RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 LRP1Q07954 4544 aaKnown RBP3.14□□□□□ -1.91
ERCC4-202ENST00000389138 Q6JHZ5 121 aa3.13□□□□□ -1.91
ERCC4-202ENST00000389138 SPAG11AQ6PDA7 123 aa3.13□□□□□ -1.91
ERCC4-202ENST00000389138 PKHD1L1Q86WI1 4243 aa3.13□□□□□ -1.91
ERCC4-202ENST00000389138 LRP2P98164 4655 aa3.12□□□□□ -1.91
ERCC4-202ENST00000389138 A0A096LNI7 61 aa3.12□□□□□ -1.91
ERCC4-202ENST00000389138 HAMPP81172 84 aa3.12□□□□□ -1.91
ERCC4-202ENST00000389138 ETDCA0A1B0GVM5 59 aa3.11□□□□□ -1.91
ERCC4-202ENST00000389138 UBL5Q9BZL1 73 aa3.11□□□□□ -1.91
ERCC4-202ENST00000389138 KCNQ1DNQ9H478 68 aa3.11□□□□□ -1.91
ERCC4-202ENST00000389138 SNURFQ9Y675 71 aa3.11□□□□□ -1.91
ERCC4-202ENST00000389138 KRTAP11-1Q8IUC1 163 aa3.11□□□□□ -1.91
ERCC4-202ENST00000389138 LOC110117498A0A087WWA1 95 aa3.1□□□□□ -1.91
ERCC4-202ENST00000389138 A0A1W2PNN7 141 aa3.1□□□□□ -1.91
ERCC4-202ENST00000389138 LRCOL1A6NCL2 159 aa3.1□□□□□ -1.91
ERCC4-202ENST00000389138 PRLHP81277 87 aa3.1□□□□□ -1.91
ERCC4-202ENST00000389138 Q6ZRX8 168 aa3.1□□□□□ -1.91
ERCC4-202ENST00000389138 DNAH8Q96JB1 4490 aa3.09□□□□□ -1.91
ERCC4-202ENST00000389138 TRBV7-4A0A0J9YYF1 115 aa3.09□□□□□ -1.91
ERCC4-202ENST00000389138 NBDYA0A0U1RRE5 68 aa3.09□□□□□ -1.91
ERCC4-202ENST00000389138 Q8N9L7 120 aa3.09□□□□□ -1.91
ERCC4-202ENST00000389138 A0A087WTM6 91 aa3.08□□□□□ -1.92
ERCC4-202ENST00000389138 TNXBP22105 4242 aa3.08□□□□□ -1.92
ERCC4-202ENST00000389138 FAT4Q6V0I7 4981 aa3.08□□□□□ -1.92
ERCC4-202ENST00000389138 LINC01558Q9Y6Z2 57 aa3.07□□□□□ -1.92
ERCC4-202ENST00000389138 SPRR1AP35321 89 aa3.07□□□□□ -1.92
ERCC4-202ENST00000389138 LINC00304Q8N9R0 145 aa3.07□□□□□ -1.92
ERCC4-202ENST00000389138 ATP5EP2Q5VTU8 51 aa3.06□□□□□ -1.92
ERCC4-202ENST00000389138 SMR3BP02814 79 aaPredicted RBP3.05□□□□□ -1.92
ERCC4-202ENST00000389138 KRTAP10-8P60410 259 aa3.05□□□□□ -1.92
ERCC4-202ENST00000389138 NREPQ16612 68 aa3.05□□□□□ -1.92
ERCC4-202ENST00000389138 Q6ZRN7 208 aaPredicted RBP3.05□□□□□ -1.92
ERCC4-202ENST00000389138 IGLV5-48A0A075B6I7 105 aa3.04□□□□□ -1.92
ERCC4-202ENST00000389138 KRTAP10-6P60371 365 aaPredicted RBP3.03□□□□□ -1.92
ERCC4-202ENST00000389138 KRTAP10-7P60409 375 aaPredicted RBP3.03□□□□□ -1.92
ERCC4-202ENST00000389138 PLAC8Q9NZF1 115 aa3.02□□□□□ -1.93
ERCC4-202ENST00000389138 IGKV4-1P06312 121 aa3.02□□□□□ -1.93
ERCC4-202ENST00000389138 KRTAP10-1P60331 282 aa3.02□□□□□ -1.93
ERCC4-202ENST00000389138 IGFL1Q6UW32 110 aa3.02□□□□□ -1.93
ERCC4-202ENST00000389138 MUC2Q02817 5179 aa3.01□□□□□ -1.93
ERCC4-202ENST00000389138 RPL37AP61513 92 aaKnown RBP3.01□□□□□ -1.93
ERCC4-202ENST00000389138 KRTAP13-2Q52LG2 175 aa3□□□□□ -1.93
ERCC4-202ENST00000389138 K7EQZ3 153 aa2.99□□□□□ -1.93
ERCC4-202ENST00000389138 ANAPC11Q9NYG5 84 aa2.99□□□□□ -1.93
ERCC4-202ENST00000389138 SPINK7P58062 85 aa2.99□□□□□ -1.93
ERCC4-202ENST00000389138 LINC00208Q96KT6 92 aa2.99□□□□□ -1.93
ERCC4-202ENST00000389138 SPRR4Q96PI1 79 aa2.99□□□□□ -1.93
ERCC4-202ENST00000389138 KRTAP1-4P0C5Y4 121 aa2.98□□□□□ -1.93
ERCC4-202ENST00000389138 Q96NJ1 140 aa2.98□□□□□ -1.93
ERCC4-202ENST00000389138 WFDC13Q8IUB5 93 aa2.97□□□□□ -1.93
ERCC4-202ENST00000389138 KRTAP13-1Q8IUC0 172 aa2.96□□□□□ -1.93
ERCC4-202ENST00000389138 LINC00472Q9H8W2 130 aa2.96□□□□□ -1.93
ERCC4-202ENST00000389138 UQCR11O14957 56 aa2.96□□□□□ -1.94
ERCC4-202ENST00000389138 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
ERCC4-202ENST00000389138 LPAP08519 4548 aa2.95□□□□□ -1.94
ERCC4-202ENST00000389138 SPRR1BP22528 89 aa2.94□□□□□ -1.94
ERCC4-202ENST00000389138 KRTAP10-4P60372 401 aaPredicted RBP2.94□□□□□ -1.94
ERCC4-202ENST00000389138 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
ERCC4-202ENST00000389138 MT1HL1P0DM35 61 aa2.93□□□□□ -1.94
ERCC4-202ENST00000389138 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
ERCC4-202ENST00000389138 FSIP2Q5CZC0 6907 aa2.91□□□□□ -1.94
ERCC4-202ENST00000389138 H0Y9P7 68 aa2.9□□□□□ -1.94
ERCC4-202ENST00000389138 SPINK6Q6UWN8 80 aa2.9□□□□□ -1.94
ERCC4-202ENST00000389138 SPATA8Q6RVD6 105 aa2.9□□□□□ -1.95
ERCC4-202ENST00000389138 Q6ZSA8 131 aa2.9□□□□□ -1.95
ERCC4-202ENST00000389138 INE1O15225 51 aa2.89□□□□□ -1.95
ERCC4-202ENST00000389138 COA5Q86WW8 74 aa2.89□□□□□ -1.95
ERCC4-202ENST00000389138 CRCT1Q9UGL9 99 aa2.88□□□□□ -1.95
ERCC4-202ENST00000389138 MMP24-AS1A0A0U1RRL7 71 aa2.87□□□□□ -1.95
ERCC4-202ENST00000389138 NDUFB1O75438 58 aa2.87□□□□□ -1.95
ERCC4-202ENST00000389138 ZCCHC13Q8WW36 166 aaKnown RBP2.85□□□□□ -1.95
ERCC4-202ENST00000389138 PCOTHQ58A44 107 aa2.84□□□□□ -1.96
ERCC4-202ENST00000389138 KRTAP10-12P60413 245 aa2.83□□□□□ -1.96
ERCC4-202ENST00000389138 ACYP2P14621 99 aa2.82□□□□□ -1.96
ERCC4-202ENST00000389138 MRPL34Q9BQ48 92 aaKnown RBP2.81□□□□□ -1.96
ERCC4-202ENST00000389138 SSBP3-AS1Q7Z2R9 100 aa2.8□□□□□ -1.96
ERCC4-202ENST00000389138 KRTAP10-5P60370 271 aa2.8□□□□□ -1.96
ERCC4-202ENST00000389138 TP53AIP1Q9HCN2 124 aa2.78□□□□□ -1.96
ERCC4-202ENST00000389138 MUC17Q685J3 4493 aa2.77□□□□□ -1.97
ERCC4-202ENST00000389138 KRTAP13-3Q3SY46 172 aa2.74□□□□□ -1.97
ERCC4-202ENST00000389138 A0A1B0GU69 56 aa2.74□□□□□ -1.97
ERCC4-202ENST00000389138 C9orf92A6NGG3 77 aa2.73□□□□□ -1.97
ERCC4-202ENST00000389138 SPINK1P00995 79 aa2.72□□□□□ -1.97
ERCC4-202ENST00000389138 LCE3CQ5T5A8 94 aa2.68□□□□□ -1.98
ERCC4-202ENST00000389138 PLAC4Q8WY50 150 aa2.68□□□□□ -1.98
ERCC4-202ENST00000389138 KRTAP5-9P26371 169 aa2.67□□□□□ -1.98
ERCC4-202ENST00000389138 PP632Q6XCG6 107 aa2.67□□□□□ -1.98
ERCC4-202ENST00000389138 KRTAP12-2P59991 146 aa2.65□□□□□ -1.99
ERCC4-202ENST00000389138 RPS29P62273 56 aaKnown RBP2.65□□□□□ -1.99
ERCC4-202ENST00000389138 KRTAP13-4Q3LI77 160 aa2.65□□□□□ -1.99
ERCC4-202ENST00000389138 KRTAP5-4Q6L8H1 288 aa2.65□□□□□ -1.99
ERCC4-202ENST00000389138 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
ERCC4-202ENST00000389138 KRTAP9-6A8MVA2 160 aa2.6□□□□□ -1.99
ERCC4-202ENST00000389138 SSPOA2VEC9 5147 aa2.6□□□□□ -1.99
ERCC4-202ENST00000389138 SYNE2Q8WXH0 6885 aaKnown RBP2.59□□□□□ -2
ERCC4-202ENST00000389138 MACF1Q9UPN3 7388 aaKnown RBP2.58□□□□□ -2
ERCC4-202ENST00000389138 USH2AO75445 5202 aa2.57□□□□□ -2
ERCC4-202ENST00000389138 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
ERCC4-202ENST00000389138 CRIPTQ9P021 101 aa2.56□□□□□ -2
ERCC4-202ENST00000389138 SPRR5A0A1B0GTR4 108 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms