RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 ANK2Q01484 3957 aa3.2□□□□□ -1.9
SPTA1-201ENST00000368147 KMT2AQ03164 3969 aa3.2□□□□□ -1.9
SPTA1-201ENST00000368147 MT1HL1P0DM35 61 aa3.19□□□□□ -1.9
SPTA1-201ENST00000368147 KRTAP10-12P60413 245 aa3.19□□□□□ -1.9
SPTA1-201ENST00000368147 DNAH3Q8TD57 4116 aa3.18□□□□□ -1.9
SPTA1-201ENST00000368147 LYSTQ99698 3801 aa3.16□□□□□ -1.9
SPTA1-201ENST00000368147 DNAH7Q8WXX0 4024 aa3.12□□□□□ -1.91
SPTA1-201ENST00000368147 DNAH9Q9NYC9 4486 aa3.1□□□□□ -1.91
SPTA1-201ENST00000368147 KRTAP8-1Q8IUC2 63 aa3.1□□□□□ -1.91
SPTA1-201ENST00000368147 DNAH1Q9P2D7 4330 aa3.1□□□□□ -1.91
SPTA1-201ENST00000368147 KRTAP10-5P60370 271 aa3.07□□□□□ -1.92
SPTA1-201ENST00000368147 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
SPTA1-201ENST00000368147 DNAH2Q9P225 4427 aa3.07□□□□□ -1.92
SPTA1-201ENST00000368147 LCE3AQ5TA76 89 aa3.06□□□□□ -1.92
SPTA1-201ENST00000368147 DNAH10Q8IVF4 4471 aa3.06□□□□□ -1.92
SPTA1-201ENST00000368147 VPS13BQ7Z7G8 4022 aa3.05□□□□□ -1.92
SPTA1-201ENST00000368147 PRKDCP78527 4128 aaKnown RBP3.04□□□□□ -1.92
SPTA1-201ENST00000368147 KRTAP3-3Q9BYR6 98 aa3□□□□□ -1.93
SPTA1-201ENST00000368147 FAT2Q9NYQ8 4349 aa2.99□□□□□ -1.93
SPTA1-201ENST00000368147 MT3P25713 68 aa2.99□□□□□ -1.93
SPTA1-201ENST00000368147 KRTAP10-4P60372 401 aaPredicted RBP2.98□□□□□ -1.93
SPTA1-201ENST00000368147 DNAH6Q9C0G6 4158 aa2.95□□□□□ -1.94
SPTA1-201ENST00000368147 SPRR2FQ96RM1 72 aa2.94□□□□□ -1.94
SPTA1-201ENST00000368147 KRTAP3-2Q9BYR7 98 aa2.94□□□□□ -1.94
SPTA1-201ENST00000368147 HECTD4Q9Y4D8 3996 aa2.92□□□□□ -1.94
SPTA1-201ENST00000368147 MT1HP80294 61 aa2.92□□□□□ -1.94
SPTA1-201ENST00000368147 KRTAP4-1Q9BYQ7 146 aa2.9□□□□□ -1.95
SPTA1-201ENST00000368147 KRTAP19-4Q3LI73 84 aa2.89□□□□□ -1.95
SPTA1-201ENST00000368147 DNAH11Q96DT5 4516 aa2.88□□□□□ -1.95
SPTA1-201ENST00000368147 STARD9Q9P2P6 4700 aa2.87□□□□□ -1.95
SPTA1-201ENST00000368147 DNAH17Q9UFH2 4485 aa2.87□□□□□ -1.95
SPTA1-201ENST00000368147 PLECQ15149 4684 aaKnown RBP2.85□□□□□ -1.95
SPTA1-201ENST00000368147 DYNC2H1Q8NCM8 4307 aaKnown RBP2.85□□□□□ -1.95
SPTA1-201ENST00000368147 SPRR2EP22531 72 aa2.84□□□□□ -1.95
SPTA1-201ENST00000368147 SPRR2BP35325 72 aa2.84□□□□□ -1.95
SPTA1-201ENST00000368147 SPRR2AP35326 72 aa2.84□□□□□ -1.95
SPTA1-201ENST00000368147 VPS13DQ5THJ4 4388 aa2.83□□□□□ -1.96
SPTA1-201ENST00000368147 DNAH8Q96JB1 4490 aa2.82□□□□□ -1.96
SPTA1-201ENST00000368147 MT2AP02795 61 aa2.78□□□□□ -1.97
SPTA1-201ENST00000368147 KRTAP19-5Q3LI72 72 aa2.77□□□□□ -1.97
SPTA1-201ENST00000368147 MT1FP04733 61 aa2.75□□□□□ -1.97
SPTA1-201ENST00000368147 LRP1BQ9NZR2 4599 aa2.75□□□□□ -1.97
SPTA1-201ENST00000368147 DNAH5Q8TE73 4624 aa2.74□□□□□ -1.97
SPTA1-201ENST00000368147 SPRR2DP22532 72 aa2.73□□□□□ -1.97
SPTA1-201ENST00000368147 LPAP08519 4548 aa2.68□□□□□ -1.98
SPTA1-201ENST00000368147 KRTAP17-1Q9BYP8 105 aa2.68□□□□□ -1.98
SPTA1-201ENST00000368147 LCE3BQ5TA77 95 aa2.67□□□□□ -1.98
SPTA1-201ENST00000368147 PKHD1P08F94 4074 aa2.67□□□□□ -1.98
SPTA1-201ENST00000368147 PKD1P98161 4303 aa2.66□□□□□ -1.98
SPTA1-201ENST00000368147 LCE2BO14633 110 aa2.65□□□□□ -1.99
SPTA1-201ENST00000368147 HSPG2P98160 4391 aa2.64□□□□□ -1.99
SPTA1-201ENST00000368147 SPRR2GQ9BYE4 73 aa2.64□□□□□ -1.99
SPTA1-201ENST00000368147 TNXBP22105 4242 aa2.64□□□□□ -1.99
SPTA1-201ENST00000368147 PKHD1L1Q86WI1 4243 aa2.63□□□□□ -1.99
SPTA1-201ENST00000368147 LCE3CQ5T5A8 94 aa2.63□□□□□ -1.99
SPTA1-201ENST00000368147 MT1GP13640 62 aa2.6□□□□□ -1.99
SPTA1-201ENST00000368147 SACSQ9NZJ4 4579 aa2.59□□□□□ -2
SPTA1-201ENST00000368147 KRTAP12-4P60329 112 aa2.58□□□□□ -2
SPTA1-201ENST00000368147 FAT1Q14517 4588 aa2.58□□□□□ -2
SPTA1-201ENST00000368147 FLGP20930 4061 aaPredicted RBP2.58□□□□□ -2
SPTA1-201ENST00000368147 DYNC1H1Q14204 4646 aaKnown RBP2.58□□□□□ -2
SPTA1-201ENST00000368147 KRTAP19-1Q8IUB9 90 aa2.57□□□□□ -2
SPTA1-201ENST00000368147 KRTAP4-8A0A0G2JLE6 195 aa2.53□□□□□ -2
SPTA1-201ENST00000368147 KRTAP4-8Q9BYQ9 185 aa2.53□□□□□ -2
SPTA1-201ENST00000368147 MT4P47944 62 aa2.53□□□□□ -2
SPTA1-201ENST00000368147 FAT3Q8TDW7 4589 aa2.52□□□□□ -2.01
SPTA1-201ENST00000368147 LCE2CQ5TA81 110 aa2.51□□□□□ -2.01
SPTA1-201ENST00000368147 APOBP04114 4563 aaKnown RBP2.51□□□□□ -2.01
SPTA1-201ENST00000368147 SPRR5A0A1B0GTR4 108 aa2.51□□□□□ -2.01
SPTA1-201ENST00000368147 LCE2DQ5TA82 110 aaPredicted RBP2.49□□□□□ -2.01
SPTA1-201ENST00000368147 LRP1Q07954 4544 aaKnown RBP2.46□□□□□ -2.02
SPTA1-201ENST00000368147 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
SPTA1-201ENST00000368147 DNHD1Q96M86 4753 aa2.45□□□□□ -2.02
SPTA1-201ENST00000368147 KRTAP9-2Q9BYQ4 174 aa2.45□□□□□ -2.02
SPTA1-201ENST00000368147 MT1XP80297 61 aa2.45□□□□□ -2.02
SPTA1-201ENST00000368147 KRTAP9-8Q9BYQ0 159 aa2.42□□□□□ -2.02
SPTA1-201ENST00000368147 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
SPTA1-201ENST00000368147 MT1BP07438 61 aa2.38□□□□□ -2.03
SPTA1-201ENST00000368147 MYCBP2O75592 4640 aa2.38□□□□□ -2.03
SPTA1-201ENST00000368147 KRTAP4-7Q9BYR0 210 aa2.37□□□□□ -2.03
SPTA1-201ENST00000368147 KRTAP19-8Q3LI54 63 aa2.37□□□□□ -2.03
SPTA1-201ENST00000368147 KRTAP9-3Q9BYQ3 159 aa2.36□□□□□ -2.03
SPTA1-201ENST00000368147 RYR1P21817 5038 aa2.35□□□□□ -2.03
SPTA1-201ENST00000368147 KRTAP9-6A0A140TA67 174 aa2.34□□□□□ -2.03
SPTA1-201ENST00000368147 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
SPTA1-201ENST00000368147 HYDINQ4G0P3 5121 aa2.32□□□□□ -2.04
SPTA1-201ENST00000368147 LOC100996750A0A140TA64 210 aa2.31□□□□□ -2.04
SPTA1-201ENST00000368147 LCE1DQ5T752 114 aa2.3□□□□□ -2.04
SPTA1-201ENST00000368147 MUC17Q685J3 4493 aa2.29□□□□□ -2.04
SPTA1-201ENST00000368147 KRTAP19-3Q7Z4W3 81 aa2.29□□□□□ -2.04
SPTA1-201ENST00000368147 LCE4AQ5TA78 99 aa2.29□□□□□ -2.04
SPTA1-201ENST00000368147 KRTAP20-1Q3LI63 56 aa2.28□□□□□ -2.04
SPTA1-201ENST00000368147 RYR3Q15413 4870 aa2.28□□□□□ -2.04
SPTA1-201ENST00000368147 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.04
SPTA1-201ENST00000368147 KRTAP19-6Q3LI70 58 aa2.25□□□□□ -2.05
SPTA1-201ENST00000368147 PRM1P04553 51 aa2.25□□□□□ -2.05
SPTA1-201ENST00000368147 LCE5AQ5TCM9 118 aa2.21□□□□□ -2.05
SPTA1-201ENST00000368147 HERC1Q15751 4861 aa2.21□□□□□ -2.06
SPTA1-201ENST00000368147 MT1LQ93083 61 aa2.21□□□□□ -2.06
SPTA1-201ENST00000368147 LRP2P98164 4655 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms