 81 aa5.8□□□□□ -1.48
SNED1-204ENST00000401884 LCE2AQ5TA79 106 aaPredicted RBP5.79□□□□□ -1.48
SNED1-204ENST00000401884 SPRR2EP22531 72 aa5.75□□□□□ -1.49
SNED1-204ENST00000401884 SPRR2BP35325 72 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms