RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 KRTAP10-4P60372 401 aaPredicted RBP6.37□□□□□ -1.39
ALK-201ENST00000389048 BSNQ9UPA5 3926 aa6.34□□□□□ -1.39
ALK-201ENST00000389048 ALMS1Q8TCU4 4167 aa6.32□□□□□ -1.4
ALK-201ENST00000389048 KRTAP23-1A1A580 65 aa6.27□□□□□ -1.41
ALK-201ENST00000389048 AKAP9Q99996 3911 aa6.23□□□□□ -1.41
ALK-201ENST00000389048 KRTAP4-1Q9BYQ7 146 aa6.13□□□□□ -1.43
ALK-201ENST00000389048 MT1HP80294 61 aa6.05□□□□□ -1.44
ALK-201ENST00000389048 KRTAP19-5Q3LI72 72 aa6.05□□□□□ -1.44
ALK-201ENST00000389048 SPRR2FQ96RM1 72 aa6.04□□□□□ -1.44
ALK-201ENST00000389048 DNAH1Q9P2D7 4330 aa6.01□□□□□ -1.45
ALK-201ENST00000389048 DNAH2Q9P225 4427 aa5.97□□□□□ -1.45
ALK-201ENST00000389048 DNAH9Q9NYC9 4486 aa5.97□□□□□ -1.45
ALK-201ENST00000389048 KRTAP10-7P60409 375 aaPredicted RBP5.96□□□□□ -1.45
ALK-201ENST00000389048 DNAH10Q8IVF4 4471 aa5.93□□□□□ -1.46
ALK-201ENST00000389048 MT2AP02795 61 aa5.93□□□□□ -1.46
ALK-201ENST00000389048 LCE3CQ5T5A8 94 aa5.89□□□□□ -1.47
ALK-201ENST00000389048 ZNF469Q96JG9 3925 aaPredicted RBP5.88□□□□□ -1.47
ALK-201ENST00000389048 DNAH8Q96JB1 4490 aa5.88□□□□□ -1.47
ALK-201ENST00000389048 DNAH5Q8TE73 4624 aa5.86□□□□□ -1.47
ALK-201ENST00000389048 MT1FP04733 61 aa5.86□□□□□ -1.47
ALK-201ENST00000389048 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
ALK-201ENST00000389048 ANK2Q01484 3957 aa5.79□□□□□ -1.48
ALK-201ENST00000389048 SPRR2GQ9BYE4 73 aa5.78□□□□□ -1.48
ALK-201ENST00000389048 FRAS1Q86XX4 4008 aa5.75□□□□□ -1.49
ALK-201ENST00000389048 DNAH3Q8TD57 4116 aa5.74□□□□□ -1.49
ALK-201ENST00000389048 PLECQ15149 4684 aaKnown RBP5.73□□□□□ -1.49
ALK-201ENST00000389048 DNAH11Q96DT5 4516 aa5.71□□□□□ -1.5
ALK-201ENST00000389048 SPRR2EP22531 72 aa5.68□□□□□ -1.5
ALK-201ENST00000389048 SPRR2BP35325 72 aa5.68□□□□□ -1.5
ALK-201ENST00000389048 SPRR2AP35326 72 aa5.68□□□□□ -1.5
ALK-201ENST00000389048 FAT1Q14517 4588 aa5.64□□□□□ -1.51
ALK-201ENST00000389048 MT1GP13640 62 aa5.63□□□□□ -1.51
ALK-201ENST00000389048 FAT2Q9NYQ8 4349 aa5.63□□□□□ -1.51
ALK-201ENST00000389048 KRTAP19-4Q3LI73 84 aa5.61□□□□□ -1.51
ALK-201ENST00000389048 DNAH17Q9UFH2 4485 aa5.61□□□□□ -1.51
ALK-201ENST00000389048 DNHD1Q96M86 4753 aa5.61□□□□□ -1.51
ALK-201ENST00000389048 VPS13BQ7Z7G8 4022 aa5.6□□□□□ -1.51
ALK-201ENST00000389048 KMT2AQ03164 3969 aa5.56□□□□□ -1.52
ALK-201ENST00000389048 LRP1BQ9NZR2 4599 aa5.56□□□□□ -1.52
ALK-201ENST00000389048 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
ALK-201ENST00000389048 VPS13DQ5THJ4 4388 aa5.52□□□□□ -1.53
ALK-201ENST00000389048 STARD9Q9P2P6 4700 aa5.52□□□□□ -1.53
ALK-201ENST00000389048 SACSQ9NZJ4 4579 aa5.46□□□□□ -1.53
ALK-201ENST00000389048 SPRR2DP22532 72 aa5.46□□□□□ -1.54
ALK-201ENST00000389048 DYNC2H1Q8NCM8 4307 aaKnown RBP5.46□□□□□ -1.54
ALK-201ENST00000389048 DYNC1H1Q14204 4646 aaKnown RBP5.44□□□□□ -1.54
ALK-201ENST00000389048 PRKDCP78527 4128 aaKnown RBP5.43□□□□□ -1.54
ALK-201ENST00000389048 KRTAP4-8A0A0G2JLE6 195 aa5.42□□□□□ -1.54
ALK-201ENST00000389048 KRTAP4-8Q9BYQ9 185 aa5.42□□□□□ -1.54
ALK-201ENST00000389048 RYR1P21817 5038 aa5.42□□□□□ -1.54
ALK-201ENST00000389048 DNAH7Q8WXX0 4024 aa5.41□□□□□ -1.54
ALK-201ENST00000389048 APOBP04114 4563 aaKnown RBP5.39□□□□□ -1.55
ALK-201ENST00000389048 LYSTQ99698 3801 aa5.38□□□□□ -1.55
ALK-201ENST00000389048 CMYA5Q8N3K9 4069 aa5.38□□□□□ -1.55
ALK-201ENST00000389048 DNAH6Q9C0G6 4158 aa5.36□□□□□ -1.55
ALK-201ENST00000389048 LCE2BO14633 110 aa5.36□□□□□ -1.55
ALK-201ENST00000389048 MT1XP80297 61 aa5.35□□□□□ -1.55
ALK-201ENST00000389048 KRTAP19-1Q8IUB9 90 aa5.31□□□□□ -1.56
ALK-201ENST00000389048 LCE3DQ9BYE3 92 aa5.27□□□□□ -1.57
ALK-201ENST00000389048 KRTAP17-1Q9BYP8 105 aa5.25□□□□□ -1.57
ALK-201ENST00000389048 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
ALK-201ENST00000389048 KRTAP19-8Q3LI54 63 aa5.2□□□□□ -1.58
ALK-201ENST00000389048 MT1BP07438 61 aa5.19□□□□□ -1.58
ALK-201ENST00000389048 RYR3Q15413 4870 aa5.15□□□□□ -1.58
ALK-201ENST00000389048 FAT3Q8TDW7 4589 aa5.14□□□□□ -1.59
ALK-201ENST00000389048 LCE3EQ5T5B0 92 aa5.13□□□□□ -1.59
ALK-201ENST00000389048 HECTD4Q9Y4D8 3996 aa5.1□□□□□ -1.59
ALK-201ENST00000389048 MYCBP2O75592 4640 aa5.09□□□□□ -1.6
ALK-201ENST00000389048 LPAP08519 4548 aa5.08□□□□□ -1.6
ALK-201ENST00000389048 KRTAP9-8Q9BYQ0 159 aa5.07□□□□□ -1.6
ALK-201ENST00000389048 SPRR5A0A1B0GTR4 108 aa5.05□□□□□ -1.6
ALK-201ENST00000389048 LCE2CQ5TA81 110 aa5.04□□□□□ -1.6
ALK-201ENST00000389048 MT4P47944 62 aa5.03□□□□□ -1.6
ALK-201ENST00000389048 PRM1P04553 51 aa5□□□□□ -1.61
ALK-201ENST00000389048 LCE2DQ5TA82 110 aaPredicted RBP5□□□□□ -1.61
ALK-201ENST00000389048 LOC100996750A0A140TA64 210 aa5□□□□□ -1.61
ALK-201ENST00000389048 LRP1Q07954 4544 aaKnown RBP4.99□□□□□ -1.61
ALK-201ENST00000389048 PKD1P98161 4303 aa4.97□□□□□ -1.61
ALK-201ENST00000389048 KRTAP9-3Q9BYQ3 159 aa4.96□□□□□ -1.62
ALK-201ENST00000389048 KRTAP19-3Q7Z4W3 81 aa4.92□□□□□ -1.62
ALK-201ENST00000389048 LCE1BQ5T7P3 118 aa4.91□□□□□ -1.62
ALK-201ENST00000389048 HERC1Q15751 4861 aa4.9□□□□□ -1.63
ALK-201ENST00000389048 MT1LQ93083 61 aa4.88□□□□□ -1.63
ALK-201ENST00000389048 KRTAP4-3Q9BYR4 195 aa4.88□□□□□ -1.63
ALK-201ENST00000389048 HSPG2P98160 4391 aa4.87□□□□□ -1.63
ALK-201ENST00000389048 KRTAP9-2Q9BYQ4 174 aa4.86□□□□□ -1.63
ALK-201ENST00000389048 KIAA1109Q2LD37 5005 aa4.86□□□□□ -1.63
ALK-201ENST00000389048 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
ALK-201ENST00000389048 PKHD1L1Q86WI1 4243 aa4.83□□□□□ -1.64
ALK-201ENST00000389048 MT1EP04732 61 aa4.8□□□□□ -1.64
ALK-201ENST00000389048 HERC2O95714 4834 aa4.75□□□□□ -1.65
ALK-201ENST00000389048 RYR2Q92736 4967 aa4.75□□□□□ -1.65
ALK-201ENST00000389048 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
ALK-201ENST00000389048 BIRC6Q9NR09 4857 aa4.74□□□□□ -1.65
ALK-201ENST00000389048 PKHD1P08F94 4074 aa4.73□□□□□ -1.65
ALK-201ENST00000389048 KRTAP9-6A0A140TA67 174 aa4.71□□□□□ -1.66
ALK-201ENST00000389048 MT1MQ8N339 61 aa4.7□□□□□ -1.66
ALK-201ENST00000389048 MT3P25713 68 aa4.7□□□□□ -1.66
ALK-201ENST00000389048 HYDINQ4G0P3 5121 aa4.68□□□□□ -1.66
ALK-201ENST00000389048 TNXBP22105 4242 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms