RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 DNAH9Q9NYC9 4486 aa5.72□□□□□ -1.49
SOCS6-201ENST00000397942 KIAA1109Q2LD37 5005 aa5.71□□□□□ -1.5
SOCS6-201ENST00000397942 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.5
SOCS6-201ENST00000397942 MYCBP2O75592 4640 aa5.68□□□□□ -1.5
SOCS6-201ENST00000397942 RYR1P21817 5038 aa5.66□□□□□ -1.5
SOCS6-201ENST00000397942 LRP1BQ9NZR2 4599 aa5.62□□□□□ -1.51
SOCS6-201ENST00000397942 DNAH10Q8IVF4 4471 aa5.61□□□□□ -1.51
SOCS6-201ENST00000397942 DNAH1Q9P2D7 4330 aa5.6□□□□□ -1.51
SOCS6-201ENST00000397942 DYNC1H1Q14204 4646 aaKnown RBP5.56□□□□□ -1.52
SOCS6-201ENST00000397942 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
SOCS6-201ENST00000397942 STARD9Q9P2P6 4700 aa5.53□□□□□ -1.52
SOCS6-201ENST00000397942 LORP23490 312 aaPredicted RBP5.52□□□□□ -1.53
SOCS6-201ENST00000397942 VPS13DQ5THJ4 4388 aa5.48□□□□□ -1.53
SOCS6-201ENST00000397942 LYSTQ99698 3801 aa5.47□□□□□ -1.53
SOCS6-201ENST00000397942 PRKDCP78527 4128 aaKnown RBP5.46□□□□□ -1.54
SOCS6-201ENST00000397942 SACSQ9NZJ4 4579 aa5.46□□□□□ -1.54
SOCS6-201ENST00000397942 HYDINQ4G0P3 5121 aa5.45□□□□□ -1.54
SOCS6-201ENST00000397942 DNAH17Q9UFH2 4485 aa5.43□□□□□ -1.54
SOCS6-201ENST00000397942 FAT3Q8TDW7 4589 aa5.43□□□□□ -1.54
SOCS6-201ENST00000397942 DNAH2Q9P225 4427 aa5.41□□□□□ -1.54
SOCS6-201ENST00000397942 RYR3Q15413 4870 aa5.38□□□□□ -1.55
SOCS6-201ENST00000397942 KRTAP4-1Q9BYQ7 146 aa5.34□□□□□ -1.55
SOCS6-201ENST00000397942 LRP1Q07954 4544 aaKnown RBP5.32□□□□□ -1.56
SOCS6-201ENST00000397942 APOBP04114 4563 aaKnown RBP5.31□□□□□ -1.56
SOCS6-201ENST00000397942 KRTAP10-12P60413 245 aa5.3□□□□□ -1.56
SOCS6-201ENST00000397942 KMT2AQ03164 3969 aa5.28□□□□□ -1.56
SOCS6-201ENST00000397942 KRTAP23-1A1A580 65 aa5.25□□□□□ -1.57
SOCS6-201ENST00000397942 KRTAP12-3P60328 96 aa5.25□□□□□ -1.57
SOCS6-201ENST00000397942 VPS13BQ7Z7G8 4022 aa5.24□□□□□ -1.57
SOCS6-201ENST00000397942 LRP2P98164 4655 aa5.24□□□□□ -1.57
SOCS6-201ENST00000397942 LCE3AQ5TA76 89 aa5.21□□□□□ -1.58
SOCS6-201ENST00000397942 ANK2Q01484 3957 aa5.18□□□□□ -1.58
SOCS6-201ENST00000397942 HERC2O95714 4834 aa5.16□□□□□ -1.58
SOCS6-201ENST00000397942 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
SOCS6-201ENST00000397942 DYNC2H1Q8NCM8 4307 aaKnown RBP5.14□□□□□ -1.59
SOCS6-201ENST00000397942 PCLOQ9Y6V0 5065 aa5.13□□□□□ -1.59
SOCS6-201ENST00000397942 ALMS1Q8TCU4 4167 aa5.12□□□□□ -1.59
SOCS6-201ENST00000397942 KRTAP17-1Q9BYP8 105 aa5.11□□□□□ -1.59
SOCS6-201ENST00000397942 FAT2Q9NYQ8 4349 aa5.1□□□□□ -1.59
SOCS6-201ENST00000397942 INE1O15225 51 aa5.06□□□□□ -1.6
SOCS6-201ENST00000397942 SPRR2GQ9BYE4 73 aa5.05□□□□□ -1.6
SOCS6-201ENST00000397942 CMYA5Q8N3K9 4069 aa5.05□□□□□ -1.6
SOCS6-201ENST00000397942 MT2AP02795 61 aa5.04□□□□□ -1.6
SOCS6-201ENST00000397942 DNAH6Q9C0G6 4158 aa5.03□□□□□ -1.6
SOCS6-201ENST00000397942 RYR2Q92736 4967 aa5.02□□□□□ -1.61
SOCS6-201ENST00000397942 MT1HP80294 61 aa5.01□□□□□ -1.61
SOCS6-201ENST00000397942 MT1FP04733 61 aa4.96□□□□□ -1.62
SOCS6-201ENST00000397942 CRCT1Q9UGL9 99 aa4.96□□□□□ -1.62
SOCS6-201ENST00000397942 DNAH3Q8TD57 4116 aa4.96□□□□□ -1.62
SOCS6-201ENST00000397942 PKHD1P08F94 4074 aa4.94□□□□□ -1.62
SOCS6-201ENST00000397942 KMT2CQ8NEZ4 4911 aaKnown RBP4.93□□□□□ -1.62
SOCS6-201ENST00000397942 FRAS1Q86XX4 4008 aa4.91□□□□□ -1.62
SOCS6-201ENST00000397942 KRTAP19-1Q8IUB9 90 aa4.9□□□□□ -1.62
SOCS6-201ENST00000397942 KRTAP8-1Q8IUC2 63 aa4.9□□□□□ -1.63
SOCS6-201ENST00000397942 OBSCNQ5VST9 7968 aa4.88□□□□□ -1.63
SOCS6-201ENST00000397942 DNAH7Q8WXX0 4024 aa4.88□□□□□ -1.63
SOCS6-201ENST00000397942 HECTD4Q9Y4D8 3996 aa4.87□□□□□ -1.63
SOCS6-201ENST00000397942 EPPK1P58107 5090 aaKnown RBP4.81□□□□□ -1.64
SOCS6-201ENST00000397942 UBR4Q5T4S7 5183 aa4.78□□□□□ -1.64
SOCS6-201ENST00000397942 ABCA13Q86UQ4 5058 aa4.74□□□□□ -1.65
SOCS6-201ENST00000397942 KRTAP19-8Q3LI54 63 aa4.73□□□□□ -1.65
SOCS6-201ENST00000397942 FSIP2Q5CZC0 6907 aa4.73□□□□□ -1.65
SOCS6-201ENST00000397942 PKD1P98161 4303 aa4.71□□□□□ -1.66
SOCS6-201ENST00000397942 HERC1Q15751 4861 aa4.7□□□□□ -1.66
SOCS6-201ENST00000397942 KRTAP19-5Q3LI72 72 aa4.69□□□□□ -1.66
SOCS6-201ENST00000397942 BIRC6Q9NR09 4857 aa4.69□□□□□ -1.66
SOCS6-201ENST00000397942 KRTAP10-5P60370 271 aa4.68□□□□□ -1.66
SOCS6-201ENST00000397942 RNF213Q63HN8 5207 aa4.68□□□□□ -1.66
SOCS6-201ENST00000397942 LCE2CQ5TA81 110 aa4.66□□□□□ -1.66
SOCS6-201ENST00000397942 HSPG2P98160 4391 aa4.66□□□□□ -1.66
SOCS6-201ENST00000397942 MUC17Q685J3 4493 aa4.64□□□□□ -1.67
SOCS6-201ENST00000397942 KRTAP10-7P60409 375 aaPredicted RBP4.64□□□□□ -1.67
SOCS6-201ENST00000397942 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
SOCS6-201ENST00000397942 MT1BP07438 61 aa4.63□□□□□ -1.67
SOCS6-201ENST00000397942 MT1XP80297 61 aa4.62□□□□□ -1.67
SOCS6-201ENST00000397942 LCE3CQ5T5A8 94 aa4.61□□□□□ -1.67
SOCS6-201ENST00000397942 LPAP08519 4548 aa4.59□□□□□ -1.67
SOCS6-201ENST00000397942 KRTAP19-2Q3LHN2 52 aa4.58□□□□□ -1.68
SOCS6-201ENST00000397942 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
SOCS6-201ENST00000397942 MUC2Q02817 5179 aa4.52□□□□□ -1.69
SOCS6-201ENST00000397942 FAT4Q6V0I7 4981 aa4.51□□□□□ -1.69
SOCS6-201ENST00000397942 KRTAP9-3Q9BYQ3 159 aa4.48□□□□□ -1.69
SOCS6-201ENST00000397942 KRTAP19-4Q3LI73 84 aa4.47□□□□□ -1.69
SOCS6-201ENST00000397942 SPRR2FQ96RM1 72 aa4.47□□□□□ -1.69
SOCS6-201ENST00000397942 KRTAP4-8A0A0G2JLE6 195 aa4.47□□□□□ -1.69
SOCS6-201ENST00000397942 KRTAP4-8Q9BYQ9 185 aa4.47□□□□□ -1.69
SOCS6-201ENST00000397942 FLGP20930 4061 aaPredicted RBP4.39□□□□□ -1.71
SOCS6-201ENST00000397942 HMCN2Q8NDA2 5059 aa4.34□□□□□ -1.71
SOCS6-201ENST00000397942 LCE2BO14633 110 aa4.33□□□□□ -1.72
SOCS6-201ENST00000397942 DSTQ03001 7570 aaKnown RBP4.32□□□□□ -1.72
SOCS6-201ENST00000397942 FCGBPQ9Y6R7 5405 aaPredicted RBP4.28□□□□□ -1.72
SOCS6-201ENST00000397942 TNXBP22105 4242 aa4.25□□□□□ -1.73
SOCS6-201ENST00000397942 MT1GP13640 62 aa4.23□□□□□ -1.73
SOCS6-201ENST00000397942 KRTAP4-7Q9BYR0 210 aa4.23□□□□□ -1.73
SOCS6-201ENST00000397942 PKHD1L1Q86WI1 4243 aa4.22□□□□□ -1.73
SOCS6-201ENST00000397942 KRTAP12-4P60329 112 aa4.2□□□□□ -1.74
SOCS6-201ENST00000397942 LCE3BQ5TA77 95 aa4.16□□□□□ -1.74
SOCS6-201ENST00000397942 MT1LQ93083 61 aa4.14□□□□□ -1.75
SOCS6-201ENST00000397942 MT1EP04732 61 aa4.11□□□□□ -1.75
SOCS6-201ENST00000397942 KRTAP19-3Q7Z4W3 81 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms