RNA–Protein interactions for RNA: ENST00000357681.9

ATP2B4-203, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2B4, Length 8,968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-203ENST00000357681 KRTAP3-3Q9BYR6 98 aa3.89□□□□□ -1.79
ATP2B4-203ENST00000357681 CUBNO60494 3623 aa3.79□□□□□ -1.8
ATP2B4-203ENST00000357681 DNAH6Q9C0G6 4158 aa3.78□□□□□ -1.8
ATP2B4-203ENST00000357681 ANK3Q12955 4377 aaKnown RBP3.76□□□□□ -1.81
ATP2B4-203ENST00000357681 CSMD3Q7Z407 3707 aa3.71□□□□□ -1.82
ATP2B4-203ENST00000357681 LCE3AQ5TA76 89 aa3.64□□□□□ -1.83
ATP2B4-203ENST00000357681 PRKDCP78527 4128 aaKnown RBP3.63□□□□□ -1.83
ATP2B4-203ENST00000357681 KMT2AQ03164 3969 aa3.59□□□□□ -1.83
ATP2B4-203ENST00000357681 MT1HL1P0DM35 61 aa3.59□□□□□ -1.83
ATP2B4-203ENST00000357681 MT3P25713 68 aa3.57□□□□□ -1.84
ATP2B4-203ENST00000357681 SPRR2GQ9BYE4 73 aa3.55□□□□□ -1.84
ATP2B4-203ENST00000357681 DYNC2H1Q8NCM8 4307 aaKnown RBP3.53□□□□□ -1.84
ATP2B4-203ENST00000357681 FRAS1Q86XX4 4008 aa3.53□□□□□ -1.84
ATP2B4-203ENST00000357681 KRTAP8-1Q8IUC2 63 aa3.53□□□□□ -1.84
ATP2B4-203ENST00000357681 KRTAP10-5P60370 271 aa3.52□□□□□ -1.85
ATP2B4-203ENST00000357681 KRTAP10-4P60372 401 aaPredicted RBP3.51□□□□□ -1.85
ATP2B4-203ENST00000357681 DNAH2Q9P225 4427 aa3.51□□□□□ -1.85
ATP2B4-203ENST00000357681 HUWE1Q7Z6Z7 4374 aaKnown RBP3.5□□□□□ -1.85
ATP2B4-203ENST00000357681 DNAH1Q9P2D7 4330 aa3.49□□□□□ -1.85
ATP2B4-203ENST00000357681 VPS13BQ7Z7G8 4022 aa3.48□□□□□ -1.85
ATP2B4-203ENST00000357681 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
ATP2B4-203ENST00000357681 LORP23490 312 aaPredicted RBP3.44□□□□□ -1.86
ATP2B4-203ENST00000357681 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
ATP2B4-203ENST00000357681 DNAH9Q9NYC9 4486 aa3.37□□□□□ -1.87
ATP2B4-203ENST00000357681 KRTAP10-7P60409 375 aaPredicted RBP3.36□□□□□ -1.87
ATP2B4-203ENST00000357681 CRCT1Q9UGL9 99 aa3.33□□□□□ -1.88
ATP2B4-203ENST00000357681 STARD9Q9P2P6 4700 aa3.33□□□□□ -1.88
ATP2B4-203ENST00000357681 PKHD1P08F94 4074 aa3.32□□□□□ -1.88
ATP2B4-203ENST00000357681 VPS13DQ5THJ4 4388 aa3.28□□□□□ -1.88
ATP2B4-203ENST00000357681 DNAH17Q9UFH2 4485 aa3.25□□□□□ -1.89
ATP2B4-203ENST00000357681 DNAH10Q8IVF4 4471 aa3.25□□□□□ -1.89
ATP2B4-203ENST00000357681 FAT2Q9NYQ8 4349 aa3.23□□□□□ -1.89
ATP2B4-203ENST00000357681 PKHD1L1Q86WI1 4243 aa3.23□□□□□ -1.89
ATP2B4-203ENST00000357681 PLECQ15149 4684 aaKnown RBP3.21□□□□□ -1.9
ATP2B4-203ENST00000357681 KRTAP19-8Q3LI54 63 aa3.21□□□□□ -1.9
ATP2B4-203ENST00000357681 DNAH11Q96DT5 4516 aa3.21□□□□□ -1.9
ATP2B4-203ENST00000357681 DNAH8Q96JB1 4490 aa3.2□□□□□ -1.9
ATP2B4-203ENST00000357681 FLGP20930 4061 aaPredicted RBP3.2□□□□□ -1.9
ATP2B4-203ENST00000357681 KRTAP19-5Q3LI72 72 aa3.19□□□□□ -1.9
ATP2B4-203ENST00000357681 PKD1P98161 4303 aa3.18□□□□□ -1.9
ATP2B4-203ENST00000357681 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
ATP2B4-203ENST00000357681 MT2AP02795 61 aa3.12□□□□□ -1.91
ATP2B4-203ENST00000357681 MT1HP80294 61 aa3.1□□□□□ -1.91
ATP2B4-203ENST00000357681 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
ATP2B4-203ENST00000357681 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
ATP2B4-203ENST00000357681 MT1GP13640 62 aa3.06□□□□□ -1.92
ATP2B4-203ENST00000357681 DNAH5Q8TE73 4624 aa3.04□□□□□ -1.92
ATP2B4-203ENST00000357681 MT1LQ93083 61 aa3.03□□□□□ -1.92
ATP2B4-203ENST00000357681 LRP1Q07954 4544 aaKnown RBP3.02□□□□□ -1.93
ATP2B4-203ENST00000357681 DYNC1H1Q14204 4646 aaKnown RBP3.02□□□□□ -1.93
ATP2B4-203ENST00000357681 TNXBP22105 4242 aa3□□□□□ -1.93
ATP2B4-203ENST00000357681 MT1FP04733 61 aa3□□□□□ -1.93
ATP2B4-203ENST00000357681 KRTAP4-5Q9BYR2 181 aa3□□□□□ -1.93
ATP2B4-203ENST00000357681 SPRR2FQ96RM1 72 aa3□□□□□ -1.93
ATP2B4-203ENST00000357681 KRTAP4-1Q9BYQ7 146 aa3□□□□□ -1.93
ATP2B4-203ENST00000357681 DNHD1Q96M86 4753 aa3□□□□□ -1.93
ATP2B4-203ENST00000357681 KRTAP19-1Q8IUB9 90 aa2.97□□□□□ -1.93
ATP2B4-203ENST00000357681 SACSQ9NZJ4 4579 aa2.97□□□□□ -1.93
ATP2B4-203ENST00000357681 LRP1BQ9NZR2 4599 aa2.94□□□□□ -1.94
ATP2B4-203ENST00000357681 MT1XP80297 61 aa2.94□□□□□ -1.94
ATP2B4-203ENST00000357681 APOBP04114 4563 aaKnown RBP2.94□□□□□ -1.94
ATP2B4-203ENST00000357681 RYR1P21817 5038 aa2.93□□□□□ -1.94
ATP2B4-203ENST00000357681 LCE3BQ5TA77 95 aa2.9□□□□□ -1.95
ATP2B4-203ENST00000357681 MT1EP04732 61 aa2.9□□□□□ -1.95
ATP2B4-203ENST00000357681 RYR2Q92736 4967 aa2.89□□□□□ -1.95
ATP2B4-203ENST00000357681 LCE2BO14633 110 aa2.87□□□□□ -1.95
ATP2B4-203ENST00000357681 SPRR2AP35326 72 aa2.86□□□□□ -1.95
ATP2B4-203ENST00000357681 HSPG2P98160 4391 aa2.85□□□□□ -1.95
ATP2B4-203ENST00000357681 FAT1Q14517 4588 aa2.83□□□□□ -1.96
ATP2B4-203ENST00000357681 KRTAP19-3Q7Z4W3 81 aa2.81□□□□□ -1.96
ATP2B4-203ENST00000357681 SPRR2BP35325 72 aa2.81□□□□□ -1.96
ATP2B4-203ENST00000357681 MYCBP2O75592 4640 aa2.79□□□□□ -1.96
ATP2B4-203ENST00000357681 RYR3Q15413 4870 aa2.78□□□□□ -1.96
ATP2B4-203ENST00000357681 MT1AP04731 61 aa2.77□□□□□ -1.97
ATP2B4-203ENST00000357681 MT1BP07438 61 aa2.77□□□□□ -1.97
ATP2B4-203ENST00000357681 SPRR2EP22531 72 aa2.77□□□□□ -1.97
ATP2B4-203ENST00000357681 HYDINQ4G0P3 5121 aa2.75□□□□□ -1.97
ATP2B4-203ENST00000357681 KRTAP2-3P0C7H8 128 aa2.74□□□□□ -1.97
ATP2B4-203ENST00000357681 KRTAP2-4Q9BYR9 128 aa2.74□□□□□ -1.97
ATP2B4-203ENST00000357681 KRTAP2-1Q9BYU5 128 aa2.74□□□□□ -1.97
ATP2B4-203ENST00000357681 SPRR2DP22532 72 aa2.73□□□□□ -1.97
ATP2B4-203ENST00000357681 MT1MQ8N339 61 aa2.72□□□□□ -1.97
ATP2B4-203ENST00000357681 KRTAP9-8Q9BYQ0 159 aa2.71□□□□□ -1.98
ATP2B4-203ENST00000357681 FAT3Q8TDW7 4589 aa2.71□□□□□ -1.98
ATP2B4-203ENST00000357681 PRM1P04553 51 aa2.71□□□□□ -1.98
ATP2B4-203ENST00000357681 KMT2CQ8NEZ4 4911 aaKnown RBP2.67□□□□□ -1.98
ATP2B4-203ENST00000357681 KRTAP9-3Q9BYQ3 159 aa2.67□□□□□ -1.98
ATP2B4-203ENST00000357681 PCLOQ9Y6V0 5065 aa2.66□□□□□ -1.98
ATP2B4-203ENST00000357681 LCE2CQ5TA81 110 aa2.61□□□□□ -1.99
ATP2B4-203ENST00000357681 KRTAP17-1Q9BYP8 105 aa2.6□□□□□ -1.99
ATP2B4-203ENST00000357681 MUC17Q685J3 4493 aa2.58□□□□□ -2
ATP2B4-203ENST00000357681 HERC2O95714 4834 aa2.58□□□□□ -2
ATP2B4-203ENST00000357681 KIAA1109Q2LD37 5005 aa2.55□□□□□ -2
ATP2B4-203ENST00000357681 LRP2P98164 4655 aa2.53□□□□□ -2
ATP2B4-203ENST00000357681 KRTAP19-6Q3LI70 58 aa2.52□□□□□ -2.01
ATP2B4-203ENST00000357681 KRTAP4-8A0A0G2JLE6 195 aa2.52□□□□□ -2.01
ATP2B4-203ENST00000357681 KRTAP4-8Q9BYQ9 185 aa2.52□□□□□ -2.01
ATP2B4-203ENST00000357681 KRTAP19-2Q3LHN2 52 aa2.52□□□□□ -2.01
ATP2B4-203ENST00000357681 LCE1AQ5T7P2 110 aa2.51□□□□□ -2.01
ATP2B4-203ENST00000357681 BIRC6Q9NR09 4857 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms