RNA–Protein interactions for RNA: ENST00000396208.3

CCP110-202, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCP110, Length 5,151 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-202ENST00000396208 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
CCP110-202ENST00000396208 KRTAP17-1Q9BYP8 105 aa3.13□□□□□ -1.91
CCP110-202ENST00000396208 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
CCP110-202ENST00000396208 DYNC1H1Q14204 4646 aaKnown RBP3.12□□□□□ -1.91
CCP110-202ENST00000396208 KRTAP19-4Q3LI73 84 aa3.12□□□□□ -1.91
CCP110-202ENST00000396208 KRTAP4-1Q9BYQ7 146 aa3.12□□□□□ -1.91
CCP110-202ENST00000396208 LAMA5O15230 3695 aa3.11□□□□□ -1.91
CCP110-202ENST00000396208 SPRR2FQ96RM1 72 aa3.1□□□□□ -1.91
CCP110-202ENST00000396208 SPRR2GQ9BYE4 73 aa3.1□□□□□ -1.91
CCP110-202ENST00000396208 LRP1BQ9NZR2 4599 aa3.1□□□□□ -1.91
CCP110-202ENST00000396208 CRCT1Q9UGL9 99 aa3.1□□□□□ -1.91
CCP110-202ENST00000396208 KRTAP3-2Q9BYR7 98 aa3.1□□□□□ -1.91
CCP110-202ENST00000396208 DNAH2Q9P225 4427 aa3.1□□□□□ -1.91
CCP110-202ENST00000396208 CSMD1Q96PZ7 3565 aa3.1□□□□□ -1.91
CCP110-202ENST00000396208 KRTAP10-7P60409 375 aaPredicted RBP3.07□□□□□ -1.92
CCP110-202ENST00000396208 CUBNO60494 3623 aa3.07□□□□□ -1.92
CCP110-202ENST00000396208 RYR1P21817 5038 aa3.06□□□□□ -1.92
CCP110-202ENST00000396208 HERC1Q15751 4861 aa3.06□□□□□ -1.92
CCP110-202ENST00000396208 MT1FP04733 61 aa3.05□□□□□ -1.92
CCP110-202ENST00000396208 VPS13DQ5THJ4 4388 aa3.04□□□□□ -1.92
CCP110-202ENST00000396208 DYNC2H1Q8NCM8 4307 aaKnown RBP3.04□□□□□ -1.92
CCP110-202ENST00000396208 AKAP9Q99996 3911 aa3.04□□□□□ -1.92
CCP110-202ENST00000396208 CSMD3Q7Z407 3707 aa3.02□□□□□ -1.93
CCP110-202ENST00000396208 FAT2Q9NYQ8 4349 aa3.02□□□□□ -1.93
CCP110-202ENST00000396208 SPRR2EP22531 72 aa3.02□□□□□ -1.93
CCP110-202ENST00000396208 SPRR2BP35325 72 aa3.02□□□□□ -1.93
CCP110-202ENST00000396208 SPRR2AP35326 72 aa3.02□□□□□ -1.93
CCP110-202ENST00000396208 LCE3AQ5TA76 89 aa3□□□□□ -1.93
CCP110-202ENST00000396208 DNAH17Q9UFH2 4485 aa2.99□□□□□ -1.93
CCP110-202ENST00000396208 RYR3Q15413 4870 aa2.99□□□□□ -1.93
CCP110-202ENST00000396208 ANK2Q01484 3957 aa2.98□□□□□ -1.93
CCP110-202ENST00000396208 RYR2Q92736 4967 aa2.97□□□□□ -1.93
CCP110-202ENST00000396208 HERC2O95714 4834 aa2.97□□□□□ -1.93
CCP110-202ENST00000396208 KRTAP9-6A0A140TA67 174 aa2.96□□□□□ -1.93
CCP110-202ENST00000396208 KRTAP9-2Q9BYQ4 174 aa2.96□□□□□ -1.93
CCP110-202ENST00000396208 DNAH6Q9C0G6 4158 aa2.96□□□□□ -1.94
CCP110-202ENST00000396208 PCLOQ9Y6V0 5065 aa2.96□□□□□ -1.94
CCP110-202ENST00000396208 SPRR2DP22532 72 aa2.95□□□□□ -1.94
CCP110-202ENST00000396208 KRTAP19-8Q3LI54 63 aa2.95□□□□□ -1.94
CCP110-202ENST00000396208 LCE2DQ5TA82 110 aaPredicted RBP2.95□□□□□ -1.94
CCP110-202ENST00000396208 H3BS24 57 aa2.94□□□□□ -1.94
CCP110-202ENST00000396208 KRTAP10-5P60370 271 aa2.94□□□□□ -1.94
CCP110-202ENST00000396208 MYCBP2O75592 4640 aa2.94□□□□□ -1.94
CCP110-202ENST00000396208 SACSQ9NZJ4 4579 aa2.93□□□□□ -1.94
CCP110-202ENST00000396208 ZNF469Q96JG9 3925 aaPredicted RBP2.92□□□□□ -1.94
CCP110-202ENST00000396208 DNAH8Q96JB1 4490 aa2.91□□□□□ -1.94
CCP110-202ENST00000396208 SVEP1Q4LDE5 3571 aa2.91□□□□□ -1.94
CCP110-202ENST00000396208 LCE2BO14633 110 aa2.91□□□□□ -1.94
CCP110-202ENST00000396208 KIAA1109Q2LD37 5005 aa2.9□□□□□ -1.95
CCP110-202ENST00000396208 KRTAP19-1Q8IUB9 90 aa2.89□□□□□ -1.95
CCP110-202ENST00000396208 DNAH3Q8TD57 4116 aa2.89□□□□□ -1.95
CCP110-202ENST00000396208 HSPG2P98160 4391 aa2.89□□□□□ -1.95
CCP110-202ENST00000396208 LCE2CQ5TA81 110 aa2.88□□□□□ -1.95
CCP110-202ENST00000396208 PRKDCP78527 4128 aaKnown RBP2.88□□□□□ -1.95
CCP110-202ENST00000396208 FAT3Q8TDW7 4589 aa2.87□□□□□ -1.95
CCP110-202ENST00000396208 STARD9Q9P2P6 4700 aa2.86□□□□□ -1.95
CCP110-202ENST00000396208 PKHD1L1Q86WI1 4243 aa2.86□□□□□ -1.95
CCP110-202ENST00000396208 LRP1Q07954 4544 aaKnown RBP2.85□□□□□ -1.95
CCP110-202ENST00000396208 FAT1Q14517 4588 aa2.84□□□□□ -1.95
CCP110-202ENST00000396208 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
CCP110-202ENST00000396208 APOBP04114 4563 aaKnown RBP2.84□□□□□ -1.95
CCP110-202ENST00000396208 KRTAP9-8Q9BYQ0 159 aa2.84□□□□□ -1.96
CCP110-202ENST00000396208 KRTAP9-3Q9BYQ3 159 aa2.81□□□□□ -1.96
CCP110-202ENST00000396208 INE1O15225 51 aa2.81□□□□□ -1.96
CCP110-202ENST00000396208 KRTAP19-5Q3LI72 72 aa2.8□□□□□ -1.96
CCP110-202ENST00000396208 MT1GP13640 62 aa2.78□□□□□ -1.96
CCP110-202ENST00000396208 KRTAP19-6Q3LI70 58 aa2.77□□□□□ -1.97
CCP110-202ENST00000396208 MT1BP07438 61 aa2.74□□□□□ -1.97
CCP110-202ENST00000396208 LCE2AQ5TA79 106 aaPredicted RBP2.73□□□□□ -1.97
CCP110-202ENST00000396208 KMT2CQ8NEZ4 4911 aaKnown RBP2.73□□□□□ -1.97
CCP110-202ENST00000396208 DNAH7Q8WXX0 4024 aa2.73□□□□□ -1.97
CCP110-202ENST00000396208 PKD1P98161 4303 aa2.73□□□□□ -1.97
CCP110-202ENST00000396208 KRTAP9-7A8MTY7 169 aa2.72□□□□□ -1.97
CCP110-202ENST00000396208 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
CCP110-202ENST00000396208 LCE3CQ5T5A8 94 aa2.71□□□□□ -1.98
CCP110-202ENST00000396208 VPS13BQ7Z7G8 4022 aa2.7□□□□□ -1.98
CCP110-202ENST00000396208 MT1XP80297 61 aa2.7□□□□□ -1.98
CCP110-202ENST00000396208 FRAS1Q86XX4 4008 aa2.69□□□□□ -1.98
CCP110-202ENST00000396208 EPPK1P58107 5090 aaKnown RBP2.68□□□□□ -1.98
CCP110-202ENST00000396208 KRTAP6-3Q3LI67 103 aa2.68□□□□□ -1.98
CCP110-202ENST00000396208 VPS13CQ709C8 3753 aa2.67□□□□□ -1.98
CCP110-202ENST00000396208 ABCA13Q86UQ4 5058 aa2.66□□□□□ -1.98
CCP110-202ENST00000396208 CMYA5Q8N3K9 4069 aa2.65□□□□□ -1.98
CCP110-202ENST00000396208 KRTAP19-3Q7Z4W3 81 aa2.64□□□□□ -1.99
CCP110-202ENST00000396208 LCE3BQ5TA77 95 aa2.64□□□□□ -1.99
CCP110-202ENST00000396208 KRTAP2-3P0C7H8 128 aa2.62□□□□□ -1.99
CCP110-202ENST00000396208 KRTAP2-4Q9BYR9 128 aa2.62□□□□□ -1.99
CCP110-202ENST00000396208 KRTAP19-2Q3LHN2 52 aa2.61□□□□□ -1.99
CCP110-202ENST00000396208 KMT2AQ03164 3969 aa2.6□□□□□ -1.99
CCP110-202ENST00000396208 LRP2P98164 4655 aa2.6□□□□□ -1.99
CCP110-202ENST00000396208 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.58□□□□□ -2
CCP110-202ENST00000396208 LYSTQ99698 3801 aa2.58□□□□□ -2
CCP110-202ENST00000396208 LCE1AQ5T7P2 110 aa2.57□□□□□ -2
CCP110-202ENST00000396208 HECTD4Q9Y4D8 3996 aa2.53□□□□□ -2
CCP110-202ENST00000396208 KRTAP2-2Q9BYT5 123 aa2.52□□□□□ -2.01
CCP110-202ENST00000396208 KRTAP2-1Q9BYU5 128 aa2.52□□□□□ -2.01
CCP110-202ENST00000396208 KRTAP4-8A0A0G2JLE6 195 aa2.51□□□□□ -2.01
CCP110-202ENST00000396208 KRTAP4-8Q9BYQ9 185 aa2.51□□□□□ -2.01
CCP110-202ENST00000396208 HYDINQ4G0P3 5121 aa2.51□□□□□ -2.01
CCP110-202ENST00000396208 MT1LQ93083 61 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms