RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 DNAH5Q8TE73 4624 aa2.6□□□□□ -1.99
SMNDC1-202ENST00000369603 CMYA5Q8N3K9 4069 aa2.6□□□□□ -1.99
SMNDC1-202ENST00000369603 DNAH11Q96DT5 4516 aa2.59□□□□□ -1.99
SMNDC1-202ENST00000369603 TNP1P09430 55 aa2.58□□□□□ -2
SMNDC1-202ENST00000369603 DYNC2H1Q8NCM8 4307 aaKnown RBP2.57□□□□□ -2
SMNDC1-202ENST00000369603 KRTAP4-5Q9BYR2 181 aa2.56□□□□□ -2
SMNDC1-202ENST00000369603 PP632Q6XCG6 107 aa2.56□□□□□ -2
SMNDC1-202ENST00000369603 KRTAP12-2P59991 146 aa2.56□□□□□ -2
SMNDC1-202ENST00000369603 KRTAP10-6P60371 365 aaPredicted RBP2.56□□□□□ -2
SMNDC1-202ENST00000369603 KRTAP13-4Q3LI77 160 aa2.56□□□□□ -2
SMNDC1-202ENST00000369603 DNAH2Q9P225 4427 aa2.56□□□□□ -2
SMNDC1-202ENST00000369603 DYNC1H1Q14204 4646 aaKnown RBP2.54□□□□□ -2
SMNDC1-202ENST00000369603 DNAH6Q9C0G6 4158 aa2.54□□□□□ -2
SMNDC1-202ENST00000369603 KRTAP10-10P60014 251 aa2.54□□□□□ -2
SMNDC1-202ENST00000369603 LRP1BQ9NZR2 4599 aa2.53□□□□□ -2
SMNDC1-202ENST00000369603 KMT2AQ03164 3969 aa2.53□□□□□ -2.01
SMNDC1-202ENST00000369603 KRTAP12-1P59990 96 aa2.52□□□□□ -2.01
SMNDC1-202ENST00000369603 FAT2Q9NYQ8 4349 aa2.5□□□□□ -2.01
SMNDC1-202ENST00000369603 DNAH8Q96JB1 4490 aa2.5□□□□□ -2.01
SMNDC1-202ENST00000369603 DNAH7Q8WXX0 4024 aa2.49□□□□□ -2.01
SMNDC1-202ENST00000369603 KRTAP15-1Q3LI76 137 aa2.48□□□□□ -2.01
SMNDC1-202ENST00000369603 FAT1Q14517 4588 aa2.48□□□□□ -2.01
SMNDC1-202ENST00000369603 SACSQ9NZJ4 4579 aa2.47□□□□□ -2.01
SMNDC1-202ENST00000369603 PRO2289Q9P1D8 64 aa2.46□□□□□ -2.01
SMNDC1-202ENST00000369603 HECTD4Q9Y4D8 3996 aa2.45□□□□□ -2.02
SMNDC1-202ENST00000369603 VPS13BQ7Z7G8 4022 aa2.45□□□□□ -2.02
SMNDC1-202ENST00000369603 LYSTQ99698 3801 aa2.43□□□□□ -2.02
SMNDC1-202ENST00000369603 RYR2Q92736 4967 aa2.42□□□□□ -2.02
SMNDC1-202ENST00000369603 RYR1P21817 5038 aa2.4□□□□□ -2.02
SMNDC1-202ENST00000369603 KIAA1109Q2LD37 5005 aa2.4□□□□□ -2.03
SMNDC1-202ENST00000369603 HYDINQ4G0P3 5121 aa2.39□□□□□ -2.03
SMNDC1-202ENST00000369603 APOBP04114 4563 aaKnown RBP2.39□□□□□ -2.03
SMNDC1-202ENST00000369603 FRAS1Q86XX4 4008 aa2.38□□□□□ -2.03
SMNDC1-202ENST00000369603 RYR3Q15413 4870 aa2.38□□□□□ -2.03
SMNDC1-202ENST00000369603 LOC100996750A0A140TA64 210 aa2.38□□□□□ -2.03
SMNDC1-202ENST00000369603 KRTAP4-6Q9BYQ5 205 aa2.38□□□□□ -2.03
SMNDC1-202ENST00000369603 KRTAP4-1Q9BYQ7 146 aa2.37□□□□□ -2.03
SMNDC1-202ENST00000369603 KRTAP9-6A0A140TA67 174 aa2.36□□□□□ -2.03
SMNDC1-202ENST00000369603 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
SMNDC1-202ENST00000369603 LCE2BO14633 110 aa2.35□□□□□ -2.03
SMNDC1-202ENST00000369603 PKD1P98161 4303 aa2.34□□□□□ -2.04
SMNDC1-202ENST00000369603 LORP23490 312 aaPredicted RBP2.33□□□□□ -2.04
SMNDC1-202ENST00000369603 PKHD1P08F94 4074 aa2.33□□□□□ -2.04
SMNDC1-202ENST00000369603 LRP1Q07954 4544 aaKnown RBP2.32□□□□□ -2.04
SMNDC1-202ENST00000369603 KRTAP23-1A1A580 65 aa2.31□□□□□ -2.04
SMNDC1-202ENST00000369603 HSPG2P98160 4391 aa2.3□□□□□ -2.04
SMNDC1-202ENST00000369603 FAT3Q8TDW7 4589 aa2.3□□□□□ -2.04
SMNDC1-202ENST00000369603 MYCBP2O75592 4640 aa2.29□□□□□ -2.04
SMNDC1-202ENST00000369603 MT1HP80294 61 aa2.28□□□□□ -2.04
SMNDC1-202ENST00000369603 KMT2CQ8NEZ4 4911 aaKnown RBP2.27□□□□□ -2.05
SMNDC1-202ENST00000369603 SPRR2GQ9BYE4 73 aa2.26□□□□□ -2.05
SMNDC1-202ENST00000369603 BIRC6Q9NR09 4857 aa2.26□□□□□ -2.05
SMNDC1-202ENST00000369603 HERC2O95714 4834 aa2.26□□□□□ -2.05
SMNDC1-202ENST00000369603 KRTAP19-4Q3LI73 84 aa2.25□□□□□ -2.05
SMNDC1-202ENST00000369603 KRTAP10-12P60413 245 aa2.24□□□□□ -2.05
SMNDC1-202ENST00000369603 PKHD1L1Q86WI1 4243 aa2.24□□□□□ -2.05
SMNDC1-202ENST00000369603 MT2AP02795 61 aa2.24□□□□□ -2.05
SMNDC1-202ENST00000369603 LCE2CQ5TA81 110 aa2.21□□□□□ -2.06
SMNDC1-202ENST00000369603 TNXBP22105 4242 aa2.2□□□□□ -2.06
SMNDC1-202ENST00000369603 MT1FP04733 61 aa2.2□□□□□ -2.06
SMNDC1-202ENST00000369603 LRP2P98164 4655 aa2.2□□□□□ -2.06
SMNDC1-202ENST00000369603 KRTAP12-3P60328 96 aa2.18□□□□□ -2.06
SMNDC1-202ENST00000369603 LCE3AQ5TA76 89 aa2.18□□□□□ -2.06
SMNDC1-202ENST00000369603 EPPK1P58107 5090 aaKnown RBP2.16□□□□□ -2.06
SMNDC1-202ENST00000369603 HERC1Q15751 4861 aa2.16□□□□□ -2.06
SMNDC1-202ENST00000369603 LCE2AQ5TA79 106 aaPredicted RBP2.15□□□□□ -2.06
SMNDC1-202ENST00000369603 KRTAP19-1Q8IUB9 90 aa2.15□□□□□ -2.06
SMNDC1-202ENST00000369603 INE1O15225 51 aa2.15□□□□□ -2.07
SMNDC1-202ENST00000369603 KRTAP19-8Q3LI54 63 aa2.15□□□□□ -2.07
SMNDC1-202ENST00000369603 KRTAP19-2Q3LHN2 52 aa2.15□□□□□ -2.07
SMNDC1-202ENST00000369603 ABCA13Q86UQ4 5058 aa2.13□□□□□ -2.07
SMNDC1-202ENST00000369603 KRTAP9-8Q9BYQ0 159 aa2.12□□□□□ -2.07
SMNDC1-202ENST00000369603 LPAP08519 4548 aa2.1□□□□□ -2.07
SMNDC1-202ENST00000369603 PCLOQ9Y6V0 5065 aa2.09□□□□□ -2.08
SMNDC1-202ENST00000369603 KRTAP8-1Q8IUC2 63 aa2.08□□□□□ -2.08
SMNDC1-202ENST00000369603 MT1BP07438 61 aa2.06□□□□□ -2.08
SMNDC1-202ENST00000369603 LCE3BQ5TA77 95 aa2.06□□□□□ -2.08
SMNDC1-202ENST00000369603 FLGP20930 4061 aaPredicted RBP2.06□□□□□ -2.08
SMNDC1-202ENST00000369603 KRTAP9-3Q9BYQ3 159 aa2.05□□□□□ -2.08
SMNDC1-202ENST00000369603 MUC17Q685J3 4493 aa2.05□□□□□ -2.08
SMNDC1-202ENST00000369603 MT1XP80297 61 aa2.05□□□□□ -2.08
SMNDC1-202ENST00000369603 KRTAP10-5P60370 271 aa2.03□□□□□ -2.08
SMNDC1-202ENST00000369603 SPRR5A0A1B0GTR4 108 aa2.02□□□□□ -2.09
SMNDC1-202ENST00000369603 KRTAP10-7P60409 375 aaPredicted RBP2□□□□□ -2.09
SMNDC1-202ENST00000369603 KRTAP19-5Q3LI72 72 aa2□□□□□ -2.09
SMNDC1-202ENST00000369603 HMCN2Q8NDA2 5059 aa1.98□□□□□ -2.09
SMNDC1-202ENST00000369603 KRTAP9-7A8MTY7 169 aa1.98□□□□□ -2.09
SMNDC1-202ENST00000369603 CRCT1Q9UGL9 99 aa1.98□□□□□ -2.09
SMNDC1-202ENST00000369603 RNF213Q63HN8 5207 aa1.97□□□□□ -2.09
SMNDC1-202ENST00000369603 LCE3CQ5T5A8 94 aa1.97□□□□□ -2.09
SMNDC1-202ENST00000369603 FAT4Q6V0I7 4981 aa1.95□□□□□ -2.1
SMNDC1-202ENST00000369603 KRTAP9-2Q9BYQ4 174 aa1.95□□□□□ -2.1
SMNDC1-202ENST00000369603 KRTAP5-3Q6L8H2 238 aa1.93□□□□□ -2.1
SMNDC1-202ENST00000369603 SPRR2FQ96RM1 72 aa1.91□□□□□ -2.1
SMNDC1-202ENST00000369603 KRTAP4-8Q9BYQ9 185 aa1.9□□□□□ -2.11
SMNDC1-202ENST00000369603 KRTAP4-8A0A0G2JLE6 195 aa1.89□□□□□ -2.11
SMNDC1-202ENST00000369603 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.89□□□□□ -2.11
SMNDC1-202ENST00000369603 UBR4Q5T4S7 5183 aa1.88□□□□□ -2.11
SMNDC1-202ENST00000369603 KRTAP19-6Q3LI70 58 aa1.87□□□□□ -2.11
SMNDC1-202ENST00000369603 MUC2Q02817 5179 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms