RNA–Protein interactions for RNA: ENST00000355703.3

PCNX3-201, Transcript of pecanex 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNX3, Length 7,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-201ENST00000355703 SPRR2BP35325 72 aa6.4□□□□□ -1.39
PCNX3-201ENST00000355703 SPRR2AP35326 72 aa6.4□□□□□ -1.39
PCNX3-201ENST00000355703 COL7A1Q02388 2944 aa6.34□□□□□ -1.39
PCNX3-201ENST00000355703 ZNF469Q96JG9 3925 aaPredicted RBP6.28□□□□□ -1.4
PCNX3-201ENST00000355703 LCE3BQ5TA77 95 aa6.21□□□□□ -1.42
PCNX3-201ENST00000355703 KRTAP10-4P60372 401 aaPredicted RBP6.2□□□□□ -1.42
PCNX3-201ENST00000355703 KRTAP19-5Q3LI72 72 aa6.2□□□□□ -1.42
PCNX3-201ENST00000355703 CSMD3Q7Z407 3707 aa6.18□□□□□ -1.42
PCNX3-201ENST00000355703 ALMS1Q8TCU4 4167 aa6.17□□□□□ -1.42
PCNX3-201ENST00000355703 SPRR2DP22532 72 aa6.16□□□□□ -1.42
PCNX3-201ENST00000355703 MT1HP80294 61 aa6.16□□□□□ -1.42
PCNX3-201ENST00000355703 HUWE1Q7Z6Z7 4374 aaKnown RBP6.12□□□□□ -1.43
PCNX3-201ENST00000355703 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
PCNX3-201ENST00000355703 ANK3Q12955 4377 aaKnown RBP6.11□□□□□ -1.43
PCNX3-201ENST00000355703 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
PCNX3-201ENST00000355703 AKAP9Q99996 3911 aa6□□□□□ -1.45
PCNX3-201ENST00000355703 LCE3CQ5T5A8 94 aa5.96□□□□□ -1.45
PCNX3-201ENST00000355703 KRTAP4-1Q9BYQ7 146 aa5.96□□□□□ -1.46
PCNX3-201ENST00000355703 LCE2BO14633 110 aa5.95□□□□□ -1.46
PCNX3-201ENST00000355703 MT2AP02795 61 aa5.94□□□□□ -1.46
PCNX3-201ENST00000355703 MT1GP13640 62 aa5.89□□□□□ -1.47
PCNX3-201ENST00000355703 KRTAP12-4P60329 112 aa5.87□□□□□ -1.47
PCNX3-201ENST00000355703 MT1FP04733 61 aa5.84□□□□□ -1.47
PCNX3-201ENST00000355703 LCE2CQ5TA81 110 aa5.75□□□□□ -1.49
PCNX3-201ENST00000355703 MT4P47944 62 aa5.72□□□□□ -1.49
PCNX3-201ENST00000355703 LCE2DQ5TA82 110 aaPredicted RBP5.69□□□□□ -1.5
PCNX3-201ENST00000355703 SPRR2GQ9BYE4 73 aa5.64□□□□□ -1.51
PCNX3-201ENST00000355703 DNAH10Q8IVF4 4471 aa5.6□□□□□ -1.51
PCNX3-201ENST00000355703 DNAH1Q9P2D7 4330 aa5.6□□□□□ -1.51
PCNX3-201ENST00000355703 DNAH2Q9P225 4427 aa5.59□□□□□ -1.51
PCNX3-201ENST00000355703 LCE3EQ5T5B0 92 aa5.58□□□□□ -1.52
PCNX3-201ENST00000355703 LCE1BQ5T7P3 118 aa5.54□□□□□ -1.52
PCNX3-201ENST00000355703 LCE3DQ9BYE3 92 aa5.52□□□□□ -1.53
PCNX3-201ENST00000355703 PLECQ15149 4684 aaKnown RBP5.47□□□□□ -1.53
PCNX3-201ENST00000355703 ANK2Q01484 3957 aa5.46□□□□□ -1.53
PCNX3-201ENST00000355703 KRTAP4-8A0A0G2JLE6 195 aa5.45□□□□□ -1.54
PCNX3-201ENST00000355703 KRTAP4-8Q9BYQ9 185 aa5.45□□□□□ -1.54
PCNX3-201ENST00000355703 KRTAP19-1Q8IUB9 90 aa5.44□□□□□ -1.54
PCNX3-201ENST00000355703 DNAH11Q96DT5 4516 aa5.42□□□□□ -1.54
PCNX3-201ENST00000355703 LCE1DQ5T752 114 aa5.4□□□□□ -1.54
PCNX3-201ENST00000355703 DNAH9Q9NYC9 4486 aa5.39□□□□□ -1.55
PCNX3-201ENST00000355703 LYSTQ99698 3801 aa5.36□□□□□ -1.55
PCNX3-201ENST00000355703 VPS13BQ7Z7G8 4022 aa5.36□□□□□ -1.55
PCNX3-201ENST00000355703 DNAH8Q96JB1 4490 aa5.35□□□□□ -1.55
PCNX3-201ENST00000355703 DNAH17Q9UFH2 4485 aa5.34□□□□□ -1.56
PCNX3-201ENST00000355703 FAT2Q9NYQ8 4349 aa5.3□□□□□ -1.56
PCNX3-201ENST00000355703 STARD9Q9P2P6 4700 aa5.29□□□□□ -1.56
PCNX3-201ENST00000355703 DNHD1Q96M86 4753 aa5.28□□□□□ -1.56
PCNX3-201ENST00000355703 FRAS1Q86XX4 4008 aa5.28□□□□□ -1.56
PCNX3-201ENST00000355703 LRP1BQ9NZR2 4599 aa5.27□□□□□ -1.57
PCNX3-201ENST00000355703 LCE5AQ5TCM9 118 aa5.24□□□□□ -1.57
PCNX3-201ENST00000355703 DNAH5Q8TE73 4624 aa5.24□□□□□ -1.57
PCNX3-201ENST00000355703 FAT1Q14517 4588 aa5.23□□□□□ -1.57
PCNX3-201ENST00000355703 KMT2AQ03164 3969 aa5.22□□□□□ -1.57
PCNX3-201ENST00000355703 PRKDCP78527 4128 aaKnown RBP5.22□□□□□ -1.57
PCNX3-201ENST00000355703 VPS13DQ5THJ4 4388 aa5.2□□□□□ -1.58
PCNX3-201ENST00000355703 DNAH3Q8TD57 4116 aa5.19□□□□□ -1.58
PCNX3-201ENST00000355703 MT1XP80297 61 aa5.18□□□□□ -1.58
PCNX3-201ENST00000355703 KRTAP17-1Q9BYP8 105 aa5.18□□□□□ -1.58
PCNX3-201ENST00000355703 KRTAP4-7Q9BYR0 210 aa5.18□□□□□ -1.58
PCNX3-201ENST00000355703 MYCBP2O75592 4640 aa5.17□□□□□ -1.58
PCNX3-201ENST00000355703 DNAH7Q8WXX0 4024 aa5.16□□□□□ -1.58
PCNX3-201ENST00000355703 PRM1P04553 51 aa5.16□□□□□ -1.58
PCNX3-201ENST00000355703 LCE1CQ5T751 118 aa5.07□□□□□ -1.6
PCNX3-201ENST00000355703 LCE1EQ5T753 118 aa5.07□□□□□ -1.6
PCNX3-201ENST00000355703 LCE1FQ5T754 118 aa5.07□□□□□ -1.6
PCNX3-201ENST00000355703 LCE1AQ5T7P2 110 aa5.07□□□□□ -1.6
PCNX3-201ENST00000355703 DNAH6Q9C0G6 4158 aa5.06□□□□□ -1.6
PCNX3-201ENST00000355703 KRTAP19-4Q3LI73 84 aa5.06□□□□□ -1.6
PCNX3-201ENST00000355703 KRTAP9-2Q9BYQ4 174 aa5.05□□□□□ -1.6
PCNX3-201ENST00000355703 CMYA5Q8N3K9 4069 aa5.04□□□□□ -1.6
PCNX3-201ENST00000355703 DYNC1H1Q14204 4646 aaKnown RBP5.03□□□□□ -1.6
PCNX3-201ENST00000355703 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
PCNX3-201ENST00000355703 LOC100996750A0A140TA64 210 aa5.02□□□□□ -1.61
PCNX3-201ENST00000355703 HECTD4Q9Y4D8 3996 aa5□□□□□ -1.61
PCNX3-201ENST00000355703 MT3P25713 68 aa4.99□□□□□ -1.61
PCNX3-201ENST00000355703 KRTAP19-8Q3LI54 63 aa4.99□□□□□ -1.61
PCNX3-201ENST00000355703 MT1BP07438 61 aa4.97□□□□□ -1.61
PCNX3-201ENST00000355703 KRTAP20-1Q3LI63 56 aa4.96□□□□□ -1.62
PCNX3-201ENST00000355703 FAT3Q8TDW7 4589 aa4.95□□□□□ -1.62
PCNX3-201ENST00000355703 LRP1Q07954 4544 aaKnown RBP4.94□□□□□ -1.62
PCNX3-201ENST00000355703 KIAA1109Q2LD37 5005 aa4.93□□□□□ -1.62
PCNX3-201ENST00000355703 DYNC2H1Q8NCM8 4307 aaKnown RBP4.91□□□□□ -1.62
PCNX3-201ENST00000355703 SACSQ9NZJ4 4579 aa4.9□□□□□ -1.62
PCNX3-201ENST00000355703 KRTAP19-6Q3LI70 58 aa4.89□□□□□ -1.63
PCNX3-201ENST00000355703 KRTAP4-3Q9BYR4 195 aa4.89□□□□□ -1.63
PCNX3-201ENST00000355703 APOBP04114 4563 aaKnown RBP4.89□□□□□ -1.63
PCNX3-201ENST00000355703 PKHD1P08F94 4074 aa4.88□□□□□ -1.63
PCNX3-201ENST00000355703 KRTAP9-8Q9BYQ0 159 aa4.88□□□□□ -1.63
PCNX3-201ENST00000355703 KRTAP9-6A0A140TA67 174 aa4.87□□□□□ -1.63
PCNX3-201ENST00000355703 RYR1P21817 5038 aa4.87□□□□□ -1.63
PCNX3-201ENST00000355703 HYDINQ4G0P3 5121 aa4.85□□□□□ -1.63
PCNX3-201ENST00000355703 KRTAP4-9Q9BYQ8 210 aa4.81□□□□□ -1.64
PCNX3-201ENST00000355703 KRTAP9-3Q9BYQ3 159 aa4.8□□□□□ -1.64
PCNX3-201ENST00000355703 MT1LQ93083 61 aa4.8□□□□□ -1.64
PCNX3-201ENST00000355703 LRP2P98164 4655 aa4.77□□□□□ -1.65
PCNX3-201ENST00000355703 LPAP08519 4548 aa4.75□□□□□ -1.65
PCNX3-201ENST00000355703 RYR3Q15413 4870 aa4.73□□□□□ -1.65
PCNX3-201ENST00000355703 MT1EP04732 61 aa4.72□□□□□ -1.65
PCNX3-201ENST00000355703 PKHD1L1Q86WI1 4243 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms