RNA–Protein interactions for RNA: ENST00000372988.8

CCND3-202, Transcript of cyclin D3, humanhuman

TSL 1 (best) BASIC

Gene CCND3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-202ENST00000372988 KRTAP10-4P60372 401 aaPredicted RBP12.26□□□□□ -0.45
CCND3-202ENST00000372988 FAT1Q14517 4588 aa12.25□□□□□ -0.45
CCND3-202ENST00000372988 A0A0D9SG42 100 aa12.25□□□□□ -0.45
CCND3-202ENST00000372988 SPINT4Q6UDR6 99 aa12.16□□□□□ -0.46
CCND3-202ENST00000372988 FAT3Q8TDW7 4589 aa12.14□□□□□ -0.47
CCND3-202ENST00000372988 C10orf95Q9H7T3 257 aa12.11□□□□□ -0.47
CCND3-202ENST00000372988 S4R3F8 94 aa12.09□□□□□ -0.47
CCND3-202ENST00000372988 LRP1Q07954 4544 aaKnown RBP12.05□□□□□ -0.48
CCND3-202ENST00000372988 KRTAP10-8P60410 259 aa12.04□□□□□ -0.48
CCND3-202ENST00000372988 KRTAP15-1Q3LI76 137 aa12.04□□□□□ -0.48
CCND3-202ENST00000372988 HSPG2P98160 4391 aa12□□□□□ -0.49
CCND3-202ENST00000372988 KRTAP12-2P59991 146 aa12□□□□□ -0.49
CCND3-202ENST00000372988 DMBT1Q9UGM3 2413 aaPredicted RBP12□□□□□ -0.49
CCND3-202ENST00000372988 TNXBP22105 4242 aa12□□□□□ -0.49
CCND3-202ENST00000372988 A0A1B0GVY2 172 aa11.95□□□□□ -0.5
CCND3-202ENST00000372988 KRTAP12-1P59990 96 aa11.89□□□□□ -0.51
CCND3-202ENST00000372988 XP32Q5T750 250 aa11.86□□□□□ -0.51
CCND3-202ENST00000372988 NDUFAF8A1L188 74 aa11.86□□□□□ -0.51
CCND3-202ENST00000372988 KRTAP21-3Q3LHN1 58 aa11.8□□□□□ -0.52
CCND3-202ENST00000372988 MYCBP2O75592 4640 aa11.68□□□□□ -0.54
CCND3-202ENST00000372988 M0QZ58 72 aa11.66□□□□□ -0.54
CCND3-202ENST00000372988 RYR2Q92736 4967 aa11.53□□□□□ -0.56
CCND3-202ENST00000372988 LPAP08519 4548 aa11.45□□□□□ -0.58
CCND3-202ENST00000372988 Q5VSD8 79 aa11.42□□□□□ -0.58
CCND3-202ENST00000372988 KMT2CQ8NEZ4 4911 aaKnown RBP11.4□□□□□ -0.58
CCND3-202ENST00000372988 MT1HL1P0DM35 61 aa11.27□□□□□ -0.61
CCND3-202ENST00000372988 LRP2P98164 4655 aa11.26□□□□□ -0.61
CCND3-202ENST00000372988 R4GN34 69 aa11.22□□□□□ -0.61
CCND3-202ENST00000372988 RYR1P21817 5038 aa11.21□□□□□ -0.61
CCND3-202ENST00000372988 PLAC4Q8WY50 150 aa11.21□□□□□ -0.62
CCND3-202ENST00000372988 KRTAP17-1Q9BYP8 105 aa11.18□□□□□ -0.62
CCND3-202ENST00000372988 LORP23490 312 aaPredicted RBP11.05□□□□□ -0.64
CCND3-202ENST00000372988 PP632Q6XCG6 107 aa10.9□□□□□ -0.67
CCND3-202ENST00000372988 MUC17Q685J3 4493 aa10.89□□□□□ -0.67
CCND3-202ENST00000372988 RYR3Q15413 4870 aa10.86□□□□□ -0.67
CCND3-202ENST00000372988 KIAA1109Q2LD37 5005 aa10.84□□□□□ -0.67
CCND3-202ENST00000372988 LUZP6Q538Z0 58 aa10.79□□□□□ -0.68
CCND3-202ENST00000372988 ABCA13Q86UQ4 5058 aa10.73□□□□□ -0.69
CCND3-202ENST00000372988 SEC61BP60468 96 aaKnown RBP10.7□□□□□ -0.7
CCND3-202ENST00000372988 CAMK2N1Q7Z7J9 78 aa10.7□□□□□ -0.7
CCND3-202ENST00000372988 A0A0A0MQY5 61 aa10.67□□□□□ -0.7
CCND3-202ENST00000372988 KRTAP4-1Q9BYQ7 146 aa10.66□□□□□ -0.7
CCND3-202ENST00000372988 KRTAP19-2Q3LHN2 52 aa10.61□□□□□ -0.71
CCND3-202ENST00000372988 KRTAP23-1A1A580 65 aa10.45□□□□□ -0.74
CCND3-202ENST00000372988 SPRR5A0A1B0GTR4 108 aa10.43□□□□□ -0.74
CCND3-202ENST00000372988 TNP1P09430 55 aa10.4□□□□□ -0.74
CCND3-202ENST00000372988 KRTAP4-5Q9BYR2 181 aa10.36□□□□□ -0.75
CCND3-202ENST00000372988 EPPK1P58107 5090 aaKnown RBP10.35□□□□□ -0.75
CCND3-202ENST00000372988 FLGP20930 4061 aaPredicted RBP10.33□□□□□ -0.76
CCND3-202ENST00000372988 HERC1Q15751 4861 aa10.29□□□□□ -0.76
CCND3-202ENST00000372988 J3QL48 77 aa10.01□□□□□ -0.81
CCND3-202ENST00000372988 MUC2Q02817 5179 aa10.01□□□□□ -0.81
CCND3-202ENST00000372988 BIRC6Q9NR09 4857 aa9.98□□□□□ -0.81
CCND3-202ENST00000372988 PCLOQ9Y6V0 5065 aa9.92□□□□□ -0.82
CCND3-202ENST00000372988 SPRR2GQ9BYE4 73 aa9.89□□□□□ -0.83
CCND3-202ENST00000372988 HERC2O95714 4834 aa9.88□□□□□ -0.83
CCND3-202ENST00000372988 LCE3AQ5TA76 89 aa9.83□□□□□ -0.84
CCND3-202ENST00000372988 KRTAP19-1Q8IUB9 90 aa9.82□□□□□ -0.84
CCND3-202ENST00000372988 LCE2CQ5TA81 110 aa9.71□□□□□ -0.86
CCND3-202ENST00000372988 PRO2289Q9P1D8 64 aa9.7□□□□□ -0.86
CCND3-202ENST00000372988 KRTAP8-1Q8IUC2 63 aa9.61□□□□□ -0.87
CCND3-202ENST00000372988 INE1O15225 51 aa9.55□□□□□ -0.88
CCND3-202ENST00000372988 FAT4Q6V0I7 4981 aa9.52□□□□□ -0.88
CCND3-202ENST00000372988 HMCN2Q8NDA2 5059 aa9.46□□□□□ -0.89
CCND3-202ENST00000372988 MT1FP04733 61 aa9.4□□□□□ -0.9
CCND3-202ENST00000372988 M0R2T5 61 aa9.38□□□□□ -0.91
CCND3-202ENST00000372988 MT2AP02795 61 aa9.38□□□□□ -0.91
CCND3-202ENST00000372988 KRTAP19-8Q3LI54 63 aa9.37□□□□□ -0.91
CCND3-202ENST00000372988 MT1HP80294 61 aa9.37□□□□□ -0.91
CCND3-202ENST00000372988 KRTAP10-10P60014 251 aa9.34□□□□□ -0.91
CCND3-202ENST00000372988 KRTAP10-5P60370 271 aa9.32□□□□□ -0.92
CCND3-202ENST00000372988 KRTAP12-3P60328 96 aa9.32□□□□□ -0.92
CCND3-202ENST00000372988 UBR4Q5T4S7 5183 aa9.32□□□□□ -0.92
CCND3-202ENST00000372988 MT1XP80297 61 aa9.29□□□□□ -0.92
CCND3-202ENST00000372988 KRTAP9-8Q9BYQ0 159 aa9.26□□□□□ -0.93
CCND3-202ENST00000372988 KRTAP10-12P60413 245 aa9.25□□□□□ -0.93
CCND3-202ENST00000372988 MT1BP07438 61 aa9.23□□□□□ -0.93
CCND3-202ENST00000372988 RNF213Q63HN8 5207 aa9.1□□□□□ -0.95
CCND3-202ENST00000372988 KRTAP10-7P60409 375 aaPredicted RBP9.07□□□□□ -0.96
CCND3-202ENST00000372988 KRTAP9-3Q9BYQ3 159 aa8.84□□□□□ -0.99
CCND3-202ENST00000372988 LCE3CQ5T5A8 94 aa8.83□□□□□ -1
CCND3-202ENST00000372988 KRTAP19-5Q3LI72 72 aa8.77□□□□□ -1.01
CCND3-202ENST00000372988 KRTAP9-6A8MVA2 160 aa8.59□□□□□ -1.03
CCND3-202ENST00000372988 KRTAP2-3P0C7H8 128 aa8.49□□□□□ -1.05
CCND3-202ENST00000372988 KRTAP2-4Q9BYR9 128 aa8.49□□□□□ -1.05
CCND3-202ENST00000372988 KRTAP2-1Q9BYU5 128 aa8.49□□□□□ -1.05
CCND3-202ENST00000372988 LCE2BO14633 110 aa8.4□□□□□ -1.06
CCND3-202ENST00000372988 KMT2DO14686 5537 aa8.38□□□□□ -1.07
CCND3-202ENST00000372988 KRTAP4-8A0A0G2JLE6 195 aa8.36□□□□□ -1.07
CCND3-202ENST00000372988 KRTAP4-8Q9BYQ9 185 aa8.36□□□□□ -1.07
CCND3-202ENST00000372988 KRTAP19-7Q3SYF9 63 aa8.28□□□□□ -1.08
CCND3-202ENST00000372988 KRTAP4-7Q9BYR0 210 aa8.25□□□□□ -1.09
CCND3-202ENST00000372988 KRTAP19-4Q3LI73 84 aa8.18□□□□□ -1.1
CCND3-202ENST00000372988 USH2AO75445 5202 aa8.17□□□□□ -1.1
CCND3-202ENST00000372988 MT1LQ93083 61 aa8.07□□□□□ -1.12
CCND3-202ENST00000372988 MT1EP04732 61 aa7.99□□□□□ -1.13
CCND3-202ENST00000372988 LCE2AQ5TA79 106 aaPredicted RBP7.82□□□□□ -1.16
CCND3-202ENST00000372988 LOC100996750A0A140TA64 210 aa7.67□□□□□ -1.18
CCND3-202ENST00000372988 SSPOA2VEC9 5147 aa7.62□□□□□ -1.19
CCND3-202ENST00000372988 KRTAP4-3Q9BYR4 195 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms