RNA–Protein interactions for RNA: ENST00000396356.7

SOX6-202, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SOX6, Length 8,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-202ENST00000396356 ALMS1Q8TCU4 4167 aa3.38□□□□□ -1.87
SOX6-202ENST00000396356 SPRR2GQ9BYE4 73 aa3.34□□□□□ -1.88
SOX6-202ENST00000396356 HUWE1Q7Z6Z7 4374 aaKnown RBP3.33□□□□□ -1.88
SOX6-202ENST00000396356 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
SOX6-202ENST00000396356 LCE3AQ5TA76 89 aa3.31□□□□□ -1.88
SOX6-202ENST00000396356 LYSTQ99698 3801 aa3.28□□□□□ -1.88
SOX6-202ENST00000396356 KRTAP10-7P60409 375 aaPredicted RBP3.2□□□□□ -1.9
SOX6-202ENST00000396356 LORP23490 312 aaPredicted RBP3.19□□□□□ -1.9
SOX6-202ENST00000396356 KRTAP10-5P60370 271 aa3.18□□□□□ -1.9
SOX6-202ENST00000396356 DNAH1Q9P2D7 4330 aa3.17□□□□□ -1.9
SOX6-202ENST00000396356 DNAH7Q8WXX0 4024 aa3.17□□□□□ -1.9
SOX6-202ENST00000396356 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
SOX6-202ENST00000396356 HECTD4Q9Y4D8 3996 aa3.13□□□□□ -1.91
SOX6-202ENST00000396356 DNAH3Q8TD57 4116 aa3.11□□□□□ -1.91
SOX6-202ENST00000396356 KMT2AQ03164 3969 aa3.11□□□□□ -1.91
SOX6-202ENST00000396356 CRCT1Q9UGL9 99 aa3.09□□□□□ -1.91
SOX6-202ENST00000396356 PRKDCP78527 4128 aaKnown RBP3.08□□□□□ -1.92
SOX6-202ENST00000396356 KRTAP19-8Q3LI54 63 aa3.05□□□□□ -1.92
SOX6-202ENST00000396356 MT1HP80294 61 aa3.04□□□□□ -1.92
SOX6-202ENST00000396356 MT2AP02795 61 aa3.03□□□□□ -1.92
SOX6-202ENST00000396356 MT3P25713 68 aa3.01□□□□□ -1.93
SOX6-202ENST00000396356 FRAS1Q86XX4 4008 aa3.01□□□□□ -1.93
SOX6-202ENST00000396356 VPS13BQ7Z7G8 4022 aa3.01□□□□□ -1.93
SOX6-202ENST00000396356 SPRR5A0A1B0GTR4 108 aa3.01□□□□□ -1.93
SOX6-202ENST00000396356 DNAH10Q8IVF4 4471 aa2.99□□□□□ -1.93
SOX6-202ENST00000396356 DNAH6Q9C0G6 4158 aa2.96□□□□□ -1.93
SOX6-202ENST00000396356 KRTAP19-5Q3LI72 72 aa2.96□□□□□ -1.93
SOX6-202ENST00000396356 KRTAP12-4P60329 112 aa2.96□□□□□ -1.94
SOX6-202ENST00000396356 SPRR2FQ96RM1 72 aa2.93□□□□□ -1.94
SOX6-202ENST00000396356 MT1GP13640 62 aa2.92□□□□□ -1.94
SOX6-202ENST00000396356 KRTAP4-5Q9BYR2 181 aa2.91□□□□□ -1.94
SOX6-202ENST00000396356 LRP1Q07954 4544 aaKnown RBP2.91□□□□□ -1.94
SOX6-202ENST00000396356 DNAH11Q96DT5 4516 aa2.89□□□□□ -1.95
SOX6-202ENST00000396356 DNAH2Q9P225 4427 aa2.89□□□□□ -1.95
SOX6-202ENST00000396356 MT1FP04733 61 aa2.88□□□□□ -1.95
SOX6-202ENST00000396356 ANK3Q12955 4377 aaKnown RBP2.88□□□□□ -1.95
SOX6-202ENST00000396356 FLGP20930 4061 aaPredicted RBP2.87□□□□□ -1.95
SOX6-202ENST00000396356 PKHD1P08F94 4074 aa2.81□□□□□ -1.96
SOX6-202ENST00000396356 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
SOX6-202ENST00000396356 MT1LQ93083 61 aa2.8□□□□□ -1.96
SOX6-202ENST00000396356 KRTAP19-1Q8IUB9 90 aa2.8□□□□□ -1.96
SOX6-202ENST00000396356 KRTAP4-1Q9BYQ7 146 aa2.8□□□□□ -1.96
SOX6-202ENST00000396356 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
SOX6-202ENST00000396356 LCE2BO14633 110 aa2.79□□□□□ -1.96
SOX6-202ENST00000396356 DYNC1H1Q14204 4646 aaKnown RBP2.78□□□□□ -1.97
SOX6-202ENST00000396356 MT1XP80297 61 aa2.77□□□□□ -1.97
SOX6-202ENST00000396356 MYCBP2O75592 4640 aa2.77□□□□□ -1.97
SOX6-202ENST00000396356 SPRR2EP22531 72 aa2.73□□□□□ -1.97
SOX6-202ENST00000396356 SPRR2BP35325 72 aa2.73□□□□□ -1.97
SOX6-202ENST00000396356 SPRR2AP35326 72 aa2.73□□□□□ -1.97
SOX6-202ENST00000396356 SPRR2DP22532 72 aa2.72□□□□□ -1.97
SOX6-202ENST00000396356 FAT2Q9NYQ8 4349 aa2.71□□□□□ -1.98
SOX6-202ENST00000396356 DNAH5Q8TE73 4624 aa2.7□□□□□ -1.98
SOX6-202ENST00000396356 MT1EP04732 61 aa2.7□□□□□ -1.98
SOX6-202ENST00000396356 DYNC2H1Q8NCM8 4307 aaKnown RBP2.7□□□□□ -1.98
SOX6-202ENST00000396356 KRTAP19-3Q7Z4W3 81 aa2.69□□□□□ -1.98
SOX6-202ENST00000396356 LCE3BQ5TA77 95 aa2.66□□□□□ -1.98
SOX6-202ENST00000396356 RYR1P21817 5038 aa2.65□□□□□ -1.99
SOX6-202ENST00000396356 MT1BP07438 61 aa2.65□□□□□ -1.99
SOX6-202ENST00000396356 DNAH17Q9UFH2 4485 aa2.64□□□□□ -1.99
SOX6-202ENST00000396356 KRTAP9-8Q9BYQ0 159 aa2.62□□□□□ -1.99
SOX6-202ENST00000396356 HSPG2P98160 4391 aa2.62□□□□□ -1.99
SOX6-202ENST00000396356 LCE2CQ5TA81 110 aa2.61□□□□□ -1.99
SOX6-202ENST00000396356 VPS13DQ5THJ4 4388 aa2.61□□□□□ -1.99
SOX6-202ENST00000396356 KRTAP9-3Q9BYQ3 159 aa2.61□□□□□ -1.99
SOX6-202ENST00000396356 PLECQ15149 4684 aaKnown RBP2.59□□□□□ -1.99
SOX6-202ENST00000396356 DNAH9Q9NYC9 4486 aa2.59□□□□□ -2
SOX6-202ENST00000396356 DNAH8Q96JB1 4490 aa2.58□□□□□ -2
SOX6-202ENST00000396356 PKHD1L1Q86WI1 4243 aa2.58□□□□□ -2
SOX6-202ENST00000396356 MT1MQ8N339 61 aa2.57□□□□□ -2
SOX6-202ENST00000396356 LRP1BQ9NZR2 4599 aa2.57□□□□□ -2
SOX6-202ENST00000396356 KRTAP19-6Q3LI70 58 aa2.53□□□□□ -2
SOX6-202ENST00000396356 PKD1P98161 4303 aa2.53□□□□□ -2
SOX6-202ENST00000396356 SACSQ9NZJ4 4579 aa2.53□□□□□ -2
SOX6-202ENST00000396356 MT1AP04731 61 aa2.53□□□□□ -2.01
SOX6-202ENST00000396356 STARD9Q9P2P6 4700 aa2.51□□□□□ -2.01
SOX6-202ENST00000396356 APOBP04114 4563 aaKnown RBP2.5□□□□□ -2.01
SOX6-202ENST00000396356 LCE1AQ5T7P2 110 aa2.5□□□□□ -2.01
SOX6-202ENST00000396356 PCLOQ9Y6V0 5065 aa2.48□□□□□ -2.01
SOX6-202ENST00000396356 FAT3Q8TDW7 4589 aa2.48□□□□□ -2.01
SOX6-202ENST00000396356 KRTAP2-3P0C7H8 128 aa2.45□□□□□ -2.02
SOX6-202ENST00000396356 LCE2DQ5TA82 110 aaPredicted RBP2.45□□□□□ -2.02
SOX6-202ENST00000396356 KRTAP2-4Q9BYR9 128 aa2.45□□□□□ -2.02
SOX6-202ENST00000396356 KRTAP2-1Q9BYU5 128 aa2.45□□□□□ -2.02
SOX6-202ENST00000396356 RYR3Q15413 4870 aa2.4□□□□□ -2.02
SOX6-202ENST00000396356 FAT1Q14517 4588 aa2.39□□□□□ -2.03
SOX6-202ENST00000396356 PRM1P04553 51 aa2.37□□□□□ -2.03
SOX6-202ENST00000396356 RYR2Q92736 4967 aa2.35□□□□□ -2.03
SOX6-202ENST00000396356 KRTAP19-2Q3LHN2 52 aa2.35□□□□□ -2.03
SOX6-202ENST00000396356 TNXBP22105 4242 aa2.35□□□□□ -2.03
SOX6-202ENST00000396356 LCE4AQ5TA78 99 aa2.34□□□□□ -2.03
SOX6-202ENST00000396356 DNHD1Q96M86 4753 aa2.33□□□□□ -2.04
SOX6-202ENST00000396356 HERC2O95714 4834 aa2.31□□□□□ -2.04
SOX6-202ENST00000396356 KRTAP4-8A0A0G2JLE6 195 aa2.3□□□□□ -2.04
SOX6-202ENST00000396356 KRTAP4-8Q9BYQ9 185 aa2.3□□□□□ -2.04
SOX6-202ENST00000396356 BIRC6Q9NR09 4857 aa2.29□□□□□ -2.04
SOX6-202ENST00000396356 LRP2P98164 4655 aa2.29□□□□□ -2.04
SOX6-202ENST00000396356 KRTAP19-7Q3SYF9 63 aa2.26□□□□□ -2.05
SOX6-202ENST00000396356 HERC1Q15751 4861 aa2.26□□□□□ -2.05
SOX6-202ENST00000396356 KRTAP6-3Q3LI67 103 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms