RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 SPRR2GQ9BYE4 73 aa6.7□□□□□ -1.34
SNAPC3-202ENST00000380821 BSNQ9UPA5 3926 aa6.68□□□□□ -1.34
SNAPC3-202ENST00000380821 KRTAP4-1Q9BYQ7 146 aa6.67□□□□□ -1.34
SNAPC3-202ENST00000380821 DNAH10Q8IVF4 4471 aa6.67□□□□□ -1.34
SNAPC3-202ENST00000380821 DNAH11Q96DT5 4516 aa6.66□□□□□ -1.34
SNAPC3-202ENST00000380821 MT1HP80294 61 aa6.65□□□□□ -1.34
SNAPC3-202ENST00000380821 DNAH9Q9NYC9 4486 aa6.64□□□□□ -1.35
SNAPC3-202ENST00000380821 DNAH1Q9P2D7 4330 aa6.62□□□□□ -1.35
SNAPC3-202ENST00000380821 CSMD2Q7Z408 3487 aa6.59□□□□□ -1.36
SNAPC3-202ENST00000380821 MT2AP02795 61 aa6.59□□□□□ -1.36
SNAPC3-202ENST00000380821 COL7A1Q02388 2944 aa6.58□□□□□ -1.36
SNAPC3-202ENST00000380821 AKAP9Q99996 3911 aa6.56□□□□□ -1.36
SNAPC3-202ENST00000380821 LCE3CQ5T5A8 94 aa6.56□□□□□ -1.36
SNAPC3-202ENST00000380821 DNAH5Q8TE73 4624 aa6.54□□□□□ -1.36
SNAPC3-202ENST00000380821 DNAH17Q9UFH2 4485 aa6.54□□□□□ -1.36
SNAPC3-202ENST00000380821 KRTAP19-5Q3LI72 72 aa6.53□□□□□ -1.36
SNAPC3-202ENST00000380821 KRTAP19-4Q3LI73 84 aa6.51□□□□□ -1.37
SNAPC3-202ENST00000380821 DNAH3Q8TD57 4116 aa6.46□□□□□ -1.38
SNAPC3-202ENST00000380821 VPS13CQ709C8 3753 aa6.43□□□□□ -1.38
SNAPC3-202ENST00000380821 MT1FP04733 61 aa6.42□□□□□ -1.38
SNAPC3-202ENST00000380821 VPS13DQ5THJ4 4388 aa6.41□□□□□ -1.38
SNAPC3-202ENST00000380821 DNAH8Q96JB1 4490 aa6.38□□□□□ -1.39
SNAPC3-202ENST00000380821 KRTAP10-7P60409 375 aaPredicted RBP6.38□□□□□ -1.39
SNAPC3-202ENST00000380821 PLECQ15149 4684 aaKnown RBP6.34□□□□□ -1.39
SNAPC3-202ENST00000380821 SACSQ9NZJ4 4579 aa6.32□□□□□ -1.4
SNAPC3-202ENST00000380821 DYNC2H1Q8NCM8 4307 aaKnown RBP6.27□□□□□ -1.41
SNAPC3-202ENST00000380821 SPRR2FQ96RM1 72 aa6.26□□□□□ -1.41
SNAPC3-202ENST00000380821 DYNC1H1Q14204 4646 aaKnown RBP6.23□□□□□ -1.41
SNAPC3-202ENST00000380821 CMYA5Q8N3K9 4069 aa6.23□□□□□ -1.41
SNAPC3-202ENST00000380821 FAT2Q9NYQ8 4349 aa6.22□□□□□ -1.41
SNAPC3-202ENST00000380821 KRTAP19-8Q3LI54 63 aa6.17□□□□□ -1.42
SNAPC3-202ENST00000380821 CSMD3Q7Z407 3707 aa6.17□□□□□ -1.42
SNAPC3-202ENST00000380821 LRP1BQ9NZR2 4599 aa6.13□□□□□ -1.43
SNAPC3-202ENST00000380821 DNAH6Q9C0G6 4158 aa6.09□□□□□ -1.43
SNAPC3-202ENST00000380821 ZNF469Q96JG9 3925 aaPredicted RBP6.09□□□□□ -1.44
SNAPC3-202ENST00000380821 FAT1Q14517 4588 aa6.08□□□□□ -1.44
SNAPC3-202ENST00000380821 SPRR5A0A1B0GTR4 108 aa6.08□□□□□ -1.44
SNAPC3-202ENST00000380821 KRTAP19-1Q8IUB9 90 aa6.06□□□□□ -1.44
SNAPC3-202ENST00000380821 ANK2Q01484 3957 aa6.03□□□□□ -1.44
SNAPC3-202ENST00000380821 DNAH7Q8WXX0 4024 aa6.02□□□□□ -1.45
SNAPC3-202ENST00000380821 MT1XP80297 61 aa6.02□□□□□ -1.45
SNAPC3-202ENST00000380821 STARD9Q9P2P6 4700 aa6□□□□□ -1.45
SNAPC3-202ENST00000380821 KRTAP12-4P60329 112 aa5.99□□□□□ -1.45
SNAPC3-202ENST00000380821 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
SNAPC3-202ENST00000380821 DNHD1Q96M86 4753 aa5.98□□□□□ -1.45
SNAPC3-202ENST00000380821 PRKDCP78527 4128 aaKnown RBP5.97□□□□□ -1.45
SNAPC3-202ENST00000380821 APOBP04114 4563 aaKnown RBP5.96□□□□□ -1.46
SNAPC3-202ENST00000380821 MT1GP13640 62 aa5.89□□□□□ -1.47
SNAPC3-202ENST00000380821 SPRR2EP22531 72 aa5.88□□□□□ -1.47
SNAPC3-202ENST00000380821 SPRR2BP35325 72 aa5.88□□□□□ -1.47
SNAPC3-202ENST00000380821 SPRR2AP35326 72 aa5.88□□□□□ -1.47
SNAPC3-202ENST00000380821 HERC1Q15751 4861 aa5.88□□□□□ -1.47
SNAPC3-202ENST00000380821 MT1BP07438 61 aa5.88□□□□□ -1.47
SNAPC3-202ENST00000380821 LRP1Q07954 4544 aaKnown RBP5.87□□□□□ -1.47
SNAPC3-202ENST00000380821 VPS13BQ7Z7G8 4022 aa5.87□□□□□ -1.47
SNAPC3-202ENST00000380821 HSPG2P98160 4391 aa5.84□□□□□ -1.48
SNAPC3-202ENST00000380821 FAT3Q8TDW7 4589 aa5.81□□□□□ -1.48
SNAPC3-202ENST00000380821 RYR1P21817 5038 aa5.77□□□□□ -1.49
SNAPC3-202ENST00000380821 LCE3DQ9BYE3 92 aa5.75□□□□□ -1.49
SNAPC3-202ENST00000380821 KRTAP9-8Q9BYQ0 159 aa5.75□□□□□ -1.49
SNAPC3-202ENST00000380821 SPRR2DP22532 72 aa5.71□□□□□ -1.5
SNAPC3-202ENST00000380821 LCE2BO14633 110 aa5.7□□□□□ -1.5
SNAPC3-202ENST00000380821 RYR3Q15413 4870 aa5.7□□□□□ -1.5
SNAPC3-202ENST00000380821 FRAS1Q86XX4 4008 aa5.7□□□□□ -1.5
SNAPC3-202ENST00000380821 KMT2AQ03164 3969 aa5.7□□□□□ -1.5
SNAPC3-202ENST00000380821 KRTAP17-1Q9BYP8 105 aa5.69□□□□□ -1.5
SNAPC3-202ENST00000380821 LCE3EQ5T5B0 92 aa5.69□□□□□ -1.5
SNAPC3-202ENST00000380821 KRTAP4-8A0A0G2JLE6 195 aa5.66□□□□□ -1.5
SNAPC3-202ENST00000380821 KRTAP4-8Q9BYQ9 185 aa5.66□□□□□ -1.5
SNAPC3-202ENST00000380821 KRTAP9-3Q9BYQ3 159 aa5.65□□□□□ -1.51
SNAPC3-202ENST00000380821 MYCBP2O75592 4640 aa5.6□□□□□ -1.51
SNAPC3-202ENST00000380821 HECTD4Q9Y4D8 3996 aa5.6□□□□□ -1.51
SNAPC3-202ENST00000380821 LCE2CQ5TA81 110 aa5.57□□□□□ -1.52
SNAPC3-202ENST00000380821 RYR2Q92736 4967 aa5.56□□□□□ -1.52
SNAPC3-202ENST00000380821 MT1LQ93083 61 aa5.53□□□□□ -1.52
SNAPC3-202ENST00000380821 KRTAP19-3Q7Z4W3 81 aa5.51□□□□□ -1.53
SNAPC3-202ENST00000380821 PKHD1L1Q86WI1 4243 aa5.47□□□□□ -1.53
SNAPC3-202ENST00000380821 PKD1P98161 4303 aa5.45□□□□□ -1.54
SNAPC3-202ENST00000380821 MT1EP04732 61 aa5.43□□□□□ -1.54
SNAPC3-202ENST00000380821 BIRC6Q9NR09 4857 aa5.42□□□□□ -1.54
SNAPC3-202ENST00000380821 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
SNAPC3-202ENST00000380821 LYSTQ99698 3801 aa5.4□□□□□ -1.55
SNAPC3-202ENST00000380821 PRM1P04553 51 aa5.37□□□□□ -1.55
SNAPC3-202ENST00000380821 MT1MQ8N339 61 aa5.27□□□□□ -1.57
SNAPC3-202ENST00000380821 KRTAP19-2Q3LHN2 52 aa5.27□□□□□ -1.57
SNAPC3-202ENST00000380821 MT3P25713 68 aa5.26□□□□□ -1.57
SNAPC3-202ENST00000380821 MUC17Q685J3 4493 aa5.25□□□□□ -1.57
SNAPC3-202ENST00000380821 KIAA1109Q2LD37 5005 aa5.24□□□□□ -1.57
SNAPC3-202ENST00000380821 HYDINQ4G0P3 5121 aa5.2□□□□□ -1.58
SNAPC3-202ENST00000380821 LCE2DQ5TA82 110 aaPredicted RBP5.18□□□□□ -1.58
SNAPC3-202ENST00000380821 HERC2O95714 4834 aa5.18□□□□□ -1.58
SNAPC3-202ENST00000380821 TNXBP22105 4242 aa5.16□□□□□ -1.58
SNAPC3-202ENST00000380821 LOC100996750A0A140TA64 210 aa5.13□□□□□ -1.59
SNAPC3-202ENST00000380821 PKHD1P08F94 4074 aa5.13□□□□□ -1.59
SNAPC3-202ENST00000380821 KRTAP19-6Q3LI70 58 aa5.08□□□□□ -1.6
SNAPC3-202ENST00000380821 FLGP20930 4061 aaPredicted RBP5.08□□□□□ -1.6
SNAPC3-202ENST00000380821 LPAP08519 4548 aa5.06□□□□□ -1.6
SNAPC3-202ENST00000380821 KRTAP2-3P0C7H8 128 aa5.03□□□□□ -1.6
SNAPC3-202ENST00000380821 KRTAP9-2Q9BYQ4 174 aa5.03□□□□□ -1.6
SNAPC3-202ENST00000380821 KRTAP2-4Q9BYR9 128 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms