RNA–Protein interactions for RNA: ENST00000398671.2

RC3H2-204, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 5

Gene RC3H2, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-204ENST00000398671 PLAC8Q9NZF1 115 aa1.44□□□□□ -2.18
RC3H2-204ENST00000398671 APLNQ9ULZ1 77 aa1.44□□□□□ -2.18
RC3H2-204ENST00000398671 ZANQ9Y493 2812 aa1.44□□□□□ -2.18
RC3H2-204ENST00000398671 ASH1LQ9NR48 2969 aaKnown RBP1.44□□□□□ -2.18
RC3H2-204ENST00000398671 SMG1Q96Q15 3661 aaKnown RBP1.43□□□□□ -2.18
RC3H2-204ENST00000398671 SPINK1P00995 79 aa1.43□□□□□ -2.18
RC3H2-204ENST00000398671 SPATA8Q6RVD6 105 aa1.43□□□□□ -2.18
RC3H2-204ENST00000398671 CELSR1Q9NYQ6 3014 aa1.43□□□□□ -2.18
RC3H2-204ENST00000398671 KMT2BQ9UMN6 2715 aaPredicted RBP1.43□□□□□ -2.18
RC3H2-204ENST00000398671 NF1P21359 2839 aa1.43□□□□□ -2.18
RC3H2-204ENST00000398671 CELSR2Q9HCU4 2923 aa1.43□□□□□ -2.18
RC3H2-204ENST00000398671 ITPR2Q14571 2701 aa1.42□□□□□ -2.18
RC3H2-204ENST00000398671 RPS29P62273 56 aaKnown RBP1.41□□□□□ -2.18
RC3H2-204ENST00000398671 CRYBG3Q68DQ2 2970 aa1.41□□□□□ -2.18
RC3H2-204ENST00000398671 RELNP78509 3460 aa1.41□□□□□ -2.18
RC3H2-204ENST00000398671 SPENQ96T58 3664 aaKnown RBP1.4□□□□□ -2.19
RC3H2-204ENST00000398671 TENM4Q6N022 2769 aa1.4□□□□□ -2.19
RC3H2-204ENST00000398671 NBEAL1Q6ZS30 2694 aa1.4□□□□□ -2.19
RC3H2-204ENST00000398671 FBN2P35556 2912 aa1.39□□□□□ -2.19
RC3H2-204ENST00000398671 NOTCH1P46531 2555 aa1.39□□□□□ -2.19
RC3H2-204ENST00000398671 COL6A5A8TX70 2615 aa1.38□□□□□ -2.19
RC3H2-204ENST00000398671 MGAM2Q2M2H8 2515 aa1.38□□□□□ -2.19
RC3H2-204ENST00000398671 NBPF19A0A087WUL8 3843 aa1.38□□□□□ -2.19
RC3H2-204ENST00000398671 HIVEP1P15822 2718 aa1.38□□□□□ -2.19
RC3H2-204ENST00000398671 F8P00451 2351 aa1.38□□□□□ -2.19
RC3H2-204ENST00000398671 BSNQ9UPA5 3926 aa1.38□□□□□ -2.19
RC3H2-204ENST00000398671 SVEP1Q4LDE5 3571 aa1.38□□□□□ -2.19
RC3H2-204ENST00000398671 PDZD2O15018 2839 aa1.38□□□□□ -2.19
RC3H2-204ENST00000398671 STAB1Q9NY15 2570 aa1.38□□□□□ -2.19
RC3H2-204ENST00000398671 ZFHX3Q15911 3703 aa1.38□□□□□ -2.19
RC3H2-204ENST00000398671 TENM1Q9UKZ4 2725 aa1.38□□□□□ -2.19
RC3H2-204ENST00000398671 FBN3Q75N90 2809 aa1.37□□□□□ -2.19
RC3H2-204ENST00000398671 SPINK7P58062 85 aa1.37□□□□□ -2.19
RC3H2-204ENST00000398671 OTOGQ6ZRI0 2925 aa1.37□□□□□ -2.19
RC3H2-204ENST00000398671 VWFP04275 2813 aa1.37□□□□□ -2.19
RC3H2-204ENST00000398671 STAB2Q8WWQ8 2551 aa1.37□□□□□ -2.19
RC3H2-204ENST00000398671 COX6B2Q6YFQ2 88 aa1.35□□□□□ -2.19
RC3H2-204ENST00000398671 CSMD1Q96PZ7 3565 aa1.35□□□□□ -2.19
RC3H2-204ENST00000398671 CSMD2Q7Z408 3487 aa1.33□□□□□ -2.2
RC3H2-204ENST00000398671 CRIPTQ9P021 101 aa1.33□□□□□ -2.2
RC3H2-204ENST00000398671 DNHD1Q96M86 4753 aa1.32□□□□□ -2.2
RC3H2-204ENST00000398671 H1FX-AS1Q4G0G2 97 aa1.32□□□□□ -2.2
RC3H2-204ENST00000398671 TENM3Q9P273 2699 aa1.32□□□□□ -2.2
RC3H2-204ENST00000398671 PKD1L1Q8TDX9 2849 aa1.3□□□□□ -2.2
RC3H2-204ENST00000398671 VPS13CQ709C8 3753 aa1.3□□□□□ -2.2
RC3H2-204ENST00000398671 C9orf92A6NGG3 77 aa1.3□□□□□ -2.2
RC3H2-204ENST00000398671 M0QZ58 72 aa1.29□□□□□ -2.2
RC3H2-204ENST00000398671 S4R3F8 94 aa1.29□□□□□ -2.2
RC3H2-204ENST00000398671 MEGF8Q7Z7M0 2845 aa1.28□□□□□ -2.2
RC3H2-204ENST00000398671 TENM2Q9NT68 2774 aa1.27□□□□□ -2.21
RC3H2-204ENST00000398671 AKAP9Q99996 3911 aa1.26□□□□□ -2.21
RC3H2-204ENST00000398671 SMR3BP02814 79 aaPredicted RBP1.26□□□□□ -2.21
RC3H2-204ENST00000398671 CUBNO60494 3623 aa1.26□□□□□ -2.21
RC3H2-204ENST00000398671 SRRM2Q9UQ35 2752 aaKnown RBP1.26□□□□□ -2.21
RC3H2-204ENST00000398671 H0YAA0 97 aa1.25□□□□□ -2.21
RC3H2-204ENST00000398671 TGP01266 2768 aa1.25□□□□□ -2.21
RC3H2-204ENST00000398671 ANK3Q12955 4377 aaKnown RBP1.24□□□□□ -2.21
RC3H2-204ENST00000398671 Q5VSD8 79 aa1.23□□□□□ -2.21
RC3H2-204ENST00000398671 ZNF469Q96JG9 3925 aaPredicted RBP1.23□□□□□ -2.21
RC3H2-204ENST00000398671 TRRAPQ9Y4A5 3859 aa1.23□□□□□ -2.21
RC3H2-204ENST00000398671 COL7A1Q02388 2944 aa1.19□□□□□ -2.22
RC3H2-204ENST00000398671 DMBT1Q9UGM3 2413 aaPredicted RBP1.18□□□□□ -2.22
RC3H2-204ENST00000398671 ANK2Q01484 3957 aa1.18□□□□□ -2.22
RC3H2-204ENST00000398671 HUWE1Q7Z6Z7 4374 aaKnown RBP1.16□□□□□ -2.22
RC3H2-204ENST00000398671 TNP1P09430 55 aa1.16□□□□□ -2.22
RC3H2-204ENST00000398671 RYR3Q15413 4870 aa1.15□□□□□ -2.23
RC3H2-204ENST00000398671 KMT2CQ8NEZ4 4911 aaKnown RBP1.15□□□□□ -2.23
RC3H2-204ENST00000398671 BIRC6Q9NR09 4857 aa1.15□□□□□ -2.23
RC3H2-204ENST00000398671 DNAH1Q9P2D7 4330 aa1.14□□□□□ -2.23
RC3H2-204ENST00000398671 DNAH3Q8TD57 4116 aa1.14□□□□□ -2.23
RC3H2-204ENST00000398671 RYR1P21817 5038 aa1.13□□□□□ -2.23
RC3H2-204ENST00000398671 PRKDCP78527 4128 aaKnown RBP1.13□□□□□ -2.23
RC3H2-204ENST00000398671 PLECQ15149 4684 aaKnown RBP1.13□□□□□ -2.23
RC3H2-204ENST00000398671 DNAH9Q9NYC9 4486 aa1.13□□□□□ -2.23
RC3H2-204ENST00000398671 DYNC2H1Q8NCM8 4307 aaKnown RBP1.12□□□□□ -2.23
RC3H2-204ENST00000398671 EPPK1P58107 5090 aaKnown RBP1.12□□□□□ -2.23
RC3H2-204ENST00000398671 M0R2T5 61 aa1.12□□□□□ -2.23
RC3H2-204ENST00000398671 VPS13DQ5THJ4 4388 aa1.12□□□□□ -2.23
RC3H2-204ENST00000398671 DNAH10Q8IVF4 4471 aa1.11□□□□□ -2.23
RC3H2-204ENST00000398671 CSMD3Q7Z407 3707 aa1.11□□□□□ -2.23
RC3H2-204ENST00000398671 ALMS1Q8TCU4 4167 aa1.11□□□□□ -2.23
RC3H2-204ENST00000398671 LYSTQ99698 3801 aa1.1□□□□□ -2.23
RC3H2-204ENST00000398671 STARD9Q9P2P6 4700 aa1.1□□□□□ -2.23
RC3H2-204ENST00000398671 HYDINQ4G0P3 5121 aa1.1□□□□□ -2.23
RC3H2-204ENST00000398671 DNAH17Q9UFH2 4485 aa1.09□□□□□ -2.23
RC3H2-204ENST00000398671 AHNAK2Q8IVF2 5795 aa1.09□□□□□ -2.23
RC3H2-204ENST00000398671 PCLOQ9Y6V0 5065 aa1.09□□□□□ -2.23
RC3H2-204ENST00000398671 MT1HL1P0DM35 61 aa1.09□□□□□ -2.23
RC3H2-204ENST00000398671 RYR2Q92736 4967 aa1.09□□□□□ -2.24
RC3H2-204ENST00000398671 DNAH2Q9P225 4427 aa1.09□□□□□ -2.24
RC3H2-204ENST00000398671 DNAH5Q8TE73 4624 aa1.09□□□□□ -2.24
RC3H2-204ENST00000398671 DNAH8Q96JB1 4490 aa1.09□□□□□ -2.24
RC3H2-204ENST00000398671 HECTD4Q9Y4D8 3996 aa1.08□□□□□ -2.24
RC3H2-204ENST00000398671 CMYA5Q8N3K9 4069 aa1.08□□□□□ -2.24
RC3H2-204ENST00000398671 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
RC3H2-204ENST00000398671 KRTAP5-10Q6L8G5 202 aa1.08□□□□□ -2.24
RC3H2-204ENST00000398671 KRTAP19-3Q7Z4W3 81 aa1.08□□□□□ -2.24
RC3H2-204ENST00000398671 UBR4Q5T4S7 5183 aa1.08□□□□□ -2.24
RC3H2-204ENST00000398671 LRP1BQ9NZR2 4599 aa1.08□□□□□ -2.24
RC3H2-204ENST00000398671 DNAH7Q8WXX0 4024 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms