RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 LRRK2Q5S007 2527 aa-0.05□□□□□ -2.42
TRAJ39-201ENST00000390498 UTP20O75691 2785 aaKnown RBP-0.05□□□□□ -2.42
TRAJ39-201ENST00000390498 KALRNO60229 2985 aa-0.05□□□□□ -2.42
TRAJ39-201ENST00000390498 NBEAQ8NFP9 2946 aa-0.05□□□□□ -2.42
TRAJ39-201ENST00000390498 ACACAQ13085 2346 aa-0.05□□□□□ -2.42
TRAJ39-201ENST00000390498 NBPF19A0A087WUL8 3843 aa-0.05□□□□□ -2.42
TRAJ39-201ENST00000390498 KRTAP19-5Q3LI72 72 aa-0.05□□□□□ -2.42
TRAJ39-201ENST00000390498 DNAH1Q9P2D7 4330 aa-0.05□□□□□ -2.42
TRAJ39-201ENST00000390498 FASNP49327 2511 aaKnown RBP-0.05□□□□□ -2.42
TRAJ39-201ENST00000390498 NBEAL2Q6ZNJ1 2754 aa-0.05□□□□□ -2.42
TRAJ39-201ENST00000390498 DNAH7Q8WXX0 4024 aa-0.05□□□□□ -2.42
TRAJ39-201ENST00000390498 EPG5Q9HCE0 2579 aa-0.05□□□□□ -2.42
TRAJ39-201ENST00000390498 MUC12Q9UKN1 5478 aa-0.06□□□□□ -2.42
TRAJ39-201ENST00000390498 FAM186AA6NE01 2351 aa-0.06□□□□□ -2.42
TRAJ39-201ENST00000390498 SPART-AS1P0CW21 52 aa-0.06□□□□□ -2.42
TRAJ39-201ENST00000390498 TRIOO75962 3097 aa-0.06□□□□□ -2.42
TRAJ39-201ENST00000390498 SPENQ96T58 3664 aaKnown RBP-0.06□□□□□ -2.42
TRAJ39-201ENST00000390498 COL6A5A8TX70 2615 aa-0.06□□□□□ -2.42
TRAJ39-201ENST00000390498 MXRA5Q9NR99 2828 aa-0.06□□□□□ -2.42
TRAJ39-201ENST00000390498 MYO18BQ8IUG5 2567 aa-0.07□□□□□ -2.42
TRAJ39-201ENST00000390498 SMR3BP02814 79 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ39-201ENST00000390498 HERC1Q15751 4861 aa-0.07□□□□□ -2.42
TRAJ39-201ENST00000390498 DNAH8Q96JB1 4490 aa-0.07□□□□□ -2.42
TRAJ39-201ENST00000390498 LAMA1P25391 3075 aa-0.07□□□□□ -2.42
TRAJ39-201ENST00000390498 UBR4Q5T4S7 5183 aa-0.08□□□□□ -2.42
TRAJ39-201ENST00000390498 DEFB1P60022 68 aa-0.08□□□□□ -2.42
TRAJ39-201ENST00000390498 MGAM2Q2M2H8 2515 aa-0.08□□□□□ -2.42
TRAJ39-201ENST00000390498 RIF1Q5UIP0 2472 aaKnown RBP-0.08□□□□□ -2.42
TRAJ39-201ENST00000390498 KMT2CQ8NEZ4 4911 aaKnown RBP-0.08□□□□□ -2.42
TRAJ39-201ENST00000390498 FAT1Q14517 4588 aa-0.08□□□□□ -2.42
TRAJ39-201ENST00000390498 WDR87Q6ZQQ6 2873 aa-0.08□□□□□ -2.42
TRAJ39-201ENST00000390498 COL12A1Q99715 3063 aa-0.1□□□□□ -2.43
TRAJ39-201ENST00000390498 CELSR3Q9NYQ7 3312 aa-0.1□□□□□ -2.43
TRAJ39-201ENST00000390498 MT1HP80294 61 aa-0.1□□□□□ -2.43
TRAJ39-201ENST00000390498 KRTAP19-8Q3LI54 63 aa-0.1□□□□□ -2.43
TRAJ39-201ENST00000390498 MROH2BQ7Z745 1585 aa-0.11□□□□□ -2.43
TRAJ39-201ENST00000390498 TLN2Q9Y4G6 2542 aa-0.11□□□□□ -2.43
TRAJ39-201ENST00000390498 USH2AO75445 5202 aa-0.11□□□□□ -2.43
TRAJ39-201ENST00000390498 ITPR1Q14643 2758 aa-0.11□□□□□ -2.43
TRAJ39-201ENST00000390498 DUOX1Q9NRD9 1551 aa-0.11□□□□□ -2.43
TRAJ39-201ENST00000390498 MUC17Q685J3 4493 aa-0.12□□□□□ -2.43
TRAJ39-201ENST00000390498 CMYA5Q8N3K9 4069 aa-0.12□□□□□ -2.43
TRAJ39-201ENST00000390498 FRYQ5TBA9 3013 aa-0.12□□□□□ -2.43
TRAJ39-201ENST00000390498 CCDC168Q8NDH2 2452 aa-0.12□□□□□ -2.43
TRAJ39-201ENST00000390498 SPTBN5Q9NRC6 3674 aaKnown RBP-0.12□□□□□ -2.43
TRAJ39-201ENST00000390498 STARD9Q9P2P6 4700 aa-0.13□□□□□ -2.43
TRAJ39-201ENST00000390498 RYR1P21817 5038 aa-0.13□□□□□ -2.43
TRAJ39-201ENST00000390498 USP9YO00507 2555 aaPredicted RBP-0.13□□□□□ -2.43
TRAJ39-201ENST00000390498 RPL39P62891 51 aaKnown RBP-0.13□□□□□ -2.43
TRAJ39-201ENST00000390498 DSTQ03001 7570 aaKnown RBP-0.13□□□□□ -2.43
TRAJ39-201ENST00000390498 USP9XQ93008 2570 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ39-201ENST00000390498 TOMM7Q9P0U1 55 aa-0.14□□□□□ -2.43
TRAJ39-201ENST00000390498 CHD7Q9P2D1 2997 aa-0.14□□□□□ -2.43
TRAJ39-201ENST00000390498 ITPR3Q14573 2671 aa-0.14□□□□□ -2.43
TRAJ39-201ENST00000390498 GCC2Q8IWJ2 1684 aa-0.14□□□□□ -2.43
TRAJ39-201ENST00000390498 DNAH10Q8IVF4 4471 aa-0.15□□□□□ -2.43
TRAJ39-201ENST00000390498 MT1EP04732 61 aa-0.15□□□□□ -2.43
TRAJ39-201ENST00000390498 SNRPGP62308 76 aaKnown RBP-0.15□□□□□ -2.43
TRAJ39-201ENST00000390498 PLECQ15149 4684 aaKnown RBP-0.15□□□□□ -2.43
TRAJ39-201ENST00000390498 LEAP2Q969E1 77 aa-0.15□□□□□ -2.43
TRAJ39-201ENST00000390498 EPPK1P58107 5090 aaKnown RBP-0.16□□□□□ -2.44
TRAJ39-201ENST00000390498 RELNP78509 3460 aa-0.17□□□□□ -2.44
TRAJ39-201ENST00000390498 RPL39LQ96EH5 51 aaKnown RBP-0.17□□□□□ -2.44
TRAJ39-201ENST00000390498 C5orf42Q9H799 3197 aa-0.17□□□□□ -2.44
TRAJ39-201ENST00000390498 CRYBG3Q68DQ2 2970 aa-0.18□□□□□ -2.44
TRAJ39-201ENST00000390498 DYNC1H1Q14204 4646 aaKnown RBP-0.18□□□□□ -2.44
TRAJ39-201ENST00000390498 MGAQ8IWI9 3026 aa-0.18□□□□□ -2.44
TRAJ39-201ENST00000390498 MT1XP80297 61 aa-0.18□□□□□ -2.44
TRAJ39-201ENST00000390498 LINC01590Q5TEZ4 76 aa-0.18□□□□□ -2.44
TRAJ39-201ENST00000390498 MT1LQ93083 61 aa-0.18□□□□□ -2.44
TRAJ39-201ENST00000390498 DNAH17Q9UFH2 4485 aa-0.18□□□□□ -2.44
TRAJ39-201ENST00000390498 ZFHX4Q86UP3 3567 aa-0.19□□□□□ -2.44
TRAJ39-201ENST00000390498 CSMD1Q96PZ7 3565 aa-0.19□□□□□ -2.44
TRAJ39-201ENST00000390498 MT4P47944 62 aa-0.19□□□□□ -2.44
TRAJ39-201ENST00000390498 DEFB136Q30KP8 78 aa-0.19□□□□□ -2.44
TRAJ39-201ENST00000390498 DNHD1Q96M86 4753 aa-0.2□□□□□ -2.44
TRAJ39-201ENST00000390498 ADGRG4Q8IZF6 3080 aa-0.2□□□□□ -2.44
TRAJ39-201ENST00000390498 LAMA3Q16787 3333 aa-0.2□□□□□ -2.44
TRAJ39-201ENST00000390498 KRTAP20-2Q3LI61 65 aa-0.2□□□□□ -2.44
TRAJ39-201ENST00000390498 TRRAPQ9Y4A5 3859 aa-0.2□□□□□ -2.44
TRAJ39-201ENST00000390498 HERC2O95714 4834 aa-0.21□□□□□ -2.44
TRAJ39-201ENST00000390498 RNF213Q63HN8 5207 aa-0.21□□□□□ -2.44
TRAJ39-201ENST00000390498 SPTAN1Q13813 2472 aaKnown RBP-0.21□□□□□ -2.44
TRAJ39-201ENST00000390498 TEX15Q9BXT5 2789 aa-0.23□□□□□ -2.45
TRAJ39-201ENST00000390498 BIRC6Q9NR09 4857 aa-0.24□□□□□ -2.45
TRAJ39-201ENST00000390498 LRBAP50851 2863 aa-0.24□□□□□ -2.45
TRAJ39-201ENST00000390498 SRCAPQ6ZRS2 3230 aa-0.24□□□□□ -2.45
TRAJ39-201ENST00000390498 DMXL2Q8TDJ6 3036 aa-0.24□□□□□ -2.45
TRAJ39-201ENST00000390498 DNAH5Q8TE73 4624 aa-0.25□□□□□ -2.45
TRAJ39-201ENST00000390498 RHPN1-AS1Q9BWJ2 59 aa-0.25□□□□□ -2.45
TRAJ39-201ENST00000390498 CFAP46Q8IYW2 2715 aa-0.25□□□□□ -2.45
TRAJ39-201ENST00000390498 LAMA2P24043 3122 aaKnown RBP-0.26□□□□□ -2.45
TRAJ39-201ENST00000390498 MYO9AB2RTY4 2548 aa-0.27□□□□□ -2.45
TRAJ39-201ENST00000390498 DEFB4AO15263 64 aa-0.27□□□□□ -2.45
TRAJ39-201ENST00000390498 DOPEY1Q5JWR5 2465 aa-0.28□□□□□ -2.45
TRAJ39-201ENST00000390498 MT1HL1P0DM35 61 aa-0.28□□□□□ -2.45
TRAJ39-201ENST00000390498 ARHGAP5-AS1Q96IT6 56 aa-0.28□□□□□ -2.45
TRAJ39-201ENST00000390498 HYDINQ4G0P3 5121 aa-0.28□□□□□ -2.45
TRAJ39-201ENST00000390498 NEBP20929 6669 aa-0.29□□□□□ -2.46
TRAJ39-201ENST00000390498 EYSQ5T1H1 3165 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms