RNA–Protein interactions for RNA: ENST00000393359.6

TGFBRAP1-202, Transcript of transforming growth factor beta receptor associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBRAP1, Length 5,979 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBRAP1-202ENST00000393359 MUC3AQ02505 3323 aa9.39□□□□□ -0.91
TGFBRAP1-202ENST00000393359 VPS13CQ709C8 3753 aa9.31□□□□□ -0.92
TGFBRAP1-202ENST00000393359 CSMD3Q7Z407 3707 aa9.23□□□□□ -0.93
TGFBRAP1-202ENST00000393359 BSNQ9UPA5 3926 aa9.19□□□□□ -0.94
TGFBRAP1-202ENST00000393359 KRTAP4-1Q9BYQ7 146 aa9.08□□□□□ -0.96
TGFBRAP1-202ENST00000393359 AKAP9Q99996 3911 aa9.03□□□□□ -0.96
TGFBRAP1-202ENST00000393359 MT1HP80294 61 aa8.98□□□□□ -0.97
TGFBRAP1-202ENST00000393359 DNAH9Q9NYC9 4486 aa8.98□□□□□ -0.97
TGFBRAP1-202ENST00000393359 DNAH1Q9P2D7 4330 aa8.97□□□□□ -0.97
TGFBRAP1-202ENST00000393359 DNAH10Q8IVF4 4471 aa8.91□□□□□ -0.98
TGFBRAP1-202ENST00000393359 DNAH5Q8TE73 4624 aa8.91□□□□□ -0.98
TGFBRAP1-202ENST00000393359 DNAH2Q9P225 4427 aa8.89□□□□□ -0.99
TGFBRAP1-202ENST00000393359 KRTAP19-5Q3LI72 72 aa8.86□□□□□ -0.99
TGFBRAP1-202ENST00000393359 MT2AP02795 61 aa8.84□□□□□ -0.99
TGFBRAP1-202ENST00000393359 SPRR2GQ9BYE4 73 aa8.74□□□□□ -1.01
TGFBRAP1-202ENST00000393359 DNAH11Q96DT5 4516 aa8.74□□□□□ -1.01
TGFBRAP1-202ENST00000393359 SPRR2FQ96RM1 72 aa8.73□□□□□ -1.01
TGFBRAP1-202ENST00000393359 LCE3CQ5T5A8 94 aa8.72□□□□□ -1.01
TGFBRAP1-202ENST00000393359 KRTAP10-7P60409 375 aaPredicted RBP8.7□□□□□ -1.02
TGFBRAP1-202ENST00000393359 MT1FP04733 61 aa8.69□□□□□ -1.02
TGFBRAP1-202ENST00000393359 DNAH8Q96JB1 4490 aa8.66□□□□□ -1.02
TGFBRAP1-202ENST00000393359 PLECQ15149 4684 aaKnown RBP8.65□□□□□ -1.02
TGFBRAP1-202ENST00000393359 DNAH17Q9UFH2 4485 aa8.59□□□□□ -1.03
TGFBRAP1-202ENST00000393359 DNAH3Q8TD57 4116 aa8.55□□□□□ -1.04
TGFBRAP1-202ENST00000393359 ZNF469Q96JG9 3925 aaPredicted RBP8.46□□□□□ -1.06
TGFBRAP1-202ENST00000393359 VPS13DQ5THJ4 4388 aa8.45□□□□□ -1.06
TGFBRAP1-202ENST00000393359 FAT1Q14517 4588 aa8.44□□□□□ -1.06
TGFBRAP1-202ENST00000393359 ANK2Q01484 3957 aa8.39□□□□□ -1.07
TGFBRAP1-202ENST00000393359 FAT2Q9NYQ8 4349 aa8.39□□□□□ -1.07
TGFBRAP1-202ENST00000393359 LRP1BQ9NZR2 4599 aa8.36□□□□□ -1.07
TGFBRAP1-202ENST00000393359 SACSQ9NZJ4 4579 aa8.35□□□□□ -1.07
TGFBRAP1-202ENST00000393359 LCE3BQ5TA77 95 aa8.33□□□□□ -1.08
TGFBRAP1-202ENST00000393359 DYNC1H1Q14204 4646 aaKnown RBP8.31□□□□□ -1.08
TGFBRAP1-202ENST00000393359 DYNC2H1Q8NCM8 4307 aaKnown RBP8.27□□□□□ -1.08
TGFBRAP1-202ENST00000393359 STARD9Q9P2P6 4700 aa8.24□□□□□ -1.09
TGFBRAP1-202ENST00000393359 SPRR2EP22531 72 aa8.2□□□□□ -1.1
TGFBRAP1-202ENST00000393359 SPRR2BP35325 72 aa8.2□□□□□ -1.1
TGFBRAP1-202ENST00000393359 SPRR2AP35326 72 aa8.2□□□□□ -1.1
TGFBRAP1-202ENST00000393359 MT1GP13640 62 aa8.15□□□□□ -1.1
TGFBRAP1-202ENST00000393359 VPS13BQ7Z7G8 4022 aa8.11□□□□□ -1.11
TGFBRAP1-202ENST00000393359 FRAS1Q86XX4 4008 aa8.11□□□□□ -1.11
TGFBRAP1-202ENST00000393359 APOBP04114 4563 aaKnown RBP8.11□□□□□ -1.11
TGFBRAP1-202ENST00000393359 KRTAP12-4P60329 112 aa8.07□□□□□ -1.12
TGFBRAP1-202ENST00000393359 CMYA5Q8N3K9 4069 aa8.07□□□□□ -1.12
TGFBRAP1-202ENST00000393359 PRKDCP78527 4128 aaKnown RBP8.05□□□□□ -1.12
TGFBRAP1-202ENST00000393359 KMT2AQ03164 3969 aa8.03□□□□□ -1.12
TGFBRAP1-202ENST00000393359 DNAH7Q8WXX0 4024 aa8.03□□□□□ -1.12
TGFBRAP1-202ENST00000393359 KRTAP19-1Q8IUB9 90 aa8.02□□□□□ -1.13
TGFBRAP1-202ENST00000393359 RYR1P21817 5038 aa8.01□□□□□ -1.13
TGFBRAP1-202ENST00000393359 MT1XP80297 61 aa8.01□□□□□ -1.13
TGFBRAP1-202ENST00000393359 KRTAP19-4Q3LI73 84 aa7.99□□□□□ -1.13
TGFBRAP1-202ENST00000393359 DNAH6Q9C0G6 4158 aa7.98□□□□□ -1.13
TGFBRAP1-202ENST00000393359 KRTAP19-8Q3LI54 63 aa7.97□□□□□ -1.13
TGFBRAP1-202ENST00000393359 SPRR2DP22532 72 aa7.91□□□□□ -1.14
TGFBRAP1-202ENST00000393359 KRTAP4-8A0A0G2JLE6 195 aa7.88□□□□□ -1.15
TGFBRAP1-202ENST00000393359 KRTAP4-8Q9BYQ9 185 aa7.88□□□□□ -1.15
TGFBRAP1-202ENST00000393359 DNHD1Q96M86 4753 aa7.87□□□□□ -1.15
TGFBRAP1-202ENST00000393359 LCE2BO14633 110 aa7.82□□□□□ -1.16
TGFBRAP1-202ENST00000393359 MT1BP07438 61 aa7.8□□□□□ -1.16
TGFBRAP1-202ENST00000393359 KRTAP17-1Q9BYP8 105 aa7.79□□□□□ -1.16
TGFBRAP1-202ENST00000393359 FAT3Q8TDW7 4589 aa7.79□□□□□ -1.16
TGFBRAP1-202ENST00000393359 LYSTQ99698 3801 aa7.78□□□□□ -1.16
TGFBRAP1-202ENST00000393359 LCE3DQ9BYE3 92 aa7.73□□□□□ -1.17
TGFBRAP1-202ENST00000393359 RYR3Q15413 4870 aa7.7□□□□□ -1.18
TGFBRAP1-202ENST00000393359 LRP1Q07954 4544 aaKnown RBP7.69□□□□□ -1.18
TGFBRAP1-202ENST00000393359 KRTAP9-8Q9BYQ0 159 aa7.65□□□□□ -1.19
TGFBRAP1-202ENST00000393359 SPRR5A0A1B0GTR4 108 aa7.63□□□□□ -1.19
TGFBRAP1-202ENST00000393359 LCE3EQ5T5B0 92 aa7.58□□□□□ -1.2
TGFBRAP1-202ENST00000393359 HECTD4Q9Y4D8 3996 aa7.57□□□□□ -1.2
TGFBRAP1-202ENST00000393359 MYCBP2O75592 4640 aa7.57□□□□□ -1.2
TGFBRAP1-202ENST00000393359 KRTAP4-7Q9BYR0 210 aa7.56□□□□□ -1.2
TGFBRAP1-202ENST00000393359 KRTAP9-3Q9BYQ3 159 aa7.49□□□□□ -1.21
TGFBRAP1-202ENST00000393359 HERC1Q15751 4861 aa7.37□□□□□ -1.23
TGFBRAP1-202ENST00000393359 LCE2CQ5TA81 110 aa7.37□□□□□ -1.23
TGFBRAP1-202ENST00000393359 KRTAP19-3Q7Z4W3 81 aa7.34□□□□□ -1.23
TGFBRAP1-202ENST00000393359 MT1LQ93083 61 aa7.31□□□□□ -1.24
TGFBRAP1-202ENST00000393359 LPAP08519 4548 aa7.29□□□□□ -1.24
TGFBRAP1-202ENST00000393359 HSPG2P98160 4391 aa7.27□□□□□ -1.25
TGFBRAP1-202ENST00000393359 PKD1P98161 4303 aa7.25□□□□□ -1.25
TGFBRAP1-202ENST00000393359 LCE2DQ5TA82 110 aaPredicted RBP7.23□□□□□ -1.25
TGFBRAP1-202ENST00000393359 PRM1P04553 51 aa7.22□□□□□ -1.25
TGFBRAP1-202ENST00000393359 RYR2Q92736 4967 aa7.21□□□□□ -1.26
TGFBRAP1-202ENST00000393359 MT1EP04732 61 aa7.2□□□□□ -1.26
TGFBRAP1-202ENST00000393359 PKHD1L1Q86WI1 4243 aa7.19□□□□□ -1.26
TGFBRAP1-202ENST00000393359 LOC100996750A0A140TA64 210 aa7.19□□□□□ -1.26
TGFBRAP1-202ENST00000393359 MT4P47944 62 aa7.13□□□□□ -1.27
TGFBRAP1-202ENST00000393359 KRTAP4-3Q9BYR4 195 aa7.04□□□□□ -1.28
TGFBRAP1-202ENST00000393359 MT1MQ8N339 61 aa7.02□□□□□ -1.28
TGFBRAP1-202ENST00000393359 MT3P25713 68 aa6.99□□□□□ -1.29
TGFBRAP1-202ENST00000393359 KIAA1109Q2LD37 5005 aa6.98□□□□□ -1.29
TGFBRAP1-202ENST00000393359 LRP2P98164 4655 aa6.97□□□□□ -1.29
TGFBRAP1-202ENST00000393359 LCE1BQ5T7P3 118 aa6.97□□□□□ -1.29
TGFBRAP1-202ENST00000393359 TNXBP22105 4242 aa6.94□□□□□ -1.3
TGFBRAP1-202ENST00000393359 HYDINQ4G0P3 5121 aa6.93□□□□□ -1.3
TGFBRAP1-202ENST00000393359 PKHD1P08F94 4074 aa6.91□□□□□ -1.3
TGFBRAP1-202ENST00000393359 HERC2O95714 4834 aa6.9□□□□□ -1.3
TGFBRAP1-202ENST00000393359 LCE1DQ5T752 114 aa6.9□□□□□ -1.31
TGFBRAP1-202ENST00000393359 KRTAP19-2Q3LHN2 52 aa6.86□□□□□ -1.31
TGFBRAP1-202ENST00000393359 KMT2CQ8NEZ4 4911 aaKnown RBP6.78□□□□□ -1.32
TGFBRAP1-202ENST00000393359 KRTAP4-9Q9BYQ8 210 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms