RNA–Protein interactions for RNA: ENST00000373758.4

REEP3-201, Transcript of receptor accessory protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene REEP3, Length 5,205 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3-201ENST00000373758 KRTAP12-3P60328 96 aa6.46□□□□□ -1.38
REEP3-201ENST00000373758 DNAH10Q8IVF4 4471 aa6.34□□□□□ -1.4
REEP3-201ENST00000373758 DNAH11Q96DT5 4516 aa6.26□□□□□ -1.41
REEP3-201ENST00000373758 CRCT1Q9UGL9 99 aa6.26□□□□□ -1.41
REEP3-201ENST00000373758 PLECQ15149 4684 aaKnown RBP6.24□□□□□ -1.41
REEP3-201ENST00000373758 DNAH1Q9P2D7 4330 aa6.24□□□□□ -1.41
REEP3-201ENST00000373758 DNAH9Q9NYC9 4486 aa6.24□□□□□ -1.41
REEP3-201ENST00000373758 DNAH5Q8TE73 4624 aa6.23□□□□□ -1.41
REEP3-201ENST00000373758 KRTAP4-5Q9BYR2 181 aa6.2□□□□□ -1.42
REEP3-201ENST00000373758 ALMS1Q8TCU4 4167 aa6.19□□□□□ -1.42
REEP3-201ENST00000373758 DNAH8Q96JB1 4490 aa6.15□□□□□ -1.42
REEP3-201ENST00000373758 FAT1Q14517 4588 aa6.15□□□□□ -1.42
REEP3-201ENST00000373758 DNAH2Q9P225 4427 aa6.1□□□□□ -1.43
REEP3-201ENST00000373758 ANK2Q01484 3957 aa6.04□□□□□ -1.44
REEP3-201ENST00000373758 DNAH17Q9UFH2 4485 aa6.02□□□□□ -1.45
REEP3-201ENST00000373758 KRTAP4-1Q9BYQ7 146 aa6.02□□□□□ -1.45
REEP3-201ENST00000373758 KRTAP10-5P60370 271 aa6.01□□□□□ -1.45
REEP3-201ENST00000373758 LRP1BQ9NZR2 4599 aa6□□□□□ -1.45
REEP3-201ENST00000373758 VPS13DQ5THJ4 4388 aa5.99□□□□□ -1.45
REEP3-201ENST00000373758 CMYA5Q8N3K9 4069 aa5.98□□□□□ -1.45
REEP3-201ENST00000373758 STARD9Q9P2P6 4700 aa5.98□□□□□ -1.45
REEP3-201ENST00000373758 DNHD1Q96M86 4753 aa5.96□□□□□ -1.45
REEP3-201ENST00000373758 MYCBP2O75592 4640 aa5.89□□□□□ -1.47
REEP3-201ENST00000373758 DYNC1H1Q14204 4646 aaKnown RBP5.89□□□□□ -1.47
REEP3-201ENST00000373758 LYSTQ99698 3801 aa5.85□□□□□ -1.47
REEP3-201ENST00000373758 KMT2AQ03164 3969 aa5.84□□□□□ -1.47
REEP3-201ENST00000373758 SPRR2GQ9BYE4 73 aa5.83□□□□□ -1.48
REEP3-201ENST00000373758 APOBP04114 4563 aaKnown RBP5.82□□□□□ -1.48
REEP3-201ENST00000373758 FRAS1Q86XX4 4008 aa5.8□□□□□ -1.48
REEP3-201ENST00000373758 KRTAP8-1Q8IUC2 63 aa5.8□□□□□ -1.48
REEP3-201ENST00000373758 SACSQ9NZJ4 4579 aa5.78□□□□□ -1.48
REEP3-201ENST00000373758 DNAH3Q8TD57 4116 aa5.78□□□□□ -1.48
REEP3-201ENST00000373758 RYR1P21817 5038 aa5.77□□□□□ -1.48
REEP3-201ENST00000373758 VPS13BQ7Z7G8 4022 aa5.77□□□□□ -1.49
REEP3-201ENST00000373758 PRKDCP78527 4128 aaKnown RBP5.75□□□□□ -1.49
REEP3-201ENST00000373758 MT2AP02795 61 aa5.72□□□□□ -1.49
REEP3-201ENST00000373758 LCE3CQ5T5A8 94 aa5.7□□□□□ -1.5
REEP3-201ENST00000373758 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
REEP3-201ENST00000373758 DYNC2H1Q8NCM8 4307 aaKnown RBP5.68□□□□□ -1.5
REEP3-201ENST00000373758 MT1HP80294 61 aa5.67□□□□□ -1.5
REEP3-201ENST00000373758 SPRR5A0A1B0GTR4 108 aa5.65□□□□□ -1.51
REEP3-201ENST00000373758 MT1FP04733 61 aa5.64□□□□□ -1.51
REEP3-201ENST00000373758 DNAH7Q8WXX0 4024 aa5.63□□□□□ -1.51
REEP3-201ENST00000373758 FAT2Q9NYQ8 4349 aa5.62□□□□□ -1.51
REEP3-201ENST00000373758 FAT3Q8TDW7 4589 aa5.61□□□□□ -1.51
REEP3-201ENST00000373758 DNAH6Q9C0G6 4158 aa5.61□□□□□ -1.51
REEP3-201ENST00000373758 LRP1Q07954 4544 aaKnown RBP5.59□□□□□ -1.51
REEP3-201ENST00000373758 KIAA1109Q2LD37 5005 aa5.56□□□□□ -1.52
REEP3-201ENST00000373758 KRTAP19-1Q8IUB9 90 aa5.52□□□□□ -1.53
REEP3-201ENST00000373758 HECTD4Q9Y4D8 3996 aa5.52□□□□□ -1.53
REEP3-201ENST00000373758 KRTAP10-7P60409 375 aaPredicted RBP5.49□□□□□ -1.53
REEP3-201ENST00000373758 KRTAP17-1Q9BYP8 105 aa5.44□□□□□ -1.54
REEP3-201ENST00000373758 LRP2P98164 4655 aa5.41□□□□□ -1.54
REEP3-201ENST00000373758 RYR3Q15413 4870 aa5.39□□□□□ -1.55
REEP3-201ENST00000373758 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
REEP3-201ENST00000373758 KRTAP19-8Q3LI54 63 aa5.36□□□□□ -1.55
REEP3-201ENST00000373758 MT1XP80297 61 aa5.36□□□□□ -1.55
REEP3-201ENST00000373758 HYDINQ4G0P3 5121 aa5.3□□□□□ -1.56
REEP3-201ENST00000373758 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
REEP3-201ENST00000373758 PKHD1P08F94 4074 aa5.28□□□□□ -1.56
REEP3-201ENST00000373758 MT1BP07438 61 aa5.24□□□□□ -1.57
REEP3-201ENST00000373758 SPRR2FQ96RM1 72 aa5.21□□□□□ -1.58
REEP3-201ENST00000373758 LCE3BQ5TA77 95 aa5.2□□□□□ -1.58
REEP3-201ENST00000373758 RYR2Q92736 4967 aa5.18□□□□□ -1.58
REEP3-201ENST00000373758 KRTAP4-8A0A0G2JLE6 195 aa5.17□□□□□ -1.58
REEP3-201ENST00000373758 KRTAP4-8Q9BYQ9 185 aa5.17□□□□□ -1.58
REEP3-201ENST00000373758 MT1GP13640 62 aa5.15□□□□□ -1.59
REEP3-201ENST00000373758 KMT2CQ8NEZ4 4911 aaKnown RBP5.14□□□□□ -1.59
REEP3-201ENST00000373758 LPAP08519 4548 aa5.11□□□□□ -1.59
REEP3-201ENST00000373758 KRTAP9-8Q9BYQ0 159 aa5.11□□□□□ -1.59
REEP3-201ENST00000373758 PKD1P98161 4303 aa5.1□□□□□ -1.59
REEP3-201ENST00000373758 HSPG2P98160 4391 aa5.08□□□□□ -1.6
REEP3-201ENST00000373758 HERC2O95714 4834 aa5.06□□□□□ -1.6
REEP3-201ENST00000373758 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
REEP3-201ENST00000373758 LCE2CQ5TA81 110 aa5.03□□□□□ -1.6
REEP3-201ENST00000373758 LCE3DQ9BYE3 92 aa4.98□□□□□ -1.61
REEP3-201ENST00000373758 SYNE1Q8NF91 8797 aaKnown RBP4.96□□□□□ -1.61
REEP3-201ENST00000373758 KRTAP9-3Q9BYQ3 159 aa4.95□□□□□ -1.62
REEP3-201ENST00000373758 KRTAP19-2Q3LHN2 52 aa4.93□□□□□ -1.62
REEP3-201ENST00000373758 LCE3EQ5T5B0 92 aa4.92□□□□□ -1.62
REEP3-201ENST00000373758 MUC17Q685J3 4493 aa4.87□□□□□ -1.63
REEP3-201ENST00000373758 PCLOQ9Y6V0 5065 aa4.86□□□□□ -1.63
REEP3-201ENST00000373758 MT1LQ93083 61 aa4.85□□□□□ -1.63
REEP3-201ENST00000373758 TNXBP22105 4242 aa4.84□□□□□ -1.63
REEP3-201ENST00000373758 PKHD1L1Q86WI1 4243 aa4.84□□□□□ -1.63
REEP3-201ENST00000373758 HERC1Q15751 4861 aa4.78□□□□□ -1.64
REEP3-201ENST00000373758 MT1EP04732 61 aa4.76□□□□□ -1.65
REEP3-201ENST00000373758 FLGP20930 4061 aaPredicted RBP4.74□□□□□ -1.65
REEP3-201ENST00000373758 PRM1P04553 51 aa4.72□□□□□ -1.65
REEP3-201ENST00000373758 LCE2BO14633 110 aa4.71□□□□□ -1.66
REEP3-201ENST00000373758 UBR4Q5T4S7 5183 aa4.71□□□□□ -1.66
REEP3-201ENST00000373758 KRTAP19-3Q7Z4W3 81 aa4.7□□□□□ -1.66
REEP3-201ENST00000373758 EPPK1P58107 5090 aaKnown RBP4.7□□□□□ -1.66
REEP3-201ENST00000373758 LOC100996750A0A140TA64 210 aa4.7□□□□□ -1.66
REEP3-201ENST00000373758 SPRR2EP22531 72 aa4.7□□□□□ -1.66
REEP3-201ENST00000373758 SPRR2BP35325 72 aa4.7□□□□□ -1.66
REEP3-201ENST00000373758 SPRR2AP35326 72 aa4.7□□□□□ -1.66
REEP3-201ENST00000373758 ABCA13Q86UQ4 5058 aa4.68□□□□□ -1.66
REEP3-201ENST00000373758 KRTAP2-3P0C7H8 128 aa4.62□□□□□ -1.67
REEP3-201ENST00000373758 KRTAP2-4Q9BYR9 128 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms