RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 ENHOQ6UWT2 76 aa-1.73□□□□□ -2.69
ECHDC1-201ENST00000368287 C6orf48Q9UBA6 75 aa-1.73□□□□□ -2.69
ECHDC1-201ENST00000368287 CSMD2Q7Z408 3487 aa-1.73□□□□□ -2.69
ECHDC1-201ENST00000368287 INO80Q9ULG1 1556 aaPredicted RBP-1.73□□□□□ -2.69
ECHDC1-201ENST00000368287 FCER1GP30273 86 aa-1.74□□□□□ -2.69
ECHDC1-201ENST00000368287 CFAP74Q9C0B2 1584 aa-1.74□□□□□ -2.69
ECHDC1-201ENST00000368287 NHSQ6T4R5 1651 aa-1.74□□□□□ -2.69
ECHDC1-201ENST00000368287 SFTA3P0C7M3 94 aa-1.75□□□□□ -2.69
ECHDC1-201ENST00000368287 SPART-AS1P0CW21 52 aa-1.75□□□□□ -2.69
ECHDC1-201ENST00000368287 NCBP2-AS2Q69YL0 99 aa-1.75□□□□□ -2.69
ECHDC1-201ENST00000368287 LMTK2Q8IWU2 1503 aa-1.76□□□□□ -2.69
ECHDC1-201ENST00000368287 SMARCA2P51531 1590 aa-1.76□□□□□ -2.69
ECHDC1-201ENST00000368287 RB1CC1Q8TDY2 1594 aa-1.76□□□□□ -2.69
ECHDC1-201ENST00000368287 A8MTW9 85 aa-1.77□□□□□ -2.69
ECHDC1-201ENST00000368287 C18orf32Q8TCD1 76 aa-1.77□□□□□ -2.69
ECHDC1-201ENST00000368287 A0A1B0GUL6 1792 aa-1.77□□□□□ -2.69
ECHDC1-201ENST00000368287 ETDCA0A1B0GVM5 59 aa-1.78□□□□□ -2.69
ECHDC1-201ENST00000368287 CCDC18Q5T9S5 1454 aa-1.8□□□□□ -2.7
ECHDC1-201ENST00000368287 H3BVH4 76 aa-1.8□□□□□ -2.7
ECHDC1-201ENST00000368287 BOD1L1Q8NFC6 3051 aa-1.82□□□□□ -2.7
ECHDC1-201ENST00000368287 FREM2Q5SZK8 3169 aa-1.82□□□□□ -2.7
ECHDC1-201ENST00000368287 PRUNE2Q8WUY3 3088 aa-1.83□□□□□ -2.7
ECHDC1-201ENST00000368287 DIP2AQ14689 1571 aa-1.83□□□□□ -2.7
ECHDC1-201ENST00000368287 MYO5CQ9NQX4 1742 aa-1.83□□□□□ -2.7
ECHDC1-201ENST00000368287 ABCA8O94911 1581 aa-1.84□□□□□ -2.7
ECHDC1-201ENST00000368287 DNMBPQ6XZF7 1577 aa-1.85□□□□□ -2.71
ECHDC1-201ENST00000368287 ASXL1Q8IXJ9 1541 aa-1.86□□□□□ -2.71
ECHDC1-201ENST00000368287 ANKARQ7Z5J8 1434 aa-1.86□□□□□ -2.71
ECHDC1-201ENST00000368287 DEFB114Q30KQ6 69 aa-1.87□□□□□ -2.71
ECHDC1-201ENST00000368287 CFAP54Q96N23 3096 aa-1.87□□□□□ -2.71
ECHDC1-201ENST00000368287 ZFHX4Q86UP3 3567 aa-1.87□□□□□ -2.71
ECHDC1-201ENST00000368287 CLASP1Q7Z460 1538 aa-1.87□□□□□ -2.71
ECHDC1-201ENST00000368287 CRYBG3Q68DQ2 2970 aa-1.87□□□□□ -2.71
ECHDC1-201ENST00000368287 RPS29P62273 56 aaKnown RBP-1.88□□□□□ -2.71
ECHDC1-201ENST00000368287 ABCC6O95255 1503 aa-1.88□□□□□ -2.71
ECHDC1-201ENST00000368287 DEFB136Q30KP8 78 aa-1.89□□□□□ -2.71
ECHDC1-201ENST00000368287 LEAP2Q969E1 77 aa-1.89□□□□□ -2.71
ECHDC1-201ENST00000368287 ABRACLQ9P1F3 81 aa-1.89□□□□□ -2.71
ECHDC1-201ENST00000368287 C3P01024 1663 aa-1.9□□□□□ -2.71
ECHDC1-201ENST00000368287 RRBP1Q9P2E9 1410 aaKnown RBP-1.91□□□□□ -2.72
ECHDC1-201ENST00000368287 MT1FP04733 61 aa-1.92□□□□□ -2.72
ECHDC1-201ENST00000368287 KAAG1Q9UBP8 84 aa-1.92□□□□□ -2.72
ECHDC1-201ENST00000368287 PREX2Q70Z35 1606 aa-1.92□□□□□ -2.72
ECHDC1-201ENST00000368287 MROH1Q8NDA8 1641 aa-1.92□□□□□ -2.72
ECHDC1-201ENST00000368287 MYO15AQ9UKN7 3530 aa-1.94□□□□□ -2.72
ECHDC1-201ENST00000368287 HILPDAQ9Y5L2 63 aa-1.94□□□□□ -2.72
ECHDC1-201ENST00000368287 CROCC2H7BZ55 1655 aa-1.95□□□□□ -2.72
ECHDC1-201ENST00000368287 IQGAP3Q86VI3 1631 aa-1.95□□□□□ -2.72
ECHDC1-201ENST00000368287 FAM208AQ9UK61 1670 aaKnown RBP-1.96□□□□□ -2.72
ECHDC1-201ENST00000368287 GLI2P10070 1586 aa-1.96□□□□□ -2.72
ECHDC1-201ENST00000368287 ATXN8Q156A1 80 aa-1.96□□□□□ -2.72
ECHDC1-201ENST00000368287 KIF21BO75037 1637 aa-1.96□□□□□ -2.72
ECHDC1-201ENST00000368287 VPS13CQ709C8 3753 aa-1.97□□□□□ -2.72
ECHDC1-201ENST00000368287 TIAM1Q13009 1591 aa-1.98□□□□□ -2.73
ECHDC1-201ENST00000368287 SMIM27A0A1W2PRY6 76 aa-1.98□□□□□ -2.73
ECHDC1-201ENST00000368287 KRTAP19-6Q3LI70 58 aa-1.98□□□□□ -2.73
ECHDC1-201ENST00000368287 ABCA9Q8IUA7 1624 aa-2□□□□□ -2.73
ECHDC1-201ENST00000368287 MADDQ8WXG6 1647 aa-2□□□□□ -2.73
ECHDC1-201ENST00000368287 K7EMI3 77 aa-2.02□□□□□ -2.73
ECHDC1-201ENST00000368287 WFDC10BQ8IUB3 73 aa-2.03□□□□□ -2.73
ECHDC1-201ENST00000368287 TMEM167BQ9NRX6 74 aa-2.04□□□□□ -2.74
ECHDC1-201ENST00000368287 WDFY3Q8IZQ1 3526 aa-2.04□□□□□ -2.74
ECHDC1-201ENST00000368287 POLR2KP53803 58 aaKnown RBP-2.05□□□□□ -2.74
ECHDC1-201ENST00000368287 LINC00308Q8TCZ7 52 aa-2.05□□□□□ -2.74
ECHDC1-201ENST00000368287 SPEGQ15772 3267 aa-2.06□□□□□ -2.74
ECHDC1-201ENST00000368287 GNG13Q9P2W3 67 aa-2.06□□□□□ -2.74
ECHDC1-201ENST00000368287 UGGT2Q9NYU1 1516 aa-2.07□□□□□ -2.74
ECHDC1-201ENST00000368287 FRYLO94915 3013 aa-2.07□□□□□ -2.74
ECHDC1-201ENST00000368287 PCNTO95613 3336 aa-2.07□□□□□ -2.74
ECHDC1-201ENST00000368287 DMDP11532 3685 aa-2.09□□□□□ -2.74
ECHDC1-201ENST00000368287 M0R1W7 72 aa-2.1□□□□□ -2.75
ECHDC1-201ENST00000368287 ALS2Q96Q42 1657 aa-2.11□□□□□ -2.75
ECHDC1-201ENST00000368287 DEFB131AP59861 70 aa-2.11□□□□□ -2.75
ECHDC1-201ENST00000368287 NMES1Q9C002 83 aa-2.11□□□□□ -2.75
ECHDC1-201ENST00000368287 SERF2P84101 59 aa-2.12□□□□□ -2.75
ECHDC1-201ENST00000368287 DUOX2Q9NRD8 1548 aa-2.12□□□□□ -2.75
ECHDC1-201ENST00000368287 LINC01549A6NIU2 74 aa-2.13□□□□□ -2.75
ECHDC1-201ENST00000368287 EEA1Q15075 1411 aa-2.14□□□□□ -2.75
ECHDC1-201ENST00000368287 CEP350Q5VT06 3117 aa-2.14□□□□□ -2.75
ECHDC1-201ENST00000368287 CENPEQ02224 2701 aa-2.14□□□□□ -2.75
ECHDC1-201ENST00000368287 EFCAB6Q5THR3 1501 aa-2.15□□□□□ -2.75
ECHDC1-201ENST00000368287 SZT2Q5T011 3432 aa-2.19□□□□□ -2.76
ECHDC1-201ENST00000368287 IGIPA6NJ69 53 aa-2.19□□□□□ -2.76
ECHDC1-201ENST00000368287 CEP250Q9BV73 2442 aa-2.19□□□□□ -2.76
ECHDC1-201ENST00000368287 S100ZQ8WXG8 99 aa-2.2□□□□□ -2.76
ECHDC1-201ENST00000368287 ABCA6Q8N139 1617 aa-2.2□□□□□ -2.76
ECHDC1-201ENST00000368287 SMCO4Q9NRQ5 59 aa-2.21□□□□□ -2.76
ECHDC1-201ENST00000368287 H0YGX0 51 aa-2.22□□□□□ -2.76
ECHDC1-201ENST00000368287 MROH2AA6NES4 1674 aa-2.23□□□□□ -2.77
ECHDC1-201ENST00000368287 PDCD5O14737 125 aa-2.24□□□□□ -2.77
ECHDC1-201ENST00000368287 SYCP2Q9BX26 1530 aa-2.26□□□□□ -2.77
ECHDC1-201ENST00000368287 EP400Q96L91 3159 aa-2.26□□□□□ -2.77
ECHDC1-201ENST00000368287 UGGT1Q9NYU2 1555 aa-2.27□□□□□ -2.77
ECHDC1-201ENST00000368287 LMO7Q8WWI1 1683 aa-2.27□□□□□ -2.77
ECHDC1-201ENST00000368287 CCDC180Q9P1Z9 1646 aa-2.28□□□□□ -2.77
ECHDC1-201ENST00000368287 MUC3AQ02505 3323 aa-2.3□□□□□ -2.78
ECHDC1-201ENST00000368287 TFF3Q07654 80 aa-2.3□□□□□ -2.78
ECHDC1-201ENST00000368287 WDFY4Q6ZS81 3184 aa-2.31□□□□□ -2.78
ECHDC1-201ENST00000368287 TTTY10Q9BZA0 68 aa-2.31□□□□□ -2.78
ECHDC1-201ENST00000368287 SCRIBQ14160 1630 aa-2.31□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms