RNA–Protein interactions for RNA: ENST00000374232.7

SNX30-201, Transcript of sorting nexin family member 30, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX30, Length 7,622 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-201ENST00000374232 ZNF469Q96JG9 3925 aaPredicted RBP6.32□□□□□ -1.4
SNX30-201ENST00000374232 MT1HL1P0DM35 61 aa6.31□□□□□ -1.4
SNX30-201ENST00000374232 KRTAP8-1Q8IUC2 63 aa6.17□□□□□ -1.42
SNX30-201ENST00000374232 DNAH10Q8IVF4 4471 aa6.04□□□□□ -1.44
SNX30-201ENST00000374232 FRAS1Q86XX4 4008 aa6.04□□□□□ -1.44
SNX30-201ENST00000374232 ALMS1Q8TCU4 4167 aa6□□□□□ -1.45
SNX30-201ENST00000374232 KRTAP10-4P60372 401 aaPredicted RBP5.96□□□□□ -1.46
SNX30-201ENST00000374232 DNAH2Q9P225 4427 aa5.96□□□□□ -1.46
SNX30-201ENST00000374232 DNAH1Q9P2D7 4330 aa5.95□□□□□ -1.46
SNX30-201ENST00000374232 ANK2Q01484 3957 aa5.9□□□□□ -1.46
SNX30-201ENST00000374232 DNAH9Q9NYC9 4486 aa5.89□□□□□ -1.47
SNX30-201ENST00000374232 LYSTQ99698 3801 aa5.85□□□□□ -1.47
SNX30-201ENST00000374232 KRTAP4-1Q9BYQ7 146 aa5.84□□□□□ -1.47
SNX30-201ENST00000374232 KMT2AQ03164 3969 aa5.82□□□□□ -1.48
SNX30-201ENST00000374232 VPS13BQ7Z7G8 4022 aa5.8□□□□□ -1.48
SNX30-201ENST00000374232 SPRR2FQ96RM1 72 aa5.78□□□□□ -1.48
SNX30-201ENST00000374232 DNAH8Q96JB1 4490 aa5.78□□□□□ -1.48
SNX30-201ENST00000374232 KRTAP23-1A1A580 65 aa5.77□□□□□ -1.49
SNX30-201ENST00000374232 KRTAP10-7P60409 375 aaPredicted RBP5.73□□□□□ -1.49
SNX30-201ENST00000374232 DNAH3Q8TD57 4116 aa5.71□□□□□ -1.5
SNX30-201ENST00000374232 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
SNX30-201ENST00000374232 MT1HP80294 61 aa5.68□□□□□ -1.5
SNX30-201ENST00000374232 PLECQ15149 4684 aaKnown RBP5.67□□□□□ -1.5
SNX30-201ENST00000374232 CMYA5Q8N3K9 4069 aa5.66□□□□□ -1.5
SNX30-201ENST00000374232 DNAH11Q96DT5 4516 aa5.65□□□□□ -1.51
SNX30-201ENST00000374232 DNAH5Q8TE73 4624 aa5.63□□□□□ -1.51
SNX30-201ENST00000374232 MT2AP02795 61 aa5.55□□□□□ -1.52
SNX30-201ENST00000374232 FAT2Q9NYQ8 4349 aa5.54□□□□□ -1.52
SNX30-201ENST00000374232 DNAH17Q9UFH2 4485 aa5.53□□□□□ -1.52
SNX30-201ENST00000374232 MT1FP04733 61 aa5.52□□□□□ -1.53
SNX30-201ENST00000374232 STARD9Q9P2P6 4700 aa5.51□□□□□ -1.53
SNX30-201ENST00000374232 LCE3BQ5TA77 95 aa5.5□□□□□ -1.53
SNX30-201ENST00000374232 FAT1Q14517 4588 aa5.48□□□□□ -1.53
SNX30-201ENST00000374232 LCE3CQ5T5A8 94 aa5.47□□□□□ -1.53
SNX30-201ENST00000374232 DNAH7Q8WXX0 4024 aa5.47□□□□□ -1.53
SNX30-201ENST00000374232 LRP1BQ9NZR2 4599 aa5.45□□□□□ -1.54
SNX30-201ENST00000374232 SPRR2EP22531 72 aa5.44□□□□□ -1.54
SNX30-201ENST00000374232 SPRR2BP35325 72 aa5.44□□□□□ -1.54
SNX30-201ENST00000374232 SPRR2AP35326 72 aa5.44□□□□□ -1.54
SNX30-201ENST00000374232 PRKDCP78527 4128 aaKnown RBP5.42□□□□□ -1.54
SNX30-201ENST00000374232 DNAH6Q9C0G6 4158 aa5.4□□□□□ -1.55
SNX30-201ENST00000374232 VPS13DQ5THJ4 4388 aa5.39□□□□□ -1.55
SNX30-201ENST00000374232 SPRR2GQ9BYE4 73 aa5.37□□□□□ -1.55
SNX30-201ENST00000374232 APOBP04114 4563 aaKnown RBP5.35□□□□□ -1.55
SNX30-201ENST00000374232 DYNC2H1Q8NCM8 4307 aaKnown RBP5.34□□□□□ -1.56
SNX30-201ENST00000374232 SACSQ9NZJ4 4579 aa5.33□□□□□ -1.56
SNX30-201ENST00000374232 MT1GP13640 62 aa5.33□□□□□ -1.56
SNX30-201ENST00000374232 HECTD4Q9Y4D8 3996 aa5.29□□□□□ -1.56
SNX30-201ENST00000374232 SPRR2DP22532 72 aa5.23□□□□□ -1.57
SNX30-201ENST00000374232 KRTAP4-8A0A0G2JLE6 195 aa5.2□□□□□ -1.58
SNX30-201ENST00000374232 KRTAP4-8Q9BYQ9 185 aa5.2□□□□□ -1.58
SNX30-201ENST00000374232 LPAP08519 4548 aa5.19□□□□□ -1.58
SNX30-201ENST00000374232 DYNC1H1Q14204 4646 aaKnown RBP5.19□□□□□ -1.58
SNX30-201ENST00000374232 FAT3Q8TDW7 4589 aa5.19□□□□□ -1.58
SNX30-201ENST00000374232 KRTAP12-4P60329 112 aa5.19□□□□□ -1.58
SNX30-201ENST00000374232 LCE2BO14633 110 aa5.16□□□□□ -1.58
SNX30-201ENST00000374232 MYCBP2O75592 4640 aa5.15□□□□□ -1.59
SNX30-201ENST00000374232 KRTAP17-1Q9BYP8 105 aa5.1□□□□□ -1.59
SNX30-201ENST00000374232 RYR1P21817 5038 aa5.05□□□□□ -1.6
SNX30-201ENST00000374232 KRTAP4-7Q9BYR0 210 aa5.04□□□□□ -1.6
SNX30-201ENST00000374232 DNHD1Q96M86 4753 aa5.04□□□□□ -1.6
SNX30-201ENST00000374232 LRP1Q07954 4544 aaKnown RBP5.03□□□□□ -1.6
SNX30-201ENST00000374232 MT1XP80297 61 aa5.02□□□□□ -1.61
SNX30-201ENST00000374232 PKD1P98161 4303 aa5□□□□□ -1.61
SNX30-201ENST00000374232 KRTAP19-1Q8IUB9 90 aa4.99□□□□□ -1.61
SNX30-201ENST00000374232 LCE3DQ9BYE3 92 aa4.94□□□□□ -1.62
SNX30-201ENST00000374232 FLGP20930 4061 aaPredicted RBP4.92□□□□□ -1.62
SNX30-201ENST00000374232 PKHD1P08F94 4074 aa4.92□□□□□ -1.62
SNX30-201ENST00000374232 LCE2CQ5TA81 110 aa4.89□□□□□ -1.63
SNX30-201ENST00000374232 MT1BP07438 61 aa4.86□□□□□ -1.63
SNX30-201ENST00000374232 HSPG2P98160 4391 aa4.86□□□□□ -1.63
SNX30-201ENST00000374232 MT4P47944 62 aa4.85□□□□□ -1.63
SNX30-201ENST00000374232 LCE2DQ5TA82 110 aaPredicted RBP4.84□□□□□ -1.64
SNX30-201ENST00000374232 LOC100996750A0A140TA64 210 aa4.81□□□□□ -1.64
SNX30-201ENST00000374232 KRTAP19-8Q3LI54 63 aa4.79□□□□□ -1.64
SNX30-201ENST00000374232 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
SNX30-201ENST00000374232 LCE3EQ5T5B0 92 aa4.78□□□□□ -1.64
SNX30-201ENST00000374232 PKHD1L1Q86WI1 4243 aa4.76□□□□□ -1.65
SNX30-201ENST00000374232 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
SNX30-201ENST00000374232 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
SNX30-201ENST00000374232 KRTAP4-3Q9BYR4 195 aa4.71□□□□□ -1.65
SNX30-201ENST00000374232 LCE1BQ5T7P3 118 aa4.71□□□□□ -1.66
SNX30-201ENST00000374232 TNXBP22105 4242 aa4.71□□□□□ -1.66
SNX30-201ENST00000374232 PRM1P04553 51 aa4.7□□□□□ -1.66
SNX30-201ENST00000374232 RYR3Q15413 4870 aa4.69□□□□□ -1.66
SNX30-201ENST00000374232 LRP2P98164 4655 aa4.67□□□□□ -1.66
SNX30-201ENST00000374232 KRTAP9-3Q9BYQ3 159 aa4.65□□□□□ -1.67
SNX30-201ENST00000374232 LCE1DQ5T752 114 aa4.64□□□□□ -1.67
SNX30-201ENST00000374232 KRTAP19-3Q7Z4W3 81 aa4.6□□□□□ -1.67
SNX30-201ENST00000374232 HYDINQ4G0P3 5121 aa4.59□□□□□ -1.68
SNX30-201ENST00000374232 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
SNX30-201ENST00000374232 MT1LQ93083 61 aa4.55□□□□□ -1.68
SNX30-201ENST00000374232 MT1EP04732 61 aa4.48□□□□□ -1.69
SNX30-201ENST00000374232 SYNE2Q8WXH0 6885 aaKnown RBP4.47□□□□□ -1.69
SNX30-201ENST00000374232 MT3P25713 68 aa4.43□□□□□ -1.7
SNX30-201ENST00000374232 LCE5AQ5TCM9 118 aa4.4□□□□□ -1.7
SNX30-201ENST00000374232 MT1MQ8N339 61 aa4.39□□□□□ -1.71
SNX30-201ENST00000374232 KRTAP9-2Q9BYQ4 174 aa4.36□□□□□ -1.71
SNX30-201ENST00000374232 KMT2CQ8NEZ4 4911 aaKnown RBP4.32□□□□□ -1.72
SNX30-201ENST00000374232 MUC17Q685J3 4493 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms