RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 EEA1Q15075 1411 aa-0.97□□□□□ -2.56
TRAJ40-201ENST00000390497 DNHD1Q96M86 4753 aa-0.97□□□□□ -2.56
TRAJ40-201ENST00000390497 TEX15Q9BXT5 2789 aa-0.97□□□□□ -2.56
TRAJ40-201ENST00000390497 A8MTW9 85 aa-0.97□□□□□ -2.56
TRAJ40-201ENST00000390497 SPTBN5Q9NRC6 3674 aaKnown RBP-0.97□□□□□ -2.57
TRAJ40-201ENST00000390497 ABCA10Q8WWZ4 1543 aa-0.98□□□□□ -2.57
TRAJ40-201ENST00000390497 ALS2Q96Q42 1657 aa-0.98□□□□□ -2.57
TRAJ40-201ENST00000390497 DYNC2H1Q8NCM8 4307 aaKnown RBP-1□□□□□ -2.57
TRAJ40-201ENST00000390497 C5orf42Q9H799 3197 aa-1□□□□□ -2.57
TRAJ40-201ENST00000390497 IGIPA6NJ69 53 aa-1.01□□□□□ -2.57
TRAJ40-201ENST00000390497 LINC00308Q8TCZ7 52 aa-1.01□□□□□ -2.57
TRAJ40-201ENST00000390497 HYDINQ4G0P3 5121 aa-1.01□□□□□ -2.57
TRAJ40-201ENST00000390497 COL12A1Q99715 3063 aa-1.01□□□□□ -2.57
TRAJ40-201ENST00000390497 PREX2Q70Z35 1606 aa-1.01□□□□□ -2.57
TRAJ40-201ENST00000390497 A0A1B0GUL6 1792 aa-1.01□□□□□ -2.57
TRAJ40-201ENST00000390497 ITPR1Q14643 2758 aa-1.02□□□□□ -2.57
TRAJ40-201ENST00000390497 DOPEY1Q5JWR5 2465 aa-1.02□□□□□ -2.57
TRAJ40-201ENST00000390497 USP9XQ93008 2570 aaPredicted RBP-1.02□□□□□ -2.57
TRAJ40-201ENST00000390497 FAM208AQ9UK61 1670 aaKnown RBP-1.03□□□□□ -2.57
TRAJ40-201ENST00000390497 KAAG1Q9UBP8 84 aa-1.03□□□□□ -2.57
TRAJ40-201ENST00000390497 CELSR3Q9NYQ7 3312 aa-1.03□□□□□ -2.57
TRAJ40-201ENST00000390497 UGGT1Q9NYU2 1555 aa-1.04□□□□□ -2.58
TRAJ40-201ENST00000390497 SMIM27A0A1W2PRY6 76 aa-1.04□□□□□ -2.58
TRAJ40-201ENST00000390497 KIF21BO75037 1637 aa-1.04□□□□□ -2.58
TRAJ40-201ENST00000390497 RNF213Q63HN8 5207 aa-1.05□□□□□ -2.58
TRAJ40-201ENST00000390497 LINC01546A6NGU7 62 aa-1.05□□□□□ -2.58
TRAJ40-201ENST00000390497 MT1XP80297 61 aa-1.05□□□□□ -2.58
TRAJ40-201ENST00000390497 EFCAB6Q5THR3 1501 aa-1.05□□□□□ -2.58
TRAJ40-201ENST00000390497 S100ZQ8WXG8 99 aa-1.06□□□□□ -2.58
TRAJ40-201ENST00000390497 H0YGX0 51 aa-1.07□□□□□ -2.58
TRAJ40-201ENST00000390497 CPS1P31327 1500 aa-1.07□□□□□ -2.58
TRAJ40-201ENST00000390497 NIPBLQ6KC79 2804 aaeCLIP-1.08□□□□□ -2.58
TRAJ40-201ENST00000390497 MT1EP04732 61 aa-1.08□□□□□ -2.58
TRAJ40-201ENST00000390497 SMIM5Q71RC9 77 aa-1.08□□□□□ -2.58
TRAJ40-201ENST00000390497 WFDC10BQ8IUB3 73 aa-1.1□□□□□ -2.59
TRAJ40-201ENST00000390497 NEBP20929 6669 aa-1.1□□□□□ -2.59
TRAJ40-201ENST00000390497 DYNC1H1Q14204 4646 aaKnown RBP-1.11□□□□□ -2.59
TRAJ40-201ENST00000390497 CSMD1Q96PZ7 3565 aa-1.12□□□□□ -2.59
TRAJ40-201ENST00000390497 PRXQ9BXM0 1461 aa-1.12□□□□□ -2.59
TRAJ40-201ENST00000390497 DNAH17Q9UFH2 4485 aa-1.13□□□□□ -2.59
TRAJ40-201ENST00000390497 SPART-AS1P0CW21 52 aa-1.13□□□□□ -2.59
TRAJ40-201ENST00000390497 LMO7Q8WWI1 1683 aa-1.13□□□□□ -2.59
TRAJ40-201ENST00000390497 ABCA5Q8WWZ7 1642 aa-1.14□□□□□ -2.59
TRAJ40-201ENST00000390497 SPTAN1Q13813 2472 aaKnown RBP-1.14□□□□□ -2.59
TRAJ40-201ENST00000390497 MT1LQ93083 61 aa-1.14□□□□□ -2.59
TRAJ40-201ENST00000390497 RYR2Q92736 4967 aa-1.14□□□□□ -2.59
TRAJ40-201ENST00000390497 SRCAPQ6ZRS2 3230 aa-1.15□□□□□ -2.59
TRAJ40-201ENST00000390497 MGAQ8IWI9 3026 aa-1.15□□□□□ -2.59
TRAJ40-201ENST00000390497 RYR3Q15413 4870 aa-1.15□□□□□ -2.59
TRAJ40-201ENST00000390497 DEFB131AP59861 70 aa-1.16□□□□□ -2.6
TRAJ40-201ENST00000390497 KIAA1109Q2LD37 5005 aa-1.17□□□□□ -2.6
TRAJ40-201ENST00000390497 SMIM31A0A1B0GVY4 71 aa-1.17□□□□□ -2.6
TRAJ40-201ENST00000390497 SYCP2Q9BX26 1530 aa-1.17□□□□□ -2.6
TRAJ40-201ENST00000390497 DNAH10Q8IVF4 4471 aa-1.17□□□□□ -2.6
TRAJ40-201ENST00000390497 LRBAP50851 2863 aa-1.18□□□□□ -2.6
TRAJ40-201ENST00000390497 PLNP26678 52 aa-1.18□□□□□ -2.6
TRAJ40-201ENST00000390497 COL6A5A8TX70 2615 aa-1.19□□□□□ -2.6
TRAJ40-201ENST00000390497 MYO9AB2RTY4 2548 aa-1.19□□□□□ -2.6
TRAJ40-201ENST00000390497 CHD7Q9P2D1 2997 aa-1.19□□□□□ -2.6
TRAJ40-201ENST00000390497 AGLP35573 1532 aa-1.19□□□□□ -2.6
TRAJ40-201ENST00000390497 ADCY10Q96PN6 1610 aa-1.19□□□□□ -2.6
TRAJ40-201ENST00000390497 ADGRG4Q8IZF6 3080 aa-1.21□□□□□ -2.6
TRAJ40-201ENST00000390497 MT1HL1P0DM35 61 aa-1.21□□□□□ -2.6
TRAJ40-201ENST00000390497 MROH2AA6NES4 1674 aa-1.23□□□□□ -2.61
TRAJ40-201ENST00000390497 TRRAPQ9Y4A5 3859 aa-1.24□□□□□ -2.61
TRAJ40-201ENST00000390497 ABCC8Q09428 1581 aa-1.25□□□□□ -2.61
TRAJ40-201ENST00000390497 NRXN3Q9Y4C0 1643 aa-1.26□□□□□ -2.61
TRAJ40-201ENST00000390497 POLR2KP53803 58 aaKnown RBP-1.26□□□□□ -2.61
TRAJ40-201ENST00000390497 EYSQ5T1H1 3165 aa-1.26□□□□□ -2.61
TRAJ40-201ENST00000390497 ERICH3Q5RHP9 1530 aa-1.27□□□□□ -2.61
TRAJ40-201ENST00000390497 CEP295Q9C0D2 2601 aa-1.29□□□□□ -2.62
TRAJ40-201ENST00000390497 CSMD2Q7Z408 3487 aa-1.3□□□□□ -2.62
TRAJ40-201ENST00000390497 FANCD2Q9BXW9 1451 aa-1.3□□□□□ -2.62
TRAJ40-201ENST00000390497 DNAH5Q8TE73 4624 aa-1.3□□□□□ -2.62
TRAJ40-201ENST00000390497 CMC2Q9NRP2 79 aa-1.3□□□□□ -2.62
TRAJ40-201ENST00000390497 CFAP46Q8IYW2 2715 aa-1.3□□□□□ -2.62
TRAJ40-201ENST00000390497 TRPM2O94759 1503 aa-1.3□□□□□ -2.62
TRAJ40-201ENST00000390497 TFF3Q07654 80 aa-1.31□□□□□ -2.62
TRAJ40-201ENST00000390497 SMIM2Q9BVW6 85 aa-1.31□□□□□ -2.62
TRAJ40-201ENST00000390497 LEAP2Q969E1 77 aa-1.32□□□□□ -2.62
TRAJ40-201ENST00000390497 IQGAP1P46940 1657 aa-1.32□□□□□ -2.62
TRAJ40-201ENST00000390497 SMG1Q96Q15 3661 aaKnown RBP-1.33□□□□□ -2.62
TRAJ40-201ENST00000390497 MT1GP13640 62 aa-1.34□□□□□ -2.62
TRAJ40-201ENST00000390497 MT1MQ8N339 61 aa-1.35□□□□□ -2.63
TRAJ40-201ENST00000390497 CLTCL1P53675 1640 aa-1.36□□□□□ -2.63
TRAJ40-201ENST00000390497 MT2AP02795 61 aa-1.36□□□□□ -2.63
TRAJ40-201ENST00000390497 DEFB136Q30KP8 78 aa-1.37□□□□□ -2.63
TRAJ40-201ENST00000390497 ZFHX4Q86UP3 3567 aa-1.38□□□□□ -2.63
TRAJ40-201ENST00000390497 DDX60Q8IY21 1712 aaKnown RBP-1.38□□□□□ -2.63
TRAJ40-201ENST00000390497 NFAT5O94916 1531 aa-1.4□□□□□ -2.63
TRAJ40-201ENST00000390497 DEFB4AO15263 64 aa-1.41□□□□□ -2.64
TRAJ40-201ENST00000390497 ITPR2Q14571 2701 aa-1.42□□□□□ -2.64
TRAJ40-201ENST00000390497 CRYBG3Q68DQ2 2970 aa-1.44□□□□□ -2.64
TRAJ40-201ENST00000390497 DMXL2Q8TDJ6 3036 aa-1.45□□□□□ -2.64
TRAJ40-201ENST00000390497 NDUFA1O15239 70 aa-1.46□□□□□ -2.64
TRAJ40-201ENST00000390497 TLN1Q9Y490 2541 aaKnown RBP-1.5□□□□□ -2.65
TRAJ40-201ENST00000390497 MYO15AQ9UKN7 3530 aa-1.53□□□□□ -2.65
TRAJ40-201ENST00000390497 MT1BP07438 61 aa-1.53□□□□□ -2.65
TRAJ40-201ENST00000390497 PRUNE2Q8WUY3 3088 aa-1.53□□□□□ -2.65
TRAJ40-201ENST00000390497 VPS13CQ709C8 3753 aa-1.54□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms