RNA–Protein interactions for RNA: ENST00000392396.7

TFRC-202, Transcript of transferrin receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TFRC, Length 5,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-202ENST00000392396 DNAH1Q9P2D7 4330 aa7.69□□□□□ -1.18
TFRC-202ENST00000392396 LORP23490 312 aaPredicted RBP7.69□□□□□ -1.18
TFRC-202ENST00000392396 MT1HP80294 61 aa7.68□□□□□ -1.18
TFRC-202ENST00000392396 DNAH9Q9NYC9 4486 aa7.67□□□□□ -1.18
TFRC-202ENST00000392396 DNAH10Q8IVF4 4471 aa7.58□□□□□ -1.2
TFRC-202ENST00000392396 VPS13CQ709C8 3753 aa7.56□□□□□ -1.2
TFRC-202ENST00000392396 KRTAP23-1A1A580 65 aa7.56□□□□□ -1.2
TFRC-202ENST00000392396 KRTAP4-1Q9BYQ7 146 aa7.54□□□□□ -1.2
TFRC-202ENST00000392396 BSNQ9UPA5 3926 aa7.51□□□□□ -1.21
TFRC-202ENST00000392396 MT2AP02795 61 aa7.5□□□□□ -1.21
TFRC-202ENST00000392396 LCE3AQ5TA76 89 aa7.48□□□□□ -1.21
TFRC-202ENST00000392396 RYR1P21817 5038 aa7.37□□□□□ -1.23
TFRC-202ENST00000392396 DYNC1H1Q14204 4646 aaKnown RBP7.34□□□□□ -1.23
TFRC-202ENST00000392396 SPRR2GQ9BYE4 73 aa7.3□□□□□ -1.24
TFRC-202ENST00000392396 SPRR2FQ96RM1 72 aa7.3□□□□□ -1.24
TFRC-202ENST00000392396 MT1FP04733 61 aa7.27□□□□□ -1.24
TFRC-202ENST00000392396 AKAP9Q99996 3911 aa7.25□□□□□ -1.25
TFRC-202ENST00000392396 DNAH2Q9P225 4427 aa7.24□□□□□ -1.25
TFRC-202ENST00000392396 VPS13DQ5THJ4 4388 aa7.21□□□□□ -1.26
TFRC-202ENST00000392396 LRP1BQ9NZR2 4599 aa7.17□□□□□ -1.26
TFRC-202ENST00000392396 KRTAP10-7P60409 375 aaPredicted RBP7.17□□□□□ -1.26
TFRC-202ENST00000392396 FAT1Q14517 4588 aa7.13□□□□□ -1.27
TFRC-202ENST00000392396 INE1O15225 51 aa7.12□□□□□ -1.27
TFRC-202ENST00000392396 DNAH17Q9UFH2 4485 aa7.11□□□□□ -1.27
TFRC-202ENST00000392396 SACSQ9NZJ4 4579 aa7.1□□□□□ -1.27
TFRC-202ENST00000392396 FAT2Q9NYQ8 4349 aa7.09□□□□□ -1.27
TFRC-202ENST00000392396 RYR3Q15413 4870 aa7.05□□□□□ -1.28
TFRC-202ENST00000392396 KRTAP10-5P60370 271 aa7.05□□□□□ -1.28
TFRC-202ENST00000392396 KIAA1109Q2LD37 5005 aa6.99□□□□□ -1.29
TFRC-202ENST00000392396 ZNF469Q96JG9 3925 aaPredicted RBP6.99□□□□□ -1.29
TFRC-202ENST00000392396 DYNC2H1Q8NCM8 4307 aaKnown RBP6.99□□□□□ -1.29
TFRC-202ENST00000392396 BIRC6Q9NR09 4857 aa6.99□□□□□ -1.29
TFRC-202ENST00000392396 KRTAP17-1Q9BYP8 105 aa6.96□□□□□ -1.3
TFRC-202ENST00000392396 SPRR2EP22531 72 aa6.95□□□□□ -1.3
TFRC-202ENST00000392396 SPRR2BP35325 72 aa6.95□□□□□ -1.3
TFRC-202ENST00000392396 SPRR2AP35326 72 aa6.95□□□□□ -1.3
TFRC-202ENST00000392396 KRTAP19-4Q3LI73 84 aa6.95□□□□□ -1.3
TFRC-202ENST00000392396 STARD9Q9P2P6 4700 aa6.94□□□□□ -1.3
TFRC-202ENST00000392396 CSMD3Q7Z407 3707 aa6.91□□□□□ -1.3
TFRC-202ENST00000392396 PRKDCP78527 4128 aaKnown RBP6.88□□□□□ -1.31
TFRC-202ENST00000392396 KRTAP19-8Q3LI54 63 aa6.86□□□□□ -1.31
TFRC-202ENST00000392396 KRTAP19-5Q3LI72 72 aa6.86□□□□□ -1.31
TFRC-202ENST00000392396 RYR2Q92736 4967 aa6.86□□□□□ -1.31
TFRC-202ENST00000392396 ANK2Q01484 3957 aa6.81□□□□□ -1.32
TFRC-202ENST00000392396 HERC1Q15751 4861 aa6.79□□□□□ -1.32
TFRC-202ENST00000392396 APOBP04114 4563 aaKnown RBP6.78□□□□□ -1.32
TFRC-202ENST00000392396 SPRR2DP22532 72 aa6.76□□□□□ -1.33
TFRC-202ENST00000392396 HERC2O95714 4834 aa6.75□□□□□ -1.33
TFRC-202ENST00000392396 DNAH8Q96JB1 4490 aa6.74□□□□□ -1.33
TFRC-202ENST00000392396 FAT3Q8TDW7 4589 aa6.74□□□□□ -1.33
TFRC-202ENST00000392396 KRTAP19-1Q8IUB9 90 aa6.71□□□□□ -1.34
TFRC-202ENST00000392396 LRP1Q07954 4544 aaKnown RBP6.7□□□□□ -1.34
TFRC-202ENST00000392396 LCE2BO14633 110 aa6.67□□□□□ -1.34
TFRC-202ENST00000392396 PCLOQ9Y6V0 5065 aa6.66□□□□□ -1.34
TFRC-202ENST00000392396 DNAH3Q8TD57 4116 aa6.65□□□□□ -1.34
TFRC-202ENST00000392396 KRTAP9-8Q9BYQ0 159 aa6.65□□□□□ -1.34
TFRC-202ENST00000392396 LCE3CQ5T5A8 94 aa6.65□□□□□ -1.34
TFRC-202ENST00000392396 VPS13BQ7Z7G8 4022 aa6.62□□□□□ -1.35
TFRC-202ENST00000392396 DNAH6Q9C0G6 4158 aa6.6□□□□□ -1.35
TFRC-202ENST00000392396 MT1BP07438 61 aa6.55□□□□□ -1.36
TFRC-202ENST00000392396 KRTAP9-3Q9BYQ3 159 aa6.55□□□□□ -1.36
TFRC-202ENST00000392396 LCE2CQ5TA81 110 aa6.54□□□□□ -1.36
TFRC-202ENST00000392396 KRTAP12-4P60329 112 aa6.53□□□□□ -1.36
TFRC-202ENST00000392396 MT1XP80297 61 aa6.51□□□□□ -1.37
TFRC-202ENST00000392396 KRTAP9-2Q9BYQ4 174 aa6.49□□□□□ -1.37
TFRC-202ENST00000392396 HSPG2P98160 4391 aa6.47□□□□□ -1.37
TFRC-202ENST00000392396 MT1GP13640 62 aa6.46□□□□□ -1.38
TFRC-202ENST00000392396 PKD1P98161 4303 aa6.44□□□□□ -1.38
TFRC-202ENST00000392396 KMT2AQ03164 3969 aa6.43□□□□□ -1.38
TFRC-202ENST00000392396 PKHD1L1Q86WI1 4243 aa6.41□□□□□ -1.38
TFRC-202ENST00000392396 EPPK1P58107 5090 aaKnown RBP6.4□□□□□ -1.38
TFRC-202ENST00000392396 MYCBP2O75592 4640 aa6.39□□□□□ -1.39
TFRC-202ENST00000392396 LYSTQ99698 3801 aa6.39□□□□□ -1.39
TFRC-202ENST00000392396 DNAH7Q8WXX0 4024 aa6.37□□□□□ -1.39
TFRC-202ENST00000392396 KRTAP9-6A0A140TA67 174 aa6.32□□□□□ -1.4
TFRC-202ENST00000392396 LCE2DQ5TA82 110 aaPredicted RBP6.28□□□□□ -1.4
TFRC-202ENST00000392396 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
TFRC-202ENST00000392396 KRTAP4-8Q9BYQ9 185 aa6.25□□□□□ -1.41
TFRC-202ENST00000392396 FRAS1Q86XX4 4008 aa6.23□□□□□ -1.41
TFRC-202ENST00000392396 HYDINQ4G0P3 5121 aa6.2□□□□□ -1.42
TFRC-202ENST00000392396 KRTAP19-6Q3LI70 58 aa6.19□□□□□ -1.42
TFRC-202ENST00000392396 LCE3BQ5TA77 95 aa6.19□□□□□ -1.42
TFRC-202ENST00000392396 KRTAP19-3Q7Z4W3 81 aa6.19□□□□□ -1.42
TFRC-202ENST00000392396 KRTAP19-2Q3LHN2 52 aa6.14□□□□□ -1.43
TFRC-202ENST00000392396 CMYA5Q8N3K9 4069 aa6.14□□□□□ -1.43
TFRC-202ENST00000392396 LRP2P98164 4655 aa6.12□□□□□ -1.43
TFRC-202ENST00000392396 ABCA13Q86UQ4 5058 aa6.1□□□□□ -1.43
TFRC-202ENST00000392396 LCE2AQ5TA79 106 aaPredicted RBP6.07□□□□□ -1.44
TFRC-202ENST00000392396 KMT2CQ8NEZ4 4911 aaKnown RBP5.98□□□□□ -1.45
TFRC-202ENST00000392396 UBR4Q5T4S7 5183 aa5.96□□□□□ -1.46
TFRC-202ENST00000392396 MT1EP04732 61 aa5.95□□□□□ -1.46
TFRC-202ENST00000392396 PKHD1P08F94 4074 aa5.95□□□□□ -1.46
TFRC-202ENST00000392396 MT1LQ93083 61 aa5.93□□□□□ -1.46
TFRC-202ENST00000392396 HECTD4Q9Y4D8 3996 aa5.93□□□□□ -1.46
TFRC-202ENST00000392396 KRTAP9-7A8MTY7 169 aa5.9□□□□□ -1.47
TFRC-202ENST00000392396 MT4P47944 62 aa5.88□□□□□ -1.47
TFRC-202ENST00000392396 KRTAP20-1Q3LI63 56 aa5.88□□□□□ -1.47
TFRC-202ENST00000392396 LCE3DQ9BYE3 92 aa5.84□□□□□ -1.47
TFRC-202ENST00000392396 MT1MQ8N339 61 aa5.81□□□□□ -1.48
TFRC-202ENST00000392396 MUC17Q685J3 4493 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms