RNA–Protein interactions for RNA: ENST00000397041.7

ATP2A3-205, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A3, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-205ENST00000397041 DNAH8Q96JB1 4490 aa7.25□□□□□ -1.25
ATP2A3-205ENST00000397041 STARD9Q9P2P6 4700 aa7.23□□□□□ -1.25
ATP2A3-205ENST00000397041 DNHD1Q96M86 4753 aa7.22□□□□□ -1.25
ATP2A3-205ENST00000397041 FAT1Q14517 4588 aa7.21□□□□□ -1.26
ATP2A3-205ENST00000397041 LRP1BQ9NZR2 4599 aa7.2□□□□□ -1.26
ATP2A3-205ENST00000397041 VPS13DQ5THJ4 4388 aa7.2□□□□□ -1.26
ATP2A3-205ENST00000397041 DNAH17Q9UFH2 4485 aa7.19□□□□□ -1.26
ATP2A3-205ENST00000397041 DNAH2Q9P225 4427 aa7.14□□□□□ -1.27
ATP2A3-205ENST00000397041 ANK2Q01484 3957 aa7.14□□□□□ -1.27
ATP2A3-205ENST00000397041 LORP23490 312 aaPredicted RBP7.13□□□□□ -1.27
ATP2A3-205ENST00000397041 KRTAP4-5Q9BYR2 181 aa7.1□□□□□ -1.27
ATP2A3-205ENST00000397041 KMT2AQ03164 3969 aa7.09□□□□□ -1.27
ATP2A3-205ENST00000397041 PRO2289Q9P1D8 64 aa7.07□□□□□ -1.28
ATP2A3-205ENST00000397041 LYSTQ99698 3801 aa7.05□□□□□ -1.28
ATP2A3-205ENST00000397041 PRKDCP78527 4128 aaKnown RBP7.04□□□□□ -1.28
ATP2A3-205ENST00000397041 DYNC1H1Q14204 4646 aaKnown RBP7.02□□□□□ -1.29
ATP2A3-205ENST00000397041 MYCBP2O75592 4640 aa7.01□□□□□ -1.29
ATP2A3-205ENST00000397041 FRAS1Q86XX4 4008 aa7□□□□□ -1.29
ATP2A3-205ENST00000397041 DNAH3Q8TD57 4116 aa6.96□□□□□ -1.3
ATP2A3-205ENST00000397041 ALMS1Q8TCU4 4167 aa6.95□□□□□ -1.3
ATP2A3-205ENST00000397041 VPS13BQ7Z7G8 4022 aa6.92□□□□□ -1.3
ATP2A3-205ENST00000397041 SACSQ9NZJ4 4579 aa6.84□□□□□ -1.31
ATP2A3-205ENST00000397041 DNAH6Q9C0G6 4158 aa6.83□□□□□ -1.32
ATP2A3-205ENST00000397041 DNAH7Q8WXX0 4024 aa6.82□□□□□ -1.32
ATP2A3-205ENST00000397041 RYR1P21817 5038 aa6.82□□□□□ -1.32
ATP2A3-205ENST00000397041 DYNC2H1Q8NCM8 4307 aaKnown RBP6.79□□□□□ -1.32
ATP2A3-205ENST00000397041 APOBP04114 4563 aaKnown RBP6.78□□□□□ -1.32
ATP2A3-205ENST00000397041 CMYA5Q8N3K9 4069 aa6.78□□□□□ -1.32
ATP2A3-205ENST00000397041 KRTAP4-1Q9BYQ7 146 aa6.76□□□□□ -1.33
ATP2A3-205ENST00000397041 HECTD4Q9Y4D8 3996 aa6.75□□□□□ -1.33
ATP2A3-205ENST00000397041 LCE3AQ5TA76 89 aa6.73□□□□□ -1.33
ATP2A3-205ENST00000397041 LRP1Q07954 4544 aaKnown RBP6.72□□□□□ -1.33
ATP2A3-205ENST00000397041 FAT3Q8TDW7 4589 aa6.71□□□□□ -1.34
ATP2A3-205ENST00000397041 FAT2Q9NYQ8 4349 aa6.7□□□□□ -1.34
ATP2A3-205ENST00000397041 KRTAP10-12P60413 245 aa6.69□□□□□ -1.34
ATP2A3-205ENST00000397041 KIAA1109Q2LD37 5005 aa6.67□□□□□ -1.34
ATP2A3-205ENST00000397041 KRTAP12-3P60328 96 aa6.63□□□□□ -1.35
ATP2A3-205ENST00000397041 KRTAP23-1A1A580 65 aa6.61□□□□□ -1.35
ATP2A3-205ENST00000397041 INE1O15225 51 aa6.58□□□□□ -1.36
ATP2A3-205ENST00000397041 HYDINQ4G0P3 5121 aa6.5□□□□□ -1.37
ATP2A3-205ENST00000397041 RYR3Q15413 4870 aa6.49□□□□□ -1.37
ATP2A3-205ENST00000397041 KRTAP17-1Q9BYP8 105 aa6.49□□□□□ -1.37
ATP2A3-205ENST00000397041 PKHD1P08F94 4074 aa6.48□□□□□ -1.37
ATP2A3-205ENST00000397041 LRP2P98164 4655 aa6.45□□□□□ -1.38
ATP2A3-205ENST00000397041 CRCT1Q9UGL9 99 aa6.35□□□□□ -1.39
ATP2A3-205ENST00000397041 SPRR2GQ9BYE4 73 aa6.3□□□□□ -1.4
ATP2A3-205ENST00000397041 MT1HP80294 61 aa6.27□□□□□ -1.41
ATP2A3-205ENST00000397041 MT2AP02795 61 aa6.27□□□□□ -1.41
ATP2A3-205ENST00000397041 RYR2Q92736 4967 aa6.25□□□□□ -1.41
ATP2A3-205ENST00000397041 MT1FP04733 61 aa6.22□□□□□ -1.41
ATP2A3-205ENST00000397041 KMT2CQ8NEZ4 4911 aaKnown RBP6.21□□□□□ -1.42
ATP2A3-205ENST00000397041 PKD1P98161 4303 aa6.17□□□□□ -1.42
ATP2A3-205ENST00000397041 HSPG2P98160 4391 aa6.16□□□□□ -1.42
ATP2A3-205ENST00000397041 LPAP08519 4548 aa6.14□□□□□ -1.43
ATP2A3-205ENST00000397041 KRTAP19-1Q8IUB9 90 aa6.11□□□□□ -1.43
ATP2A3-205ENST00000397041 KRTAP8-1Q8IUC2 63 aa6.1□□□□□ -1.43
ATP2A3-205ENST00000397041 HERC2O95714 4834 aa6.08□□□□□ -1.44
ATP2A3-205ENST00000397041 KRTAP19-5Q3LI72 72 aa6.01□□□□□ -1.45
ATP2A3-205ENST00000397041 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
ATP2A3-205ENST00000397041 BIRC6Q9NR09 4857 aa5.97□□□□□ -1.45
ATP2A3-205ENST00000397041 KRTAP10-7P60409 375 aaPredicted RBP5.95□□□□□ -1.46
ATP2A3-205ENST00000397041 LCE3CQ5T5A8 94 aa5.91□□□□□ -1.46
ATP2A3-205ENST00000397041 SPRR5A0A1B0GTR4 108 aa5.9□□□□□ -1.46
ATP2A3-205ENST00000397041 TNXBP22105 4242 aa5.9□□□□□ -1.47
ATP2A3-205ENST00000397041 PKHD1L1Q86WI1 4243 aa5.89□□□□□ -1.47
ATP2A3-205ENST00000397041 EPPK1P58107 5090 aaKnown RBP5.87□□□□□ -1.47
ATP2A3-205ENST00000397041 MT1XP80297 61 aa5.86□□□□□ -1.47
ATP2A3-205ENST00000397041 KRTAP19-8Q3LI54 63 aa5.85□□□□□ -1.47
ATP2A3-205ENST00000397041 LCE2CQ5TA81 110 aa5.81□□□□□ -1.48
ATP2A3-205ENST00000397041 MT1BP07438 61 aa5.8□□□□□ -1.48
ATP2A3-205ENST00000397041 KRTAP19-2Q3LHN2 52 aa5.78□□□□□ -1.48
ATP2A3-205ENST00000397041 KRTAP9-8Q9BYQ0 159 aa5.77□□□□□ -1.49
ATP2A3-205ENST00000397041 MUC17Q685J3 4493 aa5.76□□□□□ -1.49
ATP2A3-205ENST00000397041 PCLOQ9Y6V0 5065 aa5.75□□□□□ -1.49
ATP2A3-205ENST00000397041 ABCA13Q86UQ4 5058 aa5.71□□□□□ -1.49
ATP2A3-205ENST00000397041 HERC1Q15751 4861 aa5.68□□□□□ -1.5
ATP2A3-205ENST00000397041 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
ATP2A3-205ENST00000397041 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
ATP2A3-205ENST00000397041 FLGP20930 4061 aaPredicted RBP5.64□□□□□ -1.51
ATP2A3-205ENST00000397041 MUC2Q02817 5179 aa5.61□□□□□ -1.51
ATP2A3-205ENST00000397041 UBR4Q5T4S7 5183 aa5.56□□□□□ -1.52
ATP2A3-205ENST00000397041 KRTAP9-3Q9BYQ3 159 aa5.56□□□□□ -1.52
ATP2A3-205ENST00000397041 SPRR2FQ96RM1 72 aa5.51□□□□□ -1.53
ATP2A3-205ENST00000397041 FAT4Q6V0I7 4981 aa5.48□□□□□ -1.53
ATP2A3-205ENST00000397041 KRTAP4-7Q9BYR0 210 aa5.48□□□□□ -1.53
ATP2A3-205ENST00000397041 MT1GP13640 62 aa5.42□□□□□ -1.54
ATP2A3-205ENST00000397041 RNF213Q63HN8 5207 aa5.42□□□□□ -1.54
ATP2A3-205ENST00000397041 HMCN2Q8NDA2 5059 aa5.42□□□□□ -1.54
ATP2A3-205ENST00000397041 FSIP2Q5CZC0 6907 aa5.4□□□□□ -1.55
ATP2A3-205ENST00000397041 KRTAP12-4P60329 112 aa5.4□□□□□ -1.55
ATP2A3-205ENST00000397041 KRTAP19-4Q3LI73 84 aa5.37□□□□□ -1.55
ATP2A3-205ENST00000397041 LCE2BO14633 110 aa5.37□□□□□ -1.55
ATP2A3-205ENST00000397041 LCE3BQ5TA77 95 aa5.36□□□□□ -1.55
ATP2A3-205ENST00000397041 SYNE1Q8NF91 8797 aaKnown RBP5.33□□□□□ -1.56
ATP2A3-205ENST00000397041 MT1LQ93083 61 aa5.23□□□□□ -1.57
ATP2A3-205ENST00000397041 MT1EP04732 61 aa5.17□□□□□ -1.58
ATP2A3-205ENST00000397041 LOC100996750A0A140TA64 210 aa5.1□□□□□ -1.59
ATP2A3-205ENST00000397041 OBSCNQ5VST9 7968 aa5.09□□□□□ -1.59
ATP2A3-205ENST00000397041 KRTAP4-3Q9BYR4 195 aa5.07□□□□□ -1.6
ATP2A3-205ENST00000397041 KRTAP19-3Q7Z4W3 81 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms