RNA–Protein interactions for RNA: ENST00000368205.7

PTPRK-202, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 662 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-202ENST00000368205 VPS13DQ5THJ4 4388 aa1.83□□□□□ -2.12
PTPRK-202ENST00000368205 STAB1Q9NY15 2570 aa1.83□□□□□ -2.12
PTPRK-202ENST00000368205 ACYP2P14621 99 aa1.82□□□□□ -2.12
PTPRK-202ENST00000368205 C7orf65Q6ZTY9 151 aa1.82□□□□□ -2.12
PTPRK-202ENST00000368205 FBN3Q75N90 2809 aa1.82□□□□□ -2.12
PTPRK-202ENST00000368205 C8orf87E5RJ46 101 aa1.81□□□□□ -2.12
PTPRK-202ENST00000368205 IGLV7-43P04211 117 aa1.81□□□□□ -2.12
PTPRK-202ENST00000368205 SPATA8Q6RVD6 105 aa1.81□□□□□ -2.12
PTPRK-202ENST00000368205 SPINK6Q6UWN8 80 aa1.81□□□□□ -2.12
PTPRK-202ENST00000368205 SSBP3-AS1Q7Z2R9 100 aa1.81□□□□□ -2.12
PTPRK-202ENST00000368205 DMAC1Q96GE9 116 aa1.81□□□□□ -2.12
PTPRK-202ENST00000368205 NOTCH1P46531 2555 aa1.81□□□□□ -2.12
PTPRK-202ENST00000368205 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
PTPRK-202ENST00000368205 COL7A1Q02388 2944 aa1.8□□□□□ -2.12
PTPRK-202ENST00000368205 NUPR2A6NF83 97 aa1.8□□□□□ -2.12
PTPRK-202ENST00000368205 LINC00313P59037 77 aa1.8□□□□□ -2.12
PTPRK-202ENST00000368205 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
PTPRK-202ENST00000368205 CIRBP-AS1Q8TBR5 109 aa1.8□□□□□ -2.12
PTPRK-202ENST00000368205 NBEAL1Q6ZS30 2694 aa1.8□□□□□ -2.12
PTPRK-202ENST00000368205 COL6A5A8TX70 2615 aa1.79□□□□□ -2.12
PTPRK-202ENST00000368205 LYSTQ99698 3801 aa1.79□□□□□ -2.12
PTPRK-202ENST00000368205 RETNLBQ9BQ08 111 aa1.79□□□□□ -2.12
PTPRK-202ENST00000368205 PLECQ15149 4684 aaKnown RBP1.79□□□□□ -2.12
PTPRK-202ENST00000368205 FCGBPQ9Y6R7 5405 aaPredicted RBP1.78□□□□□ -2.12
PTPRK-202ENST00000368205 DNAH2Q9P225 4427 aa1.78□□□□□ -2.12
PTPRK-202ENST00000368205 KRTAP13-2Q52LG2 175 aa1.78□□□□□ -2.12
PTPRK-202ENST00000368205 DNAH7Q8WXX0 4024 aa1.77□□□□□ -2.13
PTPRK-202ENST00000368205 A0A1B0GU69 56 aa1.77□□□□□ -2.13
PTPRK-202ENST00000368205 ADM2Q7Z4H4 148 aa1.77□□□□□ -2.13
PTPRK-202ENST00000368205 HECTD4Q9Y4D8 3996 aa1.76□□□□□ -2.13
PTPRK-202ENST00000368205 STAB2Q8WWQ8 2551 aa1.76□□□□□ -2.13
PTPRK-202ENST00000368205 MIR22HGQ0VDD5 57 aa1.76□□□□□ -2.13
PTPRK-202ENST00000368205 C1orf134Q5TEV5 83 aa1.76□□□□□ -2.13
PTPRK-202ENST00000368205 DNAH11Q96DT5 4516 aa1.76□□□□□ -2.13
PTPRK-202ENST00000368205 UQCR11O14957 56 aa1.75□□□□□ -2.13
PTPRK-202ENST00000368205 CSMD3Q7Z407 3707 aa1.75□□□□□ -2.13
PTPRK-202ENST00000368205 PRKDCP78527 4128 aaKnown RBP1.74□□□□□ -2.13
PTPRK-202ENST00000368205 DNAH6Q9C0G6 4158 aa1.73□□□□□ -2.13
PTPRK-202ENST00000368205 LINC01554Q52M75 96 aa1.73□□□□□ -2.13
PTPRK-202ENST00000368205 Q6ZSA8 131 aa1.73□□□□□ -2.13
PTPRK-202ENST00000368205 MGAM2Q2M2H8 2515 aa1.73□□□□□ -2.13
PTPRK-202ENST00000368205 SACSQ9NZJ4 4579 aa1.73□□□□□ -2.13
PTPRK-202ENST00000368205 FRAS1Q86XX4 4008 aa1.72□□□□□ -2.13
PTPRK-202ENST00000368205 CSAG1Q6PB30 78 aa1.72□□□□□ -2.13
PTPRK-202ENST00000368205 STARD9Q9P2P6 4700 aa1.71□□□□□ -2.14
PTPRK-202ENST00000368205 MEGF8Q7Z7M0 2845 aa1.71□□□□□ -2.14
PTPRK-202ENST00000368205 SPINK1P00995 79 aa1.71□□□□□ -2.14
PTPRK-202ENST00000368205 LRP1BQ9NZR2 4599 aa1.71□□□□□ -2.14
PTPRK-202ENST00000368205 TGP01266 2768 aa1.7□□□□□ -2.14
PTPRK-202ENST00000368205 DNAH5Q8TE73 4624 aa1.7□□□□□ -2.14
PTPRK-202ENST00000368205 PKD1P98161 4303 aa1.7□□□□□ -2.14
PTPRK-202ENST00000368205 A8MUU9 505 aa1.7□□□□□ -2.14
PTPRK-202ENST00000368205 H0YAA0 97 aa1.7□□□□□ -2.14
PTPRK-202ENST00000368205 LY6G6CO95867 125 aa1.7□□□□□ -2.14
PTPRK-202ENST00000368205 RPS29P62273 56 aaKnown RBP1.69□□□□□ -2.14
PTPRK-202ENST00000368205 LINC00304Q8N9R0 145 aa1.69□□□□□ -2.14
PTPRK-202ENST00000368205 A0A1B0GU33 70 aa1.68□□□□□ -2.14
PTPRK-202ENST00000368205 H1FX-AS1Q4G0G2 97 aa1.68□□□□□ -2.14
PTPRK-202ENST00000368205 C20orf166-AS1Q96NR2 134 aa1.68□□□□□ -2.14
PTPRK-202ENST00000368205 KMT2AQ03164 3969 aa1.68□□□□□ -2.14
PTPRK-202ENST00000368205 KRTAP25-1Q3LHN0 102 aa1.67□□□□□ -2.14
PTPRK-202ENST00000368205 C9orf92A6NGG3 77 aa1.66□□□□□ -2.14
PTPRK-202ENST00000368205 KRTAP10-4P60372 401 aaPredicted RBP1.65□□□□□ -2.15
PTPRK-202ENST00000368205 COX6B2Q6YFQ2 88 aa1.65□□□□□ -2.15
PTPRK-202ENST00000368205 FAT2Q9NYQ8 4349 aa1.65□□□□□ -2.15
PTPRK-202ENST00000368205 SMR3BP02814 79 aaPredicted RBP1.63□□□□□ -2.15
PTPRK-202ENST00000368205 CRIPTQ9P021 101 aa1.63□□□□□ -2.15
PTPRK-202ENST00000368205 PKHD1L1Q86WI1 4243 aa1.63□□□□□ -2.15
PTPRK-202ENST00000368205 VPS13BQ7Z7G8 4022 aa1.63□□□□□ -2.15
PTPRK-202ENST00000368205 ROMO1P60602 79 aa1.62□□□□□ -2.15
PTPRK-202ENST00000368205 KRTAP13-4Q3LI77 160 aa1.62□□□□□ -2.15
PTPRK-202ENST00000368205 APOBP04114 4563 aaKnown RBP1.61□□□□□ -2.15
PTPRK-202ENST00000368205 K7ERS5 55 aa1.61□□□□□ -2.15
PTPRK-202ENST00000368205 TPRXLQ17RH7 258 aa1.61□□□□□ -2.15
PTPRK-202ENST00000368205 DYNC1H1Q14204 4646 aaKnown RBP1.61□□□□□ -2.15
PTPRK-202ENST00000368205 P0C880 135 aa1.6□□□□□ -2.15
PTPRK-202ENST00000368205 RPL37P61927 97 aaKnown RBP1.6□□□□□ -2.15
PTPRK-202ENST00000368205 FLG2Q5D862 2391 aaPredicted RBP1.6□□□□□ -2.15
PTPRK-202ENST00000368205 PKHD1P08F94 4074 aa1.6□□□□□ -2.15
PTPRK-202ENST00000368205 FAT1Q14517 4588 aa1.59□□□□□ -2.16
PTPRK-202ENST00000368205 FAT3Q8TDW7 4589 aa1.59□□□□□ -2.16
PTPRK-202ENST00000368205 A0A0D9SG42 100 aa1.58□□□□□ -2.16
PTPRK-202ENST00000368205 LRP1Q07954 4544 aaKnown RBP1.58□□□□□ -2.16
PTPRK-202ENST00000368205 S4R3F8 94 aa1.57□□□□□ -2.16
PTPRK-202ENST00000368205 HYDINQ4G0P3 5121 aa1.56□□□□□ -2.16
PTPRK-202ENST00000368205 TNXBP22105 4242 aa1.56□□□□□ -2.16
PTPRK-202ENST00000368205 HSPG2P98160 4391 aa1.56□□□□□ -2.16
PTPRK-202ENST00000368205 KRTAP12-1P59990 96 aa1.56□□□□□ -2.16
PTPRK-202ENST00000368205 C10orf95Q9H7T3 257 aa1.56□□□□□ -2.16
PTPRK-202ENST00000368205 KRTAP6-3Q3LI67 103 aa1.55□□□□□ -2.16
PTPRK-202ENST00000368205 SPINT4Q6UDR6 99 aa1.53□□□□□ -2.16
PTPRK-202ENST00000368205 M0QZ58 72 aa1.52□□□□□ -2.17
PTPRK-202ENST00000368205 KRTAP21-3Q3LHN1 58 aa1.52□□□□□ -2.17
PTPRK-202ENST00000368205 DMBT1Q9UGM3 2413 aaPredicted RBP1.52□□□□□ -2.17
PTPRK-202ENST00000368205 DNHD1Q96M86 4753 aa1.51□□□□□ -2.17
PTPRK-202ENST00000368205 MT1HL1P0DM35 61 aa1.51□□□□□ -2.17
PTPRK-202ENST00000368205 Q5VSD8 79 aa1.5□□□□□ -2.17
PTPRK-202ENST00000368205 MYCBP2O75592 4640 aa1.5□□□□□ -2.17
PTPRK-202ENST00000368205 RYR2Q92736 4967 aa1.45□□□□□ -2.18
PTPRK-202ENST00000368205 KRTAP19-2Q3LHN2 52 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms