RNA–Protein interactions for RNA: ENST00000373201.5

PTPRT-207, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-207ENST00000373201 ZNF469Q96JG9 3925 aaPredicted RBP3.96□□□□□ -1.78
PTPRT-207ENST00000373201 LCE3AQ5TA76 89 aa3.93□□□□□ -1.78
PTPRT-207ENST00000373201 DNAH2Q9P225 4427 aa3.93□□□□□ -1.78
PTPRT-207ENST00000373201 ANK3Q12955 4377 aaKnown RBP3.93□□□□□ -1.78
PTPRT-207ENST00000373201 KRTAP4-5Q9BYR2 181 aa3.92□□□□□ -1.78
PTPRT-207ENST00000373201 ANK2Q01484 3957 aa3.89□□□□□ -1.79
PTPRT-207ENST00000373201 DNAH3Q8TD57 4116 aa3.89□□□□□ -1.79
PTPRT-207ENST00000373201 MT1HL1P0DM35 61 aa3.88□□□□□ -1.79
PTPRT-207ENST00000373201 HUWE1Q7Z6Z7 4374 aaKnown RBP3.88□□□□□ -1.79
PTPRT-207ENST00000373201 VPS13BQ7Z7G8 4022 aa3.86□□□□□ -1.79
PTPRT-207ENST00000373201 KMT2AQ03164 3969 aa3.86□□□□□ -1.79
PTPRT-207ENST00000373201 HECTD4Q9Y4D8 3996 aa3.85□□□□□ -1.79
PTPRT-207ENST00000373201 KRTAP3-3Q9BYR6 98 aa3.77□□□□□ -1.81
PTPRT-207ENST00000373201 KRTAP3-2Q9BYR7 98 aa3.77□□□□□ -1.81
PTPRT-207ENST00000373201 KRTAP10-7P60409 375 aaPredicted RBP3.76□□□□□ -1.81
PTPRT-207ENST00000373201 SPRR2FQ96RM1 72 aa3.76□□□□□ -1.81
PTPRT-207ENST00000373201 KRTAP23-1A1A580 65 aa3.72□□□□□ -1.81
PTPRT-207ENST00000373201 DNAH6Q9C0G6 4158 aa3.7□□□□□ -1.82
PTPRT-207ENST00000373201 FLGP20930 4061 aaPredicted RBP3.65□□□□□ -1.82
PTPRT-207ENST00000373201 FRAS1Q86XX4 4008 aa3.65□□□□□ -1.83
PTPRT-207ENST00000373201 DNAH10Q8IVF4 4471 aa3.63□□□□□ -1.83
PTPRT-207ENST00000373201 VPS13DQ5THJ4 4388 aa3.58□□□□□ -1.84
PTPRT-207ENST00000373201 SPRR2EP22531 72 aa3.58□□□□□ -1.84
PTPRT-207ENST00000373201 SPRR2BP35325 72 aa3.58□□□□□ -1.84
PTPRT-207ENST00000373201 SPRR2AP35326 72 aa3.58□□□□□ -1.84
PTPRT-207ENST00000373201 KRTAP10-4P60372 401 aaPredicted RBP3.56□□□□□ -1.84
PTPRT-207ENST00000373201 DNAH17Q9UFH2 4485 aa3.54□□□□□ -1.84
PTPRT-207ENST00000373201 KRTAP19-5Q3LI72 72 aa3.54□□□□□ -1.84
PTPRT-207ENST00000373201 PRKDCP78527 4128 aaKnown RBP3.53□□□□□ -1.84
PTPRT-207ENST00000373201 FAT2Q9NYQ8 4349 aa3.53□□□□□ -1.84
PTPRT-207ENST00000373201 MT1HP80294 61 aa3.53□□□□□ -1.84
PTPRT-207ENST00000373201 LCE3BQ5TA77 95 aa3.48□□□□□ -1.85
PTPRT-207ENST00000373201 DNAH9Q9NYC9 4486 aa3.47□□□□□ -1.85
PTPRT-207ENST00000373201 SPRR2DP22532 72 aa3.46□□□□□ -1.86
PTPRT-207ENST00000373201 DNAH11Q96DT5 4516 aa3.46□□□□□ -1.86
PTPRT-207ENST00000373201 PKHD1P08F94 4074 aa3.46□□□□□ -1.86
PTPRT-207ENST00000373201 LCE3CQ5T5A8 94 aa3.44□□□□□ -1.86
PTPRT-207ENST00000373201 MT2AP02795 61 aa3.42□□□□□ -1.86
PTPRT-207ENST00000373201 KRTAP4-1Q9BYQ7 146 aa3.41□□□□□ -1.86
PTPRT-207ENST00000373201 PKHD1L1Q86WI1 4243 aa3.41□□□□□ -1.86
PTPRT-207ENST00000373201 LCE2BO14633 110 aa3.39□□□□□ -1.87
PTPRT-207ENST00000373201 DYNC2H1Q8NCM8 4307 aaKnown RBP3.38□□□□□ -1.87
PTPRT-207ENST00000373201 KRTAP12-4P60329 112 aa3.38□□□□□ -1.87
PTPRT-207ENST00000373201 MT1FP04733 61 aa3.36□□□□□ -1.87
PTPRT-207ENST00000373201 SPRR2GQ9BYE4 73 aa3.35□□□□□ -1.87
PTPRT-207ENST00000373201 DNAH8Q96JB1 4490 aa3.32□□□□□ -1.88
PTPRT-207ENST00000373201 PLECQ15149 4684 aaKnown RBP3.31□□□□□ -1.88
PTPRT-207ENST00000373201 MT1GP13640 62 aa3.29□□□□□ -1.88
PTPRT-207ENST00000373201 LCE2CQ5TA81 110 aa3.26□□□□□ -1.89
PTPRT-207ENST00000373201 LRP1Q07954 4544 aaKnown RBP3.25□□□□□ -1.89
PTPRT-207ENST00000373201 DNAH5Q8TE73 4624 aa3.25□□□□□ -1.89
PTPRT-207ENST00000373201 FAT1Q14517 4588 aa3.2□□□□□ -1.9
PTPRT-207ENST00000373201 SPRR5A0A1B0GTR4 108 aa3.2□□□□□ -1.9
PTPRT-207ENST00000373201 LCE2DQ5TA82 110 aaPredicted RBP3.2□□□□□ -1.9
PTPRT-207ENST00000373201 STARD9Q9P2P6 4700 aa3.19□□□□□ -1.9
PTPRT-207ENST00000373201 APOBP04114 4563 aaKnown RBP3.17□□□□□ -1.9
PTPRT-207ENST00000373201 MT4P47944 62 aa3.16□□□□□ -1.9
PTPRT-207ENST00000373201 KRTAP19-4Q3LI73 84 aa3.15□□□□□ -1.9
PTPRT-207ENST00000373201 PKD1P98161 4303 aa3.15□□□□□ -1.91
PTPRT-207ENST00000373201 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
PTPRT-207ENST00000373201 LRP1BQ9NZR2 4599 aa3.12□□□□□ -1.91
PTPRT-207ENST00000373201 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
PTPRT-207ENST00000373201 SACSQ9NZJ4 4579 aa3.11□□□□□ -1.91
PTPRT-207ENST00000373201 DYNC1H1Q14204 4646 aaKnown RBP3.1□□□□□ -1.91
PTPRT-207ENST00000373201 KRTAP19-1Q8IUB9 90 aa3.1□□□□□ -1.91
PTPRT-207ENST00000373201 FAT3Q8TDW7 4589 aa3.06□□□□□ -1.92
PTPRT-207ENST00000373201 TNXBP22105 4242 aa3.05□□□□□ -1.92
PTPRT-207ENST00000373201 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
PTPRT-207ENST00000373201 KRTAP4-8A0A0G2JLE6 195 aa3.05□□□□□ -1.92
PTPRT-207ENST00000373201 MT1XP80297 61 aa3.05□□□□□ -1.92
PTPRT-207ENST00000373201 KRTAP4-8Q9BYQ9 185 aa3.05□□□□□ -1.92
PTPRT-207ENST00000373201 LCE1DQ5T752 114 aa3.02□□□□□ -1.93
PTPRT-207ENST00000373201 KRTAP19-8Q3LI54 63 aa2.99□□□□□ -1.93
PTPRT-207ENST00000373201 HSPG2P98160 4391 aa2.94□□□□□ -1.94
PTPRT-207ENST00000373201 KRTAP19-3Q7Z4W3 81 aa2.93□□□□□ -1.94
PTPRT-207ENST00000373201 PRM1P04553 51 aa2.89□□□□□ -1.95
PTPRT-207ENST00000373201 MT1BP07438 61 aa2.89□□□□□ -1.95
PTPRT-207ENST00000373201 MYCBP2O75592 4640 aa2.88□□□□□ -1.95
PTPRT-207ENST00000373201 LCE5AQ5TCM9 118 aa2.88□□□□□ -1.95
PTPRT-207ENST00000373201 KRTAP9-2Q9BYQ4 174 aa2.87□□□□□ -1.95
PTPRT-207ENST00000373201 KRTAP9-8Q9BYQ0 159 aa2.86□□□□□ -1.95
PTPRT-207ENST00000373201 RYR3Q15413 4870 aa2.86□□□□□ -1.95
PTPRT-207ENST00000373201 MT3P25713 68 aa2.86□□□□□ -1.95
PTPRT-207ENST00000373201 KRTAP4-7Q9BYR0 210 aa2.86□□□□□ -1.95
PTPRT-207ENST00000373201 DNHD1Q96M86 4753 aa2.85□□□□□ -1.95
PTPRT-207ENST00000373201 KRTAP17-1Q9BYP8 105 aa2.85□□□□□ -1.95
PTPRT-207ENST00000373201 RYR1P21817 5038 aa2.84□□□□□ -1.96
PTPRT-207ENST00000373201 KRTAP9-3Q9BYQ3 159 aa2.83□□□□□ -1.96
PTPRT-207ENST00000373201 MT1LQ93083 61 aa2.8□□□□□ -1.96
PTPRT-207ENST00000373201 LOC100996750A0A140TA64 210 aa2.8□□□□□ -1.96
PTPRT-207ENST00000373201 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
PTPRT-207ENST00000373201 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
PTPRT-207ENST00000373201 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
PTPRT-207ENST00000373201 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
PTPRT-207ENST00000373201 LCE1AQ5T7P2 110 aa2.78□□□□□ -1.96
PTPRT-207ENST00000373201 MT1EP04732 61 aa2.77□□□□□ -1.97
PTPRT-207ENST00000373201 KRTAP19-6Q3LI70 58 aa2.75□□□□□ -1.97
PTPRT-207ENST00000373201 LPAP08519 4548 aa2.75□□□□□ -1.97
PTPRT-207ENST00000373201 MT1MQ8N339 61 aa2.74□□□□□ -1.97
PTPRT-207ENST00000373201 KRTAP9-6A0A140TA67 174 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms