RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 ANK3Q12955 4377 aaKnown RBP5.67□□□□□ -1.5
LDLRAD4-203ENST00000399848 KRTAP10-5P60370 271 aa5.62□□□□□ -1.51
LDLRAD4-203ENST00000399848 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
LDLRAD4-203ENST00000399848 KRTAP4-5Q9BYR2 181 aa5.58□□□□□ -1.52
LDLRAD4-203ENST00000399848 KRTAP10-4P60372 401 aaPredicted RBP5.55□□□□□ -1.52
LDLRAD4-203ENST00000399848 HUWE1Q7Z6Z7 4374 aaKnown RBP5.55□□□□□ -1.52
LDLRAD4-203ENST00000399848 DNAH1Q9P2D7 4330 aa5.55□□□□□ -1.52
LDLRAD4-203ENST00000399848 ZNF469Q96JG9 3925 aaPredicted RBP5.52□□□□□ -1.53
LDLRAD4-203ENST00000399848 SPRR2FQ96RM1 72 aa5.47□□□□□ -1.53
LDLRAD4-203ENST00000399848 DNAH2Q9P225 4427 aa5.41□□□□□ -1.54
LDLRAD4-203ENST00000399848 LYSTQ99698 3801 aa5.37□□□□□ -1.55
LDLRAD4-203ENST00000399848 DNAH7Q8WXX0 4024 aa5.35□□□□□ -1.55
LDLRAD4-203ENST00000399848 DNAH3Q8TD57 4116 aa5.33□□□□□ -1.56
LDLRAD4-203ENST00000399848 SPRR2EP22531 72 aa5.32□□□□□ -1.56
LDLRAD4-203ENST00000399848 SPRR2BP35325 72 aa5.32□□□□□ -1.56
LDLRAD4-203ENST00000399848 SPRR2AP35326 72 aa5.32□□□□□ -1.56
LDLRAD4-203ENST00000399848 VPS13BQ7Z7G8 4022 aa5.24□□□□□ -1.57
LDLRAD4-203ENST00000399848 CMYA5Q8N3K9 4069 aa5.22□□□□□ -1.57
LDLRAD4-203ENST00000399848 SPRR2GQ9BYE4 73 aa5.22□□□□□ -1.57
LDLRAD4-203ENST00000399848 ANK2Q01484 3957 aa5.21□□□□□ -1.58
LDLRAD4-203ENST00000399848 SPRR2DP22532 72 aa5.2□□□□□ -1.58
LDLRAD4-203ENST00000399848 MT1HP80294 61 aa5.18□□□□□ -1.58
LDLRAD4-203ENST00000399848 KMT2AQ03164 3969 aa5.17□□□□□ -1.58
LDLRAD4-203ENST00000399848 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
LDLRAD4-203ENST00000399848 KRTAP12-4P60329 112 aa5.15□□□□□ -1.59
LDLRAD4-203ENST00000399848 LCE3CQ5T5A8 94 aa5.15□□□□□ -1.59
LDLRAD4-203ENST00000399848 FRAS1Q86XX4 4008 aa5.14□□□□□ -1.59
LDLRAD4-203ENST00000399848 HECTD4Q9Y4D8 3996 aa5.13□□□□□ -1.59
LDLRAD4-203ENST00000399848 LCE2BO14633 110 aa5.12□□□□□ -1.59
LDLRAD4-203ENST00000399848 KRTAP19-5Q3LI72 72 aa5.1□□□□□ -1.59
LDLRAD4-203ENST00000399848 DNAH9Q9NYC9 4486 aa5.07□□□□□ -1.6
LDLRAD4-203ENST00000399848 MT2AP02795 61 aa5.06□□□□□ -1.6
LDLRAD4-203ENST00000399848 DNAH6Q9C0G6 4158 aa5.06□□□□□ -1.6
LDLRAD4-203ENST00000399848 KRTAP4-1Q9BYQ7 146 aa5.04□□□□□ -1.6
LDLRAD4-203ENST00000399848 FAT2Q9NYQ8 4349 aa4.98□□□□□ -1.61
LDLRAD4-203ENST00000399848 DNAH10Q8IVF4 4471 aa4.97□□□□□ -1.61
LDLRAD4-203ENST00000399848 MT3P25713 68 aa4.94□□□□□ -1.62
LDLRAD4-203ENST00000399848 MT1FP04733 61 aa4.92□□□□□ -1.62
LDLRAD4-203ENST00000399848 DNAH8Q96JB1 4490 aa4.9□□□□□ -1.62
LDLRAD4-203ENST00000399848 LCE2CQ5TA81 110 aa4.89□□□□□ -1.63
LDLRAD4-203ENST00000399848 DYNC2H1Q8NCM8 4307 aaKnown RBP4.88□□□□□ -1.63
LDLRAD4-203ENST00000399848 DNAH11Q96DT5 4516 aa4.87□□□□□ -1.63
LDLRAD4-203ENST00000399848 DNAH17Q9UFH2 4485 aa4.86□□□□□ -1.63
LDLRAD4-203ENST00000399848 DNAH5Q8TE73 4624 aa4.86□□□□□ -1.63
LDLRAD4-203ENST00000399848 PRKDCP78527 4128 aaKnown RBP4.86□□□□□ -1.63
LDLRAD4-203ENST00000399848 VPS13DQ5THJ4 4388 aa4.8□□□□□ -1.64
LDLRAD4-203ENST00000399848 LCE3BQ5TA77 95 aa4.8□□□□□ -1.64
LDLRAD4-203ENST00000399848 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
LDLRAD4-203ENST00000399848 PLECQ15149 4684 aaKnown RBP4.77□□□□□ -1.65
LDLRAD4-203ENST00000399848 LCE2DQ5TA82 110 aaPredicted RBP4.77□□□□□ -1.65
LDLRAD4-203ENST00000399848 STARD9Q9P2P6 4700 aa4.73□□□□□ -1.65
LDLRAD4-203ENST00000399848 KRTAP19-8Q3LI54 63 aa4.71□□□□□ -1.66
LDLRAD4-203ENST00000399848 FLGP20930 4061 aaPredicted RBP4.69□□□□□ -1.66
LDLRAD4-203ENST00000399848 PKHD1L1Q86WI1 4243 aa4.65□□□□□ -1.67
LDLRAD4-203ENST00000399848 KRTAP9-2Q9BYQ4 174 aa4.64□□□□□ -1.67
LDLRAD4-203ENST00000399848 LRP1BQ9NZR2 4599 aa4.63□□□□□ -1.67
LDLRAD4-203ENST00000399848 KRTAP19-1Q8IUB9 90 aa4.63□□□□□ -1.67
LDLRAD4-203ENST00000399848 KRTAP9-6A0A140TA67 174 aa4.62□□□□□ -1.67
LDLRAD4-203ENST00000399848 MT1GP13640 62 aa4.62□□□□□ -1.67
LDLRAD4-203ENST00000399848 FAT1Q14517 4588 aa4.61□□□□□ -1.67
LDLRAD4-203ENST00000399848 MT1XP80297 61 aa4.61□□□□□ -1.67
LDLRAD4-203ENST00000399848 LCE3DQ9BYE3 92 aa4.59□□□□□ -1.68
LDLRAD4-203ENST00000399848 KRTAP20-1Q3LI63 56 aa4.57□□□□□ -1.68
LDLRAD4-203ENST00000399848 PKHD1P08F94 4074 aa4.57□□□□□ -1.68
LDLRAD4-203ENST00000399848 LRP1Q07954 4544 aaKnown RBP4.56□□□□□ -1.68
LDLRAD4-203ENST00000399848 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
LDLRAD4-203ENST00000399848 MT4P47944 62 aa4.5□□□□□ -1.69
LDLRAD4-203ENST00000399848 SACSQ9NZJ4 4579 aa4.48□□□□□ -1.69
LDLRAD4-203ENST00000399848 APOBP04114 4563 aaKnown RBP4.48□□□□□ -1.69
LDLRAD4-203ENST00000399848 KRTAP17-1Q9BYP8 105 aa4.47□□□□□ -1.69
LDLRAD4-203ENST00000399848 DYNC1H1Q14204 4646 aaKnown RBP4.44□□□□□ -1.7
LDLRAD4-203ENST00000399848 MT1BP07438 61 aa4.42□□□□□ -1.7
LDLRAD4-203ENST00000399848 KRTAP9-8Q9BYQ0 159 aa4.39□□□□□ -1.71
LDLRAD4-203ENST00000399848 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
LDLRAD4-203ENST00000399848 KRTAP4-8Q9BYQ9 185 aa4.36□□□□□ -1.71
LDLRAD4-203ENST00000399848 MT1LQ93083 61 aa4.34□□□□□ -1.71
LDLRAD4-203ENST00000399848 MYCBP2O75592 4640 aa4.33□□□□□ -1.72
LDLRAD4-203ENST00000399848 KRTAP19-3Q7Z4W3 81 aa4.33□□□□□ -1.72
LDLRAD4-203ENST00000399848 KRTAP9-7A8MTY7 169 aa4.32□□□□□ -1.72
LDLRAD4-203ENST00000399848 PKD1P98161 4303 aa4.31□□□□□ -1.72
LDLRAD4-203ENST00000399848 FAT3Q8TDW7 4589 aa4.29□□□□□ -1.72
LDLRAD4-203ENST00000399848 KRTAP9-3Q9BYQ3 159 aa4.29□□□□□ -1.72
LDLRAD4-203ENST00000399848 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
LDLRAD4-203ENST00000399848 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
LDLRAD4-203ENST00000399848 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
LDLRAD4-203ENST00000399848 MT1EP04732 61 aa4.19□□□□□ -1.74
LDLRAD4-203ENST00000399848 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
LDLRAD4-203ENST00000399848 PRM1P04553 51 aa4.17□□□□□ -1.74
LDLRAD4-203ENST00000399848 KRTAP19-6Q3LI70 58 aa4.17□□□□□ -1.74
LDLRAD4-203ENST00000399848 TNXBP22105 4242 aa4.16□□□□□ -1.74
LDLRAD4-203ENST00000399848 RYR1P21817 5038 aa4.16□□□□□ -1.74
LDLRAD4-203ENST00000399848 DNHD1Q96M86 4753 aa4.14□□□□□ -1.75
LDLRAD4-203ENST00000399848 HSPG2P98160 4391 aa4.14□□□□□ -1.75
LDLRAD4-203ENST00000399848 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
LDLRAD4-203ENST00000399848 LCE5AQ5TCM9 118 aa4.1□□□□□ -1.75
LDLRAD4-203ENST00000399848 MT1MQ8N339 61 aa4.07□□□□□ -1.76
LDLRAD4-203ENST00000399848 KRTAP6-3Q3LI67 103 aa4.02□□□□□ -1.77
LDLRAD4-203ENST00000399848 RYR3Q15413 4870 aa4.01□□□□□ -1.77
LDLRAD4-203ENST00000399848 LCE4AQ5TA78 99 aa4□□□□□ -1.77
LDLRAD4-203ENST00000399848 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms