RNA–Protein interactions for RNA: ENST00000396128.8

KLHL28-202, Transcript of kelch like family member 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL28, Length 6,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28-202ENST00000396128 DNAH2Q9P225 4427 aa2.4□□□□□ -2.03
KLHL28-202ENST00000396128 SPRR2GQ9BYE4 73 aa2.39□□□□□ -2.03
KLHL28-202ENST00000396128 VPS13CQ709C8 3753 aa2.37□□□□□ -2.03
KLHL28-202ENST00000396128 ZANQ9Y493 2812 aa2.37□□□□□ -2.03
KLHL28-202ENST00000396128 OTOGQ6ZRI0 2925 aa2.36□□□□□ -2.03
KLHL28-202ENST00000396128 KRTAP4-1Q9BYQ7 146 aa2.35□□□□□ -2.03
KLHL28-202ENST00000396128 FBN3Q75N90 2809 aa2.34□□□□□ -2.03
KLHL28-202ENST00000396128 SPRR2EP22531 72 aa2.33□□□□□ -2.04
KLHL28-202ENST00000396128 SPRR2BP35325 72 aa2.33□□□□□ -2.04
KLHL28-202ENST00000396128 SPRR2AP35326 72 aa2.33□□□□□ -2.04
KLHL28-202ENST00000396128 DNAH10Q8IVF4 4471 aa2.32□□□□□ -2.04
KLHL28-202ENST00000396128 FBN1P35555 2871 aaKnown RBP2.32□□□□□ -2.04
KLHL28-202ENST00000396128 MT1FP04733 61 aa2.31□□□□□ -2.04
KLHL28-202ENST00000396128 DNAH11Q96DT5 4516 aa2.29□□□□□ -2.04
KLHL28-202ENST00000396128 ZNF469Q96JG9 3925 aaPredicted RBP2.29□□□□□ -2.04
KLHL28-202ENST00000396128 PKD1L1Q8TDX9 2849 aa2.29□□□□□ -2.04
KLHL28-202ENST00000396128 KRTAP19-5Q3LI72 72 aa2.29□□□□□ -2.04
KLHL28-202ENST00000396128 VWFP04275 2813 aa2.28□□□□□ -2.04
KLHL28-202ENST00000396128 DNAH9Q9NYC9 4486 aa2.28□□□□□ -2.04
KLHL28-202ENST00000396128 SPRR2DP22532 72 aa2.27□□□□□ -2.05
KLHL28-202ENST00000396128 FRAS1Q86XX4 4008 aa2.27□□□□□ -2.05
KLHL28-202ENST00000396128 LCE3CQ5T5A8 94 aa2.27□□□□□ -2.05
KLHL28-202ENST00000396128 LYSTQ99698 3801 aa2.25□□□□□ -2.05
KLHL28-202ENST00000396128 DYNC1H1Q14204 4646 aaKnown RBP2.24□□□□□ -2.05
KLHL28-202ENST00000396128 LCE2BO14633 110 aa2.24□□□□□ -2.05
KLHL28-202ENST00000396128 KRTAP19-8Q3LI54 63 aa2.22□□□□□ -2.05
KLHL28-202ENST00000396128 DNAH5Q8TE73 4624 aa2.22□□□□□ -2.05
KLHL28-202ENST00000396128 MEGF8Q7Z7M0 2845 aa2.21□□□□□ -2.05
KLHL28-202ENST00000396128 KRTAP12-4P60329 112 aa2.21□□□□□ -2.06
KLHL28-202ENST00000396128 DNAH17Q9UFH2 4485 aa2.2□□□□□ -2.06
KLHL28-202ENST00000396128 HERC1Q15751 4861 aa2.2□□□□□ -2.06
KLHL28-202ENST00000396128 PLECQ15149 4684 aaKnown RBP2.2□□□□□ -2.06
KLHL28-202ENST00000396128 ANK2Q01484 3957 aa2.19□□□□□ -2.06
KLHL28-202ENST00000396128 DNAH6Q9C0G6 4158 aa2.19□□□□□ -2.06
KLHL28-202ENST00000396128 FAT2Q9NYQ8 4349 aa2.18□□□□□ -2.06
KLHL28-202ENST00000396128 CSMD3Q7Z407 3707 aa2.17□□□□□ -2.06
KLHL28-202ENST00000396128 DNAH3Q8TD57 4116 aa2.16□□□□□ -2.06
KLHL28-202ENST00000396128 TRRAPQ9Y4A5 3859 aa2.16□□□□□ -2.06
KLHL28-202ENST00000396128 VPS13DQ5THJ4 4388 aa2.16□□□□□ -2.06
KLHL28-202ENST00000396128 DYNC2H1Q8NCM8 4307 aaKnown RBP2.15□□□□□ -2.06
KLHL28-202ENST00000396128 CMYA5Q8N3K9 4069 aa2.15□□□□□ -2.07
KLHL28-202ENST00000396128 MYCBP2O75592 4640 aa2.14□□□□□ -2.07
KLHL28-202ENST00000396128 HSPG2P98160 4391 aa2.14□□□□□ -2.07
KLHL28-202ENST00000396128 MT1GP13640 62 aa2.14□□□□□ -2.07
KLHL28-202ENST00000396128 KRTAP19-1Q8IUB9 90 aa2.13□□□□□ -2.07
KLHL28-202ENST00000396128 DNAH8Q96JB1 4490 aa2.12□□□□□ -2.07
KLHL28-202ENST00000396128 SACSQ9NZJ4 4579 aa2.12□□□□□ -2.07
KLHL28-202ENST00000396128 MT1XP80297 61 aa2.09□□□□□ -2.07
KLHL28-202ENST00000396128 LCE2CQ5TA81 110 aa2.09□□□□□ -2.07
KLHL28-202ENST00000396128 LCE3BQ5TA77 95 aa2.09□□□□□ -2.08
KLHL28-202ENST00000396128 LRP1BQ9NZR2 4599 aa2.09□□□□□ -2.08
KLHL28-202ENST00000396128 DNAH7Q8WXX0 4024 aa2.09□□□□□ -2.08
KLHL28-202ENST00000396128 COL7A1Q02388 2944 aa2.08□□□□□ -2.08
KLHL28-202ENST00000396128 KRTAP9-8Q9BYQ0 159 aa2.08□□□□□ -2.08
KLHL28-202ENST00000396128 MT1BP07438 61 aa2.07□□□□□ -2.08
KLHL28-202ENST00000396128 LRP1Q07954 4544 aaKnown RBP2.07□□□□□ -2.08
KLHL28-202ENST00000396128 LCE2DQ5TA82 110 aaPredicted RBP2.06□□□□□ -2.08
KLHL28-202ENST00000396128 KRTAP9-3Q9BYQ3 159 aa2.06□□□□□ -2.08
KLHL28-202ENST00000396128 FAT1Q14517 4588 aa2.05□□□□□ -2.08
KLHL28-202ENST00000396128 PRKDCP78527 4128 aaKnown RBP2.04□□□□□ -2.08
KLHL28-202ENST00000396128 FAT3Q8TDW7 4589 aa2.04□□□□□ -2.08
KLHL28-202ENST00000396128 PKHD1L1Q86WI1 4243 aa2.03□□□□□ -2.08
KLHL28-202ENST00000396128 SRRM2Q9UQ35 2752 aaKnown RBP2.03□□□□□ -2.08
KLHL28-202ENST00000396128 KRTAP19-3Q7Z4W3 81 aa2.03□□□□□ -2.09
KLHL28-202ENST00000396128 APOBP04114 4563 aaKnown RBP2.02□□□□□ -2.09
KLHL28-202ENST00000396128 LCE3DQ9BYE3 92 aa2□□□□□ -2.09
KLHL28-202ENST00000396128 KRTAP9-2Q9BYQ4 174 aa2□□□□□ -2.09
KLHL28-202ENST00000396128 KRTAP9-6A0A140TA67 174 aa1.98□□□□□ -2.09
KLHL28-202ENST00000396128 KMT2AQ03164 3969 aa1.98□□□□□ -2.09
KLHL28-202ENST00000396128 LCE3EQ5T5B0 92 aa1.97□□□□□ -2.09
KLHL28-202ENST00000396128 KRTAP19-6Q3LI70 58 aa1.97□□□□□ -2.09
KLHL28-202ENST00000396128 RYR3Q15413 4870 aa1.97□□□□□ -2.09
KLHL28-202ENST00000396128 STARD9Q9P2P6 4700 aa1.97□□□□□ -2.09
KLHL28-202ENST00000396128 MT1LQ93083 61 aa1.97□□□□□ -2.09
KLHL28-202ENST00000396128 RYR1P21817 5038 aa1.97□□□□□ -2.09
KLHL28-202ENST00000396128 KRTAP4-8A0A0G2JLE6 195 aa1.96□□□□□ -2.1
KLHL28-202ENST00000396128 KRTAP4-8Q9BYQ9 185 aa1.96□□□□□ -2.1
KLHL28-202ENST00000396128 MT3P25713 68 aa1.95□□□□□ -2.1
KLHL28-202ENST00000396128 KRTAP20-1Q3LI63 56 aa1.94□□□□□ -2.1
KLHL28-202ENST00000396128 RYR2Q92736 4967 aa1.93□□□□□ -2.1
KLHL28-202ENST00000396128 MT1EP04732 61 aa1.93□□□□□ -2.1
KLHL28-202ENST00000396128 MT4P47944 62 aa1.93□□□□□ -2.1
KLHL28-202ENST00000396128 VPS13BQ7Z7G8 4022 aa1.93□□□□□ -2.1
KLHL28-202ENST00000396128 MUC17Q685J3 4493 aa1.92□□□□□ -2.1
KLHL28-202ENST00000396128 DNHD1Q96M86 4753 aa1.92□□□□□ -2.1
KLHL28-202ENST00000396128 BIRC6Q9NR09 4857 aa1.92□□□□□ -2.1
KLHL28-202ENST00000396128 HECTD4Q9Y4D8 3996 aa1.92□□□□□ -2.1
KLHL28-202ENST00000396128 PKD1P98161 4303 aa1.89□□□□□ -2.11
KLHL28-202ENST00000396128 MT1MQ8N339 61 aa1.89□□□□□ -2.11
KLHL28-202ENST00000396128 SPRR5A0A1B0GTR4 108 aa1.87□□□□□ -2.11
KLHL28-202ENST00000396128 KRTAP2-3P0C7H8 128 aa1.84□□□□□ -2.11
KLHL28-202ENST00000396128 KRTAP6-3Q3LI67 103 aa1.84□□□□□ -2.11
KLHL28-202ENST00000396128 KRTAP2-4Q9BYR9 128 aa1.84□□□□□ -2.11
KLHL28-202ENST00000396128 HERC2O95714 4834 aa1.84□□□□□ -2.11
KLHL28-202ENST00000396128 KRTAP19-2Q3LHN2 52 aa1.84□□□□□ -2.12
KLHL28-202ENST00000396128 LRP2P98164 4655 aa1.83□□□□□ -2.12
KLHL28-202ENST00000396128 KRTAP9-7A8MTY7 169 aa1.83□□□□□ -2.12
KLHL28-202ENST00000396128 LCE2AQ5TA79 106 aaPredicted RBP1.83□□□□□ -2.12
KLHL28-202ENST00000396128 LCE1BQ5T7P3 118 aa1.82□□□□□ -2.12
KLHL28-202ENST00000396128 LCE1DQ5T752 114 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms