RNA–Protein interactions for RNA: ENST00000361724.3

PCDH11X-203, Transcript of protocadherin 11 X-linked, humanhuman

TSL 1 (best)

Gene PCDH11X, Length 4,603 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-203ENST00000361724 NBEAQ8NFP9 2946 aa1.62□□□□□ -2.15
PCDH11X-203ENST00000361724 FRAS1Q86XX4 4008 aa1.62□□□□□ -2.15
PCDH11X-203ENST00000361724 ATMQ13315 3056 aa1.62□□□□□ -2.15
PCDH11X-203ENST00000361724 CSMD1Q96PZ7 3565 aa1.62□□□□□ -2.15
PCDH11X-203ENST00000361724 PCLOQ9Y6V0 5065 aa1.62□□□□□ -2.15
PCDH11X-203ENST00000361724 DSPP15924 2871 aaKnown RBP1.61□□□□□ -2.15
PCDH11X-203ENST00000361724 ANK2Q01484 3957 aa1.61□□□□□ -2.15
PCDH11X-203ENST00000361724 SPRR2EP22531 72 aa1.61□□□□□ -2.15
PCDH11X-203ENST00000361724 SPRR2DP22532 72 aa1.61□□□□□ -2.15
PCDH11X-203ENST00000361724 SPRR2BP35325 72 aa1.61□□□□□ -2.15
PCDH11X-203ENST00000361724 SPRR2AP35326 72 aa1.61□□□□□ -2.15
PCDH11X-203ENST00000361724 GPR98Q8WXG9 6306 aa1.61□□□□□ -2.15
PCDH11X-203ENST00000361724 SVEP1Q4LDE5 3571 aa1.61□□□□□ -2.15
PCDH11X-203ENST00000361724 M0QZ58 72 aa1.61□□□□□ -2.15
PCDH11X-203ENST00000361724 TENM2Q9NT68 2774 aa1.61□□□□□ -2.15
PCDH11X-203ENST00000361724 LRP1BQ9NZR2 4599 aa1.61□□□□□ -2.15
PCDH11X-203ENST00000361724 KRTAP8-1Q8IUC2 63 aa1.6□□□□□ -2.15
PCDH11X-203ENST00000361724 CUBNO60494 3623 aa1.6□□□□□ -2.15
PCDH11X-203ENST00000361724 KRTAP23-1A1A580 65 aa1.6□□□□□ -2.15
PCDH11X-203ENST00000361724 DNAH6Q9C0G6 4158 aa1.6□□□□□ -2.15
PCDH11X-203ENST00000361724 KRTAP15-1Q3LI76 137 aa1.6□□□□□ -2.15
PCDH11X-203ENST00000361724 DNAH7Q8WXX0 4024 aa1.6□□□□□ -2.15
PCDH11X-203ENST00000361724 CMYA5Q8N3K9 4069 aa1.59□□□□□ -2.15
PCDH11X-203ENST00000361724 KRTAP1-4P0C5Y4 121 aa1.59□□□□□ -2.15
PCDH11X-203ENST00000361724 AKAP13Q12802 2813 aa1.59□□□□□ -2.15
PCDH11X-203ENST00000361724 KRTAP19-4Q3LI73 84 aa1.59□□□□□ -2.16
PCDH11X-203ENST00000361724 KRTAP2-2Q9BYT5 123 aa1.59□□□□□ -2.16
PCDH11X-203ENST00000361724 KRTAP2-1Q9BYU5 128 aa1.59□□□□□ -2.16
PCDH11X-203ENST00000361724 PKHD1P08F94 4074 aa1.58□□□□□ -2.16
PCDH11X-203ENST00000361724 INE1O15225 51 aa1.58□□□□□ -2.16
PCDH11X-203ENST00000361724 DYNC2H1Q8NCM8 4307 aaKnown RBP1.58□□□□□ -2.16
PCDH11X-203ENST00000361724 ALMS1Q8TCU4 4167 aa1.58□□□□□ -2.16
PCDH11X-203ENST00000361724 KRTAP10-6P60371 365 aaPredicted RBP1.58□□□□□ -2.16
PCDH11X-203ENST00000361724 TNP1P09430 55 aa1.57□□□□□ -2.16
PCDH11X-203ENST00000361724 KMT2CQ8NEZ4 4911 aaKnown RBP1.57□□□□□ -2.16
PCDH11X-203ENST00000361724 PRRC2CQ9Y520 2896 aaKnown RBP1.57□□□□□ -2.16
PCDH11X-203ENST00000361724 KRTAP10-4P60372 401 aaPredicted RBP1.57□□□□□ -2.16
PCDH11X-203ENST00000361724 FBN2P35556 2912 aa1.57□□□□□ -2.16
PCDH11X-203ENST00000361724 LRBAP50851 2863 aa1.55□□□□□ -2.16
PCDH11X-203ENST00000361724 UTP20O75691 2785 aaKnown RBP1.55□□□□□ -2.16
PCDH11X-203ENST00000361724 HERC1Q15751 4861 aa1.55□□□□□ -2.16
PCDH11X-203ENST00000361724 LYSTQ99698 3801 aa1.55□□□□□ -2.16
PCDH11X-203ENST00000361724 ADGRG4Q8IZF6 3080 aa1.55□□□□□ -2.16
PCDH11X-203ENST00000361724 TACC2O95359 2948 aa1.55□□□□□ -2.16
PCDH11X-203ENST00000361724 LRP2P98164 4655 aa1.53□□□□□ -2.16
PCDH11X-203ENST00000361724 KRTAP13-2Q52LG2 175 aa1.53□□□□□ -2.16
PCDH11X-203ENST00000361724 MGAQ8IWI9 3026 aa1.53□□□□□ -2.17
PCDH11X-203ENST00000361724 SPRR2FQ96RM1 72 aa1.52□□□□□ -2.17
PCDH11X-203ENST00000361724 CRYBG3Q68DQ2 2970 aa1.52□□□□□ -2.17
PCDH11X-203ENST00000361724 CELSR2Q9HCU4 2923 aa1.52□□□□□ -2.17
PCDH11X-203ENST00000361724 RYR1P21817 5038 aa1.52□□□□□ -2.17
PCDH11X-203ENST00000361724 KRTAP7-1Q8IUC3 87 aa1.51□□□□□ -2.17
PCDH11X-203ENST00000361724 HERC2O95714 4834 aa1.51□□□□□ -2.17
PCDH11X-203ENST00000361724 VPS13DQ5THJ4 4388 aa1.51□□□□□ -2.17
PCDH11X-203ENST00000361724 KRTAP13-1Q8IUC0 172 aa1.5□□□□□ -2.17
PCDH11X-203ENST00000361724 KRTAP3-1Q9BYR8 98 aa1.5□□□□□ -2.17
PCDH11X-203ENST00000361724 CSMD2Q7Z408 3487 aa1.5□□□□□ -2.17
PCDH11X-203ENST00000361724 KRTAP12-4P60329 112 aa1.49□□□□□ -2.17
PCDH11X-203ENST00000361724 DNAH17Q9UFH2 4485 aa1.49□□□□□ -2.17
PCDH11X-203ENST00000361724 KRTAP4-4Q9BYR3 166 aa1.49□□□□□ -2.17
PCDH11X-203ENST00000361724 CENPEQ02224 2701 aa1.49□□□□□ -2.17
PCDH11X-203ENST00000361724 HUWE1Q7Z6Z7 4374 aaKnown RBP1.49□□□□□ -2.17
PCDH11X-203ENST00000361724 NEBP20929 6669 aa1.48□□□□□ -2.17
PCDH11X-203ENST00000361724 TENM1Q9UKZ4 2725 aa1.47□□□□□ -2.17
PCDH11X-203ENST00000361724 PDZD2O15018 2839 aa1.47□□□□□ -2.17
PCDH11X-203ENST00000361724 MXRA5Q9NR99 2828 aa1.47□□□□□ -2.17
PCDH11X-203ENST00000361724 COL12A1Q99715 3063 aa1.47□□□□□ -2.17
PCDH11X-203ENST00000361724 DNAH9Q9NYC9 4486 aa1.46□□□□□ -2.18
PCDH11X-203ENST00000361724 KRTAP12-2P59991 146 aa1.46□□□□□ -2.18
PCDH11X-203ENST00000361724 MT1HP80294 61 aa1.46□□□□□ -2.18
PCDH11X-203ENST00000361724 DNHD1Q96M86 4753 aa1.46□□□□□ -2.18
PCDH11X-203ENST00000361724 KIAA1109Q2LD37 5005 aa1.45□□□□□ -2.18
PCDH11X-203ENST00000361724 DNAH8Q96JB1 4490 aa1.45□□□□□ -2.18
PCDH11X-203ENST00000361724 MT3P25713 68 aa1.45□□□□□ -2.18
PCDH11X-203ENST00000361724 LCE1AQ5T7P2 110 aa1.45□□□□□ -2.18
PCDH11X-203ENST00000361724 DNAH10Q8IVF4 4471 aa1.45□□□□□ -2.18
PCDH11X-203ENST00000361724 KRTAP12-1P59990 96 aa1.44□□□□□ -2.18
PCDH11X-203ENST00000361724 KRTAP13-4Q3LI77 160 aa1.44□□□□□ -2.18
PCDH11X-203ENST00000361724 PLECQ15149 4684 aaKnown RBP1.44□□□□□ -2.18
PCDH11X-203ENST00000361724 APCP25054 2843 aa1.43□□□□□ -2.18
PCDH11X-203ENST00000361724 RYR3Q15413 4870 aa1.43□□□□□ -2.18
PCDH11X-203ENST00000361724 KRTAP19-6Q3LI70 58 aa1.41□□□□□ -2.18
PCDH11X-203ENST00000361724 KRTAP5-11Q6L8G4 156 aa1.41□□□□□ -2.18
PCDH11X-203ENST00000361724 DNAH2Q9P225 4427 aa1.41□□□□□ -2.18
PCDH11X-203ENST00000361724 HSPG2P98160 4391 aa1.4□□□□□ -2.19
PCDH11X-203ENST00000361724 PKD1P98161 4303 aa1.4□□□□□ -2.19
PCDH11X-203ENST00000361724 FBN1P35555 2871 aaKnown RBP1.39□□□□□ -2.19
PCDH11X-203ENST00000361724 NIPBLQ6KC79 2804 aaeCLIP1.38□□□□□ -2.19
PCDH11X-203ENST00000361724 NF1P21359 2839 aa1.38□□□□□ -2.19
PCDH11X-203ENST00000361724 SACSQ9NZJ4 4579 aa1.38□□□□□ -2.19
PCDH11X-203ENST00000361724 ZANQ9Y493 2812 aa1.38□□□□□ -2.19
PCDH11X-203ENST00000361724 DNAH11Q96DT5 4516 aa1.37□□□□□ -2.19
PCDH11X-203ENST00000361724 OTOGQ6ZRI0 2925 aa1.37□□□□□ -2.19
PCDH11X-203ENST00000361724 SYNE2Q8WXH0 6885 aaKnown RBP1.36□□□□□ -2.19
PCDH11X-203ENST00000361724 NBEAL2Q6ZNJ1 2754 aa1.36□□□□□ -2.19
PCDH11X-203ENST00000361724 LRP1Q07954 4544 aaKnown RBP1.36□□□□□ -2.19
PCDH11X-203ENST00000361724 KRTAP5-8O75690 187 aa1.35□□□□□ -2.19
PCDH11X-203ENST00000361724 FAT2Q9NYQ8 4349 aa1.35□□□□□ -2.19
PCDH11X-203ENST00000361724 VPS13BQ7Z7G8 4022 aa1.35□□□□□ -2.19
PCDH11X-203ENST00000361724 DNAH5Q8TE73 4624 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms