RNA–Protein interactions for RNA: ENST00000394854.7

PPP3CA-203, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP3CA, Length 4,685 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-203ENST00000394854 ALMS1Q8TCU4 4167 aa7.97□□□□□ -1.13
PPP3CA-203ENST00000394854 ANK2Q01484 3957 aa7.95□□□□□ -1.14
PPP3CA-203ENST00000394854 PLECQ15149 4684 aaKnown RBP7.92□□□□□ -1.14
PPP3CA-203ENST00000394854 DNAH1Q9P2D7 4330 aa7.87□□□□□ -1.15
PPP3CA-203ENST00000394854 DNAH11Q96DT5 4516 aa7.86□□□□□ -1.15
PPP3CA-203ENST00000394854 KRTAP4-5Q9BYR2 181 aa7.85□□□□□ -1.15
PPP3CA-203ENST00000394854 DNAH5Q8TE73 4624 aa7.82□□□□□ -1.16
PPP3CA-203ENST00000394854 CMYA5Q8N3K9 4069 aa7.74□□□□□ -1.17
PPP3CA-203ENST00000394854 DNAH3Q8TD57 4116 aa7.72□□□□□ -1.17
PPP3CA-203ENST00000394854 STARD9Q9P2P6 4700 aa7.71□□□□□ -1.18
PPP3CA-203ENST00000394854 LYSTQ99698 3801 aa7.7□□□□□ -1.18
PPP3CA-203ENST00000394854 VPS13DQ5THJ4 4388 aa7.68□□□□□ -1.18
PPP3CA-203ENST00000394854 DNAH17Q9UFH2 4485 aa7.66□□□□□ -1.18
PPP3CA-203ENST00000394854 PRKDCP78527 4128 aaKnown RBP7.61□□□□□ -1.19
PPP3CA-203ENST00000394854 LORP23490 312 aaPredicted RBP7.61□□□□□ -1.19
PPP3CA-203ENST00000394854 FAT1Q14517 4588 aa7.58□□□□□ -1.2
PPP3CA-203ENST00000394854 KMT2AQ03164 3969 aa7.55□□□□□ -1.2
PPP3CA-203ENST00000394854 LRP1BQ9NZR2 4599 aa7.55□□□□□ -1.2
PPP3CA-203ENST00000394854 DNAH8Q96JB1 4490 aa7.54□□□□□ -1.2
PPP3CA-203ENST00000394854 DNAH6Q9C0G6 4158 aa7.54□□□□□ -1.2
PPP3CA-203ENST00000394854 DNAH7Q8WXX0 4024 aa7.52□□□□□ -1.21
PPP3CA-203ENST00000394854 DNAH2Q9P225 4427 aa7.5□□□□□ -1.21
PPP3CA-203ENST00000394854 DYNC1H1Q14204 4646 aaKnown RBP7.5□□□□□ -1.21
PPP3CA-203ENST00000394854 FRAS1Q86XX4 4008 aa7.43□□□□□ -1.22
PPP3CA-203ENST00000394854 DYNC2H1Q8NCM8 4307 aaKnown RBP7.39□□□□□ -1.23
PPP3CA-203ENST00000394854 RYR1P21817 5038 aa7.39□□□□□ -1.23
PPP3CA-203ENST00000394854 KIAA1109Q2LD37 5005 aa7.35□□□□□ -1.23
PPP3CA-203ENST00000394854 HECTD4Q9Y4D8 3996 aa7.33□□□□□ -1.24
PPP3CA-203ENST00000394854 KRTAP4-1Q9BYQ7 146 aa7.31□□□□□ -1.24
PPP3CA-203ENST00000394854 KRTAP10-12P60413 245 aa7.3□□□□□ -1.24
PPP3CA-203ENST00000394854 SACSQ9NZJ4 4579 aa7.28□□□□□ -1.24
PPP3CA-203ENST00000394854 MYCBP2O75592 4640 aa7.26□□□□□ -1.25
PPP3CA-203ENST00000394854 LCE3AQ5TA76 89 aa7.24□□□□□ -1.25
PPP3CA-203ENST00000394854 VPS13BQ7Z7G8 4022 aa7.24□□□□□ -1.25
PPP3CA-203ENST00000394854 SPRR5A0A1B0GTR4 108 aa7.2□□□□□ -1.26
PPP3CA-203ENST00000394854 RYR3Q15413 4870 aa7.2□□□□□ -1.26
PPP3CA-203ENST00000394854 KRTAP12-3P60328 96 aa7.2□□□□□ -1.26
PPP3CA-203ENST00000394854 FAT2Q9NYQ8 4349 aa7.19□□□□□ -1.26
PPP3CA-203ENST00000394854 APOBP04114 4563 aaKnown RBP7.15□□□□□ -1.27
PPP3CA-203ENST00000394854 HYDINQ4G0P3 5121 aa7.13□□□□□ -1.27
PPP3CA-203ENST00000394854 LRP1Q07954 4544 aaKnown RBP7.04□□□□□ -1.28
PPP3CA-203ENST00000394854 PKHD1P08F94 4074 aa7□□□□□ -1.29
PPP3CA-203ENST00000394854 KRTAP17-1Q9BYP8 105 aa6.99□□□□□ -1.29
PPP3CA-203ENST00000394854 FAT3Q8TDW7 4589 aa6.96□□□□□ -1.29
PPP3CA-203ENST00000394854 SPRR2GQ9BYE4 73 aa6.9□□□□□ -1.31
PPP3CA-203ENST00000394854 PKD1P98161 4303 aa6.89□□□□□ -1.31
PPP3CA-203ENST00000394854 HERC2O95714 4834 aa6.89□□□□□ -1.31
PPP3CA-203ENST00000394854 MT1HP80294 61 aa6.89□□□□□ -1.31
PPP3CA-203ENST00000394854 RYR2Q92736 4967 aa6.89□□□□□ -1.31
PPP3CA-203ENST00000394854 MT2AP02795 61 aa6.86□□□□□ -1.31
PPP3CA-203ENST00000394854 CRCT1Q9UGL9 99 aa6.85□□□□□ -1.31
PPP3CA-203ENST00000394854 KMT2CQ8NEZ4 4911 aaKnown RBP6.81□□□□□ -1.32
PPP3CA-203ENST00000394854 MT1FP04733 61 aa6.78□□□□□ -1.32
PPP3CA-203ENST00000394854 LRP2P98164 4655 aa6.75□□□□□ -1.33
PPP3CA-203ENST00000394854 BIRC6Q9NR09 4857 aa6.72□□□□□ -1.33
PPP3CA-203ENST00000394854 KRTAP19-1Q8IUB9 90 aa6.62□□□□□ -1.35
PPP3CA-203ENST00000394854 KRTAP8-1Q8IUC2 63 aa6.62□□□□□ -1.35
PPP3CA-203ENST00000394854 PKHD1L1Q86WI1 4243 aa6.59□□□□□ -1.35
PPP3CA-203ENST00000394854 HSPG2P98160 4391 aa6.59□□□□□ -1.36
PPP3CA-203ENST00000394854 EPPK1P58107 5090 aaKnown RBP6.51□□□□□ -1.37
PPP3CA-203ENST00000394854 PCLOQ9Y6V0 5065 aa6.5□□□□□ -1.37
PPP3CA-203ENST00000394854 KRTAP19-5Q3LI72 72 aa6.5□□□□□ -1.37
PPP3CA-203ENST00000394854 KRTAP10-5P60370 271 aa6.45□□□□□ -1.38
PPP3CA-203ENST00000394854 KRTAP19-8Q3LI54 63 aa6.44□□□□□ -1.38
PPP3CA-203ENST00000394854 TNXBP22105 4242 aa6.44□□□□□ -1.38
PPP3CA-203ENST00000394854 KRTAP10-7P60409 375 aaPredicted RBP6.41□□□□□ -1.38
PPP3CA-203ENST00000394854 LCE3CQ5T5A8 94 aa6.4□□□□□ -1.39
PPP3CA-203ENST00000394854 LPAP08519 4548 aa6.39□□□□□ -1.39
PPP3CA-203ENST00000394854 HERC1Q15751 4861 aa6.37□□□□□ -1.39
PPP3CA-203ENST00000394854 ABCA13Q86UQ4 5058 aa6.36□□□□□ -1.39
PPP3CA-203ENST00000394854 MT1XP80297 61 aa6.35□□□□□ -1.39
PPP3CA-203ENST00000394854 LCE2CQ5TA81 110 aa6.33□□□□□ -1.4
PPP3CA-203ENST00000394854 MT1BP07438 61 aa6.31□□□□□ -1.4
PPP3CA-203ENST00000394854 KRTAP9-8Q9BYQ0 159 aa6.31□□□□□ -1.4
PPP3CA-203ENST00000394854 KRTAP19-2Q3LHN2 52 aa6.25□□□□□ -1.41
PPP3CA-203ENST00000394854 KRTAP9-6A0A140TA67 174 aa6.23□□□□□ -1.41
PPP3CA-203ENST00000394854 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
PPP3CA-203ENST00000394854 MUC17Q685J3 4493 aa6.13□□□□□ -1.43
PPP3CA-203ENST00000394854 UBR4Q5T4S7 5183 aa6.1□□□□□ -1.43
PPP3CA-203ENST00000394854 KRTAP9-3Q9BYQ3 159 aa6.1□□□□□ -1.43
PPP3CA-203ENST00000394854 FSIP2Q5CZC0 6907 aa6.09□□□□□ -1.43
PPP3CA-203ENST00000394854 KRTAP4-8A0A0G2JLE6 195 aa6.08□□□□□ -1.44
PPP3CA-203ENST00000394854 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
PPP3CA-203ENST00000394854 SPRR2FQ96RM1 72 aa6.07□□□□□ -1.44
PPP3CA-203ENST00000394854 KRTAP12-4P60329 112 aa6.04□□□□□ -1.44
PPP3CA-203ENST00000394854 FLGP20930 4061 aaPredicted RBP6□□□□□ -1.45
PPP3CA-203ENST00000394854 RNF213Q63HN8 5207 aa5.97□□□□□ -1.45
PPP3CA-203ENST00000394854 KRTAP9-2Q9BYQ4 174 aa5.96□□□□□ -1.46
PPP3CA-203ENST00000394854 FAT4Q6V0I7 4981 aa5.86□□□□□ -1.47
PPP3CA-203ENST00000394854 MUC2Q02817 5179 aa5.86□□□□□ -1.47
PPP3CA-203ENST00000394854 LCE2BO14633 110 aa5.86□□□□□ -1.47
PPP3CA-203ENST00000394854 MT1GP13640 62 aa5.85□□□□□ -1.47
PPP3CA-203ENST00000394854 KRTAP4-7Q9BYR0 210 aa5.81□□□□□ -1.48
PPP3CA-203ENST00000394854 MT3P25713 68 aa5.8□□□□□ -1.48
PPP3CA-203ENST00000394854 LCE3BQ5TA77 95 aa5.76□□□□□ -1.49
PPP3CA-203ENST00000394854 HMCN2Q8NDA2 5059 aa5.75□□□□□ -1.49
PPP3CA-203ENST00000394854 MT1LQ93083 61 aa5.68□□□□□ -1.5
PPP3CA-203ENST00000394854 LCE2AQ5TA79 106 aaPredicted RBP5.66□□□□□ -1.5
PPP3CA-203ENST00000394854 LCE2DQ5TA82 110 aaPredicted RBP5.65□□□□□ -1.5
PPP3CA-203ENST00000394854 KRTAP9-7A8MTY7 169 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms