RNA–Protein interactions for RNA: ENST00000394686.3

SGMS2-203, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 2,127 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-203ENST00000394686 SPACA4Q8TDM5 124 aa3.68□□□□□ -1.82
SGMS2-203ENST00000394686 KMT2AQ03164 3969 aa3.66□□□□□ -1.82
SGMS2-203ENST00000394686 H1FX-AS1Q4G0G2 97 aa3.66□□□□□ -1.82
SGMS2-203ENST00000394686 HYDINQ4G0P3 5121 aa3.66□□□□□ -1.82
SGMS2-203ENST00000394686 KRTAP1-5Q9BYS1 174 aa3.65□□□□□ -1.83
SGMS2-203ENST00000394686 PSORS1C2Q9UIG4 136 aa3.64□□□□□ -1.83
SGMS2-203ENST00000394686 VPS13DQ5THJ4 4388 aa3.63□□□□□ -1.83
SGMS2-203ENST00000394686 APLNQ9ULZ1 77 aa3.63□□□□□ -1.83
SGMS2-203ENST00000394686 UBE2DNLQ8IWF7 75 aa3.62□□□□□ -1.83
SGMS2-203ENST00000394686 FRAS1Q86XX4 4008 aa3.62□□□□□ -1.83
SGMS2-203ENST00000394686 C20orf166-AS1Q96NR2 134 aa3.62□□□□□ -1.83
SGMS2-203ENST00000394686 A0A087WTM6 91 aa3.61□□□□□ -1.83
SGMS2-203ENST00000394686 SPINK1P00995 79 aa3.61□□□□□ -1.83
SGMS2-203ENST00000394686 SPINT4Q6UDR6 99 aa3.61□□□□□ -1.83
SGMS2-203ENST00000394686 COX6B2Q6YFQ2 88 aa3.58□□□□□ -1.84
SGMS2-203ENST00000394686 HECTD4Q9Y4D8 3996 aa3.58□□□□□ -1.84
SGMS2-203ENST00000394686 DNAH10Q8IVF4 4471 aa3.57□□□□□ -1.84
SGMS2-203ENST00000394686 Q6ZRN7 208 aaPredicted RBP3.57□□□□□ -1.84
SGMS2-203ENST00000394686 NBDYA0A0U1RRE5 68 aa3.56□□□□□ -1.84
SGMS2-203ENST00000394686 EPPK1P58107 5090 aaKnown RBP3.56□□□□□ -1.84
SGMS2-203ENST00000394686 BIRC6Q9NR09 4857 aa3.56□□□□□ -1.84
SGMS2-203ENST00000394686 SRRM2Q9UQ35 2752 aaKnown RBP3.55□□□□□ -1.84
SGMS2-203ENST00000394686 PKHD1P08F94 4074 aa3.55□□□□□ -1.84
SGMS2-203ENST00000394686 RPL37P61927 97 aaKnown RBP3.55□□□□□ -1.84
SGMS2-203ENST00000394686 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
SGMS2-203ENST00000394686 DNAH2Q9P225 4427 aa3.54□□□□□ -1.84
SGMS2-203ENST00000394686 DNAH17Q9UFH2 4485 aa3.54□□□□□ -1.84
SGMS2-203ENST00000394686 FAT2Q9NYQ8 4349 aa3.53□□□□□ -1.84
SGMS2-203ENST00000394686 CRIPTQ9P021 101 aa3.53□□□□□ -1.84
SGMS2-203ENST00000394686 TPRXLQ17RH7 258 aa3.52□□□□□ -1.85
SGMS2-203ENST00000394686 PKD1P98161 4303 aa3.5□□□□□ -1.85
SGMS2-203ENST00000394686 A0A1B0GVY2 172 aa3.49□□□□□ -1.85
SGMS2-203ENST00000394686 KRTAP13-2Q52LG2 175 aa3.49□□□□□ -1.85
SGMS2-203ENST00000394686 DNAH11Q96DT5 4516 aa3.48□□□□□ -1.85
SGMS2-203ENST00000394686 DNAH8Q96JB1 4490 aa3.48□□□□□ -1.85
SGMS2-203ENST00000394686 RPS29P62273 56 aaKnown RBP3.47□□□□□ -1.85
SGMS2-203ENST00000394686 DYNC1H1Q14204 4646 aaKnown RBP3.47□□□□□ -1.85
SGMS2-203ENST00000394686 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
SGMS2-203ENST00000394686 DNAH5Q8TE73 4624 aa3.44□□□□□ -1.86
SGMS2-203ENST00000394686 HERC2O95714 4834 aa3.44□□□□□ -1.86
SGMS2-203ENST00000394686 LRP1BQ9NZR2 4599 aa3.43□□□□□ -1.86
SGMS2-203ENST00000394686 KIAA1109Q2LD37 5005 aa3.43□□□□□ -1.86
SGMS2-203ENST00000394686 RYR1P21817 5038 aa3.42□□□□□ -1.86
SGMS2-203ENST00000394686 FLG2Q5D862 2391 aaPredicted RBP3.42□□□□□ -1.86
SGMS2-203ENST00000394686 R4GN34 69 aa3.41□□□□□ -1.86
SGMS2-203ENST00000394686 HSPG2P98160 4391 aa3.4□□□□□ -1.86
SGMS2-203ENST00000394686 APOBP04114 4563 aaKnown RBP3.4□□□□□ -1.86
SGMS2-203ENST00000394686 KRTAP10-6P60371 365 aaPredicted RBP3.4□□□□□ -1.86
SGMS2-203ENST00000394686 KRTAP1-4P0C5Y4 121 aa3.4□□□□□ -1.87
SGMS2-203ENST00000394686 C10orf95Q9H7T3 257 aa3.39□□□□□ -1.87
SGMS2-203ENST00000394686 S4R3F8 94 aa3.38□□□□□ -1.87
SGMS2-203ENST00000394686 PCLOQ9Y6V0 5065 aa3.36□□□□□ -1.87
SGMS2-203ENST00000394686 KRTAP13-4Q3LI77 160 aa3.36□□□□□ -1.87
SGMS2-203ENST00000394686 A0A0D9SG42 100 aa3.35□□□□□ -1.87
SGMS2-203ENST00000394686 VPS13BQ7Z7G8 4022 aa3.34□□□□□ -1.87
SGMS2-203ENST00000394686 KRTAP10-1P60331 282 aa3.34□□□□□ -1.88
SGMS2-203ENST00000394686 ABCA13Q86UQ4 5058 aa3.33□□□□□ -1.88
SGMS2-203ENST00000394686 Q5VSD8 79 aa3.32□□□□□ -1.88
SGMS2-203ENST00000394686 FAT1Q14517 4588 aa3.3□□□□□ -1.88
SGMS2-203ENST00000394686 DMBT1Q9UGM3 2413 aaPredicted RBP3.3□□□□□ -1.88
SGMS2-203ENST00000394686 KRTAP12-1P59990 96 aa3.29□□□□□ -1.88
SGMS2-203ENST00000394686 KRTAP12-2P59991 146 aa3.29□□□□□ -1.88
SGMS2-203ENST00000394686 MT3P25713 68 aa3.29□□□□□ -1.88
SGMS2-203ENST00000394686 M0QZ58 72 aa3.28□□□□□ -1.88
SGMS2-203ENST00000394686 PLAC4Q8WY50 150 aa3.28□□□□□ -1.88
SGMS2-203ENST00000394686 C9orf92A6NGG3 77 aa3.27□□□□□ -1.89
SGMS2-203ENST00000394686 SMR3BP02814 79 aaPredicted RBP3.27□□□□□ -1.89
SGMS2-203ENST00000394686 MYCBP2O75592 4640 aa3.27□□□□□ -1.89
SGMS2-203ENST00000394686 PKHD1L1Q86WI1 4243 aa3.26□□□□□ -1.89
SGMS2-203ENST00000394686 LCE3CQ5T5A8 94 aa3.23□□□□□ -1.89
SGMS2-203ENST00000394686 KRTAP2-2Q9BYT5 123 aa3.22□□□□□ -1.89
SGMS2-203ENST00000394686 FAT3Q8TDW7 4589 aa3.21□□□□□ -1.9
SGMS2-203ENST00000394686 KRTAP10-4P60372 401 aaPredicted RBP3.2□□□□□ -1.9
SGMS2-203ENST00000394686 HERC1Q15751 4861 aa3.2□□□□□ -1.9
SGMS2-203ENST00000394686 PP632Q6XCG6 107 aa3.2□□□□□ -1.9
SGMS2-203ENST00000394686 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
SGMS2-203ENST00000394686 LRP1Q07954 4544 aaKnown RBP3.18□□□□□ -1.9
SGMS2-203ENST00000394686 TNXBP22105 4242 aa3.14□□□□□ -1.91
SGMS2-203ENST00000394686 PRO2289Q9P1D8 64 aa3.11□□□□□ -1.91
SGMS2-203ENST00000394686 MT1HL1P0DM35 61 aa3.1□□□□□ -1.91
SGMS2-203ENST00000394686 KRTAP10-12P60413 245 aa3.1□□□□□ -1.91
SGMS2-203ENST00000394686 HMCN2Q8NDA2 5059 aa3.09□□□□□ -1.91
SGMS2-203ENST00000394686 KRTAP10-8P60410 259 aa3.08□□□□□ -1.92
SGMS2-203ENST00000394686 SPRR5A0A1B0GTR4 108 aa3.05□□□□□ -1.92
SGMS2-203ENST00000394686 LRP2P98164 4655 aa3.03□□□□□ -1.92
SGMS2-203ENST00000394686 INE1O15225 51 aa3.01□□□□□ -1.93
SGMS2-203ENST00000394686 UBR4Q5T4S7 5183 aa3□□□□□ -1.93
SGMS2-203ENST00000394686 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
SGMS2-203ENST00000394686 LPAP08519 4548 aa2.94□□□□□ -1.94
SGMS2-203ENST00000394686 RNF213Q63HN8 5207 aa2.91□□□□□ -1.94
SGMS2-203ENST00000394686 TNP1P09430 55 aa2.91□□□□□ -1.94
SGMS2-203ENST00000394686 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
SGMS2-203ENST00000394686 MUC17Q685J3 4493 aa2.86□□□□□ -1.95
SGMS2-203ENST00000394686 MUC2Q02817 5179 aa2.84□□□□□ -1.96
SGMS2-203ENST00000394686 KRTAP10-7P60409 375 aaPredicted RBP2.84□□□□□ -1.96
SGMS2-203ENST00000394686 FAT4Q6V0I7 4981 aa2.79□□□□□ -1.96
SGMS2-203ENST00000394686 KRTAP5-9P26371 169 aa2.78□□□□□ -1.96
SGMS2-203ENST00000394686 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
SGMS2-203ENST00000394686 KRTAP10-5P60370 271 aa2.69□□□□□ -1.98
SGMS2-203ENST00000394686 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms