RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 CRCT1Q9UGL9 99 aa3.64□□□□□ -1.83
CCDC196-201ENST00000359454 MUC17Q685J3 4493 aa3.64□□□□□ -1.83
CCDC196-201ENST00000359454 ADM2Q7Z4H4 148 aa3.63□□□□□ -1.83
CCDC196-201ENST00000359454 A0A1W2PNM2 257 aa3.62□□□□□ -1.83
CCDC196-201ENST00000359454 RPL37AP8A6NKH3 93 aa3.62□□□□□ -1.83
CCDC196-201ENST00000359454 KRTAP13-1Q8IUC0 172 aa3.62□□□□□ -1.83
CCDC196-201ENST00000359454 ETDCA0A1B0GVM5 59 aa3.6□□□□□ -1.83
CCDC196-201ENST00000359454 KRTAP16-1A8MUX0 517 aa3.6□□□□□ -1.83
CCDC196-201ENST00000359454 SPAG11AQ6PDA7 123 aa3.6□□□□□ -1.83
CCDC196-201ENST00000359454 IGLV9-49A0A0B4J1Y8 123 aa3.59□□□□□ -1.83
CCDC196-201ENST00000359454 H3BPC8 53 aa3.59□□□□□ -1.83
CCDC196-201ENST00000359454 SPRR1AP35321 89 aa3.59□□□□□ -1.83
CCDC196-201ENST00000359454 Q6ZQY7 126 aa3.59□□□□□ -1.83
CCDC196-201ENST00000359454 Q8NDZ9 215 aa3.59□□□□□ -1.83
CCDC196-201ENST00000359454 SPINK7P58062 85 aa3.58□□□□□ -1.84
CCDC196-201ENST00000359454 KRTAP13-3Q3SY46 172 aa3.58□□□□□ -1.84
CCDC196-201ENST00000359454 CSAG1Q6PB30 78 aa3.58□□□□□ -1.84
CCDC196-201ENST00000359454 Q6ZRX8 168 aa3.58□□□□□ -1.84
CCDC196-201ENST00000359454 PRLHP81277 87 aa3.57□□□□□ -1.84
CCDC196-201ENST00000359454 KRTAP4-1Q9BYQ7 146 aa3.57□□□□□ -1.84
CCDC196-201ENST00000359454 MT3P25713 68 aa3.56□□□□□ -1.84
CCDC196-201ENST00000359454 IGLV5-48A0A075B6I7 105 aa3.55□□□□□ -1.84
CCDC196-201ENST00000359454 KRTAP4-16G5E9R7 235 aaPredicted RBP3.55□□□□□ -1.84
CCDC196-201ENST00000359454 COA5Q86WW8 74 aa3.55□□□□□ -1.84
CCDC196-201ENST00000359454 H0Y9P7 68 aa3.54□□□□□ -1.84
CCDC196-201ENST00000359454 SPINK1P00995 79 aa3.54□□□□□ -1.84
CCDC196-201ENST00000359454 MIR22HGQ0VDD5 57 aa3.54□□□□□ -1.84
CCDC196-201ENST00000359454 SPRR4Q96PI1 79 aa3.54□□□□□ -1.84
CCDC196-201ENST00000359454 Q8NBF4 154 aa3.53□□□□□ -1.84
CCDC196-201ENST00000359454 KRTAP2-2Q9BYT5 123 aa3.53□□□□□ -1.84
CCDC196-201ENST00000359454 SPATA8Q6RVD6 105 aa3.52□□□□□ -1.85
CCDC196-201ENST00000359454 Q8N377 158 aa3.52□□□□□ -1.85
CCDC196-201ENST00000359454 ST20-AS1Q8NBB2 130 aa3.52□□□□□ -1.85
CCDC196-201ENST00000359454 FSIP2Q5CZC0 6907 aa3.52□□□□□ -1.85
CCDC196-201ENST00000359454 A0A087WSZ3 146 aa3.51□□□□□ -1.85
CCDC196-201ENST00000359454 SPRR1BP22528 89 aa3.51□□□□□ -1.85
CCDC196-201ENST00000359454 Q8N9L7 120 aa3.51□□□□□ -1.85
CCDC196-201ENST00000359454 IGLV8-61A0A075B6I0 122 aa3.5□□□□□ -1.85
CCDC196-201ENST00000359454 P0C880 135 aa3.5□□□□□ -1.85
CCDC196-201ENST00000359454 RPS29P62273 56 aaKnown RBP3.5□□□□□ -1.85
CCDC196-201ENST00000359454 MT1HP80294 61 aa3.5□□□□□ -1.85
CCDC196-201ENST00000359454 DEFB105AQ8NG35 78 aa3.5□□□□□ -1.85
CCDC196-201ENST00000359454 KRTAP25-1Q3LHN0 102 aa3.49□□□□□ -1.85
CCDC196-201ENST00000359454 KRTAP19-2Q3LHN2 52 aa3.48□□□□□ -1.85
CCDC196-201ENST00000359454 LINC00483Q53H64 154 aa3.48□□□□□ -1.85
CCDC196-201ENST00000359454 SSBP3-AS1Q7Z2R9 100 aa3.48□□□□□ -1.85
CCDC196-201ENST00000359454 KRTAP10-6P60371 365 aaPredicted RBP3.46□□□□□ -1.86
CCDC196-201ENST00000359454 A8MWP4 228 aa3.45□□□□□ -1.86
CCDC196-201ENST00000359454 K7ERS5 55 aa3.45□□□□□ -1.86
CCDC196-201ENST00000359454 LUZP6Q538Z0 58 aa3.45□□□□□ -1.86
CCDC196-201ENST00000359454 PCOTHQ58A44 107 aa3.45□□□□□ -1.86
CCDC196-201ENST00000359454 C8orf17Q9NRJ1 99 aa3.45□□□□□ -1.86
CCDC196-201ENST00000359454 UQCR11O14957 56 aa3.44□□□□□ -1.86
CCDC196-201ENST00000359454 C20orf166-AS1Q96NR2 134 aa3.44□□□□□ -1.86
CCDC196-201ENST00000359454 M0R2T5 61 aa3.43□□□□□ -1.86
CCDC196-201ENST00000359454 IGFL1Q6UW32 110 aa3.42□□□□□ -1.86
CCDC196-201ENST00000359454 DSCR10P59022 87 aa3.41□□□□□ -1.86
CCDC196-201ENST00000359454 DMAC1Q96GE9 116 aa3.41□□□□□ -1.86
CCDC196-201ENST00000359454 C9orf92A6NGG3 77 aa3.4□□□□□ -1.87
CCDC196-201ENST00000359454 COX6B2Q6YFQ2 88 aa3.39□□□□□ -1.87
CCDC196-201ENST00000359454 HRES1P13985 223 aa3.38□□□□□ -1.87
CCDC196-201ENST00000359454 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
CCDC196-201ENST00000359454 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
CCDC196-201ENST00000359454 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
CCDC196-201ENST00000359454 A8MUU9 505 aa3.37□□□□□ -1.87
CCDC196-201ENST00000359454 K7EQZ3 153 aa3.37□□□□□ -1.87
CCDC196-201ENST00000359454 LINC00472Q9H8W2 130 aa3.36□□□□□ -1.87
CCDC196-201ENST00000359454 RPL37P61927 97 aaKnown RBP3.35□□□□□ -1.87
CCDC196-201ENST00000359454 TP53AIP1Q9HCN2 124 aa3.35□□□□□ -1.87
CCDC196-201ENST00000359454 Q5W150 140 aa3.34□□□□□ -1.87
CCDC196-201ENST00000359454 A0A1B0GU69 56 aa3.33□□□□□ -1.88
CCDC196-201ENST00000359454 FLGP20930 4061 aaPredicted RBP3.32□□□□□ -1.88
CCDC196-201ENST00000359454 WFDC13Q8IUB5 93 aa3.3□□□□□ -1.88
CCDC196-201ENST00000359454 A0A1B0GVX0 72 aa3.29□□□□□ -1.88
CCDC196-201ENST00000359454 CAMK2N1Q7Z7J9 78 aa3.28□□□□□ -1.88
CCDC196-201ENST00000359454 Q96NJ1 140 aa3.28□□□□□ -1.88
CCDC196-201ENST00000359454 A0A0G2JQZ4 141 aa3.27□□□□□ -1.89
CCDC196-201ENST00000359454 DEFB116Q30KQ4 102 aa3.27□□□□□ -1.89
CCDC196-201ENST00000359454 MRPL34Q9BQ48 92 aaKnown RBP3.27□□□□□ -1.89
CCDC196-201ENST00000359454 MMP24-AS1A0A0U1RRL7 71 aa3.26□□□□□ -1.89
CCDC196-201ENST00000359454 ACYP2P14621 99 aa3.26□□□□□ -1.89
CCDC196-201ENST00000359454 SPINT4Q6UDR6 99 aa3.26□□□□□ -1.89
CCDC196-201ENST00000359454 USH2AO75445 5202 aa3.24□□□□□ -1.89
CCDC196-201ENST00000359454 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
CCDC196-201ENST00000359454 FCGBPQ9Y6R7 5405 aaPredicted RBP3.22□□□□□ -1.89
CCDC196-201ENST00000359454 SSPOA2VEC9 5147 aa3.22□□□□□ -1.89
CCDC196-201ENST00000359454 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
CCDC196-201ENST00000359454 MT2AP02795 61 aa3.21□□□□□ -1.9
CCDC196-201ENST00000359454 KRTAP10-7P60409 375 aaPredicted RBP3.2□□□□□ -1.9
CCDC196-201ENST00000359454 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
CCDC196-201ENST00000359454 MT1FP04733 61 aa3.18□□□□□ -1.9
CCDC196-201ENST00000359454 KRTAP10-10P60014 251 aa3.17□□□□□ -1.9
CCDC196-201ENST00000359454 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
CCDC196-201ENST00000359454 SYNE2Q8WXH0 6885 aaKnown RBP3.15□□□□□ -1.9
CCDC196-201ENST00000359454 MACF1Q9UPN3 7388 aaKnown RBP3.14□□□□□ -1.91
CCDC196-201ENST00000359454 KRTAP19-6Q3LI70 58 aa3.14□□□□□ -1.91
CCDC196-201ENST00000359454 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
CCDC196-201ENST00000359454 A0A1B0GU33 70 aa3.12□□□□□ -1.91
CCDC196-201ENST00000359454 KRTAP10-12P60413 245 aa3.12□□□□□ -1.91
CCDC196-201ENST00000359454 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms