RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 K7ERS5 55 aa2.96□□□□□ -1.94
CD47-201ENST00000355354 P0C880 135 aa2.95□□□□□ -1.94
CD47-201ENST00000355354 H0Y9P7 68 aa2.94□□□□□ -1.94
CD47-201ENST00000355354 COA5Q86WW8 74 aa2.93□□□□□ -1.94
CD47-201ENST00000355354 SPINK1P00995 79 aa2.93□□□□□ -1.94
CD47-201ENST00000355354 A6NN06 94 aa2.92□□□□□ -1.94
CD47-201ENST00000355354 SERP1Q9Y6X1 66 aa2.92□□□□□ -1.94
CD47-201ENST00000355354 KRTAP10-6P60371 365 aaPredicted RBP2.92□□□□□ -1.94
CD47-201ENST00000355354 KRTAP3-2Q9BYR7 98 aa2.92□□□□□ -1.94
CD47-201ENST00000355354 MACF1Q9UPN3 7388 aaKnown RBP2.91□□□□□ -1.94
CD47-201ENST00000355354 ZNF861PO60384 105 aa2.91□□□□□ -1.94
CD47-201ENST00000355354 C8orf17Q9NRJ1 99 aa2.91□□□□□ -1.94
CD47-201ENST00000355354 SPRR1BP22528 89 aa2.91□□□□□ -1.94
CD47-201ENST00000355354 PRO0628Q9UI54 55 aa2.9□□□□□ -1.94
CD47-201ENST00000355354 LOC101927531A0A1B0GV80 90 aa2.9□□□□□ -1.95
CD47-201ENST00000355354 SMIM26A0A096LP01 95 aa2.89□□□□□ -1.95
CD47-201ENST00000355354 A8MWP4 228 aa2.89□□□□□ -1.95
CD47-201ENST00000355354 IGLV7-43P04211 117 aa2.87□□□□□ -1.95
CD47-201ENST00000355354 RBM12B-AS1Q9P1G2 102 aa2.87□□□□□ -1.95
CD47-201ENST00000355354 LINC00313P59037 77 aa2.87□□□□□ -1.95
CD47-201ENST00000355354 IGKV2D-30A0A075B6S6 120 aa2.87□□□□□ -1.95
CD47-201ENST00000355354 IGKV2-30P06310 120 aa2.87□□□□□ -1.95
CD47-201ENST00000355354 SYNE2Q8WXH0 6885 aaKnown RBP2.87□□□□□ -1.95
CD47-201ENST00000355354 Q1T7F1 81 aa2.86□□□□□ -1.95
CD47-201ENST00000355354 LINC00304Q8N9R0 145 aa2.86□□□□□ -1.95
CD47-201ENST00000355354 ACYP2P14621 99 aa2.86□□□□□ -1.95
CD47-201ENST00000355354 IGLV7-46A0A075B6I9 117 aa2.85□□□□□ -1.95
CD47-201ENST00000355354 MRPL34Q9BQ48 92 aaKnown RBP2.85□□□□□ -1.95
CD47-201ENST00000355354 TPRXLQ17RH7 258 aa2.84□□□□□ -1.95
CD47-201ENST00000355354 A0A1B0GVX0 72 aa2.84□□□□□ -1.95
CD47-201ENST00000355354 ATP11AUNQ6ZP68 121 aa2.84□□□□□ -1.96
CD47-201ENST00000355354 PMAIP1Q13794 54 aa2.83□□□□□ -1.96
CD47-201ENST00000355354 LINC00483Q53H64 154 aa2.83□□□□□ -1.96
CD47-201ENST00000355354 J3QL48 77 aa2.82□□□□□ -1.96
CD47-201ENST00000355354 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
CD47-201ENST00000355354 MT1HP80294 61 aa2.81□□□□□ -1.96
CD47-201ENST00000355354 CSAG1Q6PB30 78 aa2.81□□□□□ -1.96
CD47-201ENST00000355354 SPANXA2-OT1Q8N9U9 137 aa2.81□□□□□ -1.96
CD47-201ENST00000355354 RPS29P62273 56 aaKnown RBP2.8□□□□□ -1.96
CD47-201ENST00000355354 C7orf65Q6ZTY9 151 aa2.8□□□□□ -1.96
CD47-201ENST00000355354 CRCT1Q9UGL9 99 aa2.79□□□□□ -1.96
CD47-201ENST00000355354 KRTAP12-2P59991 146 aa2.79□□□□□ -1.96
CD47-201ENST00000355354 A6NED7 52 aa2.78□□□□□ -1.97
CD47-201ENST00000355354 DMAC1Q96GE9 116 aa2.77□□□□□ -1.97
CD47-201ENST00000355354 KRTAP9-8Q9BYQ0 159 aa2.76□□□□□ -1.97
CD47-201ENST00000355354 A0A1B0GU69 56 aa2.75□□□□□ -1.97
CD47-201ENST00000355354 A0A0D9SG42 100 aa2.74□□□□□ -1.97
CD47-201ENST00000355354 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.73□□□□□ -1.97
CD47-201ENST00000355354 XP32Q5T750 250 aa2.72□□□□□ -1.97
CD47-201ENST00000355354 LINC01558Q9Y6Z2 57 aa2.72□□□□□ -1.97
CD47-201ENST00000355354 COX6B2Q6YFQ2 88 aa2.71□□□□□ -1.98
CD47-201ENST00000355354 SEC61BP60468 96 aaKnown RBP2.7□□□□□ -1.98
CD47-201ENST00000355354 Q75L30 129 aa2.7□□□□□ -1.98
CD47-201ENST00000355354 UQCR11O14957 56 aa2.68□□□□□ -1.98
CD47-201ENST00000355354 A8MUU9 505 aa2.67□□□□□ -1.98
CD47-201ENST00000355354 LCE2BO14633 110 aa2.67□□□□□ -1.98
CD47-201ENST00000355354 KRTAP9-3Q9BYQ3 159 aa2.67□□□□□ -1.98
CD47-201ENST00000355354 CDC42SE1Q9NRR8 79 aa2.63□□□□□ -1.99
CD47-201ENST00000355354 KRTAP12-1P59990 96 aa2.63□□□□□ -1.99
CD47-201ENST00000355354 KRTAP9-7A8MTY7 169 aa2.61□□□□□ -1.99
CD47-201ENST00000355354 MIR22HGQ0VDD5 57 aa2.61□□□□□ -1.99
CD47-201ENST00000355354 KRTAP19-6Q3LI70 58 aa2.61□□□□□ -1.99
CD47-201ENST00000355354 KTN1-AS1Q86SY8 53 aa2.61□□□□□ -1.99
CD47-201ENST00000355354 S4R3F8 94 aa2.6□□□□□ -1.99
CD47-201ENST00000355354 C20orf166-AS1Q96NR2 134 aa2.58□□□□□ -2
CD47-201ENST00000355354 KRTAP4-7Q9BYR0 210 aa2.57□□□□□ -2
CD47-201ENST00000355354 KRTAP19-1Q8IUB9 90 aa2.56□□□□□ -2
CD47-201ENST00000355354 LINC01554Q52M75 96 aa2.55□□□□□ -2
CD47-201ENST00000355354 MT2AP02795 61 aa2.55□□□□□ -2
CD47-201ENST00000355354 MT1FP04733 61 aa2.55□□□□□ -2
CD47-201ENST00000355354 KRTAP4-8A0A0G2JLE6 195 aa2.54□□□□□ -2
CD47-201ENST00000355354 KRTAP4-8Q9BYQ9 185 aa2.54□□□□□ -2
CD47-201ENST00000355354 A0A1B0GU33 70 aa2.54□□□□□ -2
CD47-201ENST00000355354 RPL37P61927 97 aaKnown RBP2.54□□□□□ -2
CD47-201ENST00000355354 H3BS24 57 aa2.53□□□□□ -2
CD47-201ENST00000355354 KRTAP5-9P26371 169 aa2.53□□□□□ -2
CD47-201ENST00000355354 ROMO1P60602 79 aa2.52□□□□□ -2.01
CD47-201ENST00000355354 H1FX-AS1Q4G0G2 97 aa2.52□□□□□ -2.01
CD47-201ENST00000355354 KRTAP9-6A8MVA2 160 aa2.51□□□□□ -2.01
CD47-201ENST00000355354 NEBP20929 6669 aa2.5□□□□□ -2.01
CD47-201ENST00000355354 KRTAP6-3Q3LI67 103 aa2.5□□□□□ -2.01
CD47-201ENST00000355354 NDUFAF8A1L188 74 aa2.49□□□□□ -2.01
CD47-201ENST00000355354 M0QZ58 72 aa2.49□□□□□ -2.01
CD47-201ENST00000355354 M0R2T5 61 aa2.48□□□□□ -2.01
CD47-201ENST00000355354 KRTAP15-1Q3LI76 137 aa2.46□□□□□ -2.02
CD47-201ENST00000355354 CAMK2N1Q7Z7J9 78 aa2.46□□□□□ -2.02
CD47-201ENST00000355354 R4GN34 69 aa2.46□□□□□ -2.02
CD47-201ENST00000355354 SPINT4Q6UDR6 99 aa2.45□□□□□ -2.02
CD47-201ENST00000355354 KRTAP25-1Q3LHN0 102 aa2.44□□□□□ -2.02
CD47-201ENST00000355354 PLAC4Q8WY50 150 aa2.44□□□□□ -2.02
CD47-201ENST00000355354 KRTAP10-7P60409 375 aaPredicted RBP2.41□□□□□ -2.02
CD47-201ENST00000355354 KRTAP4-3Q9BYR4 195 aa2.4□□□□□ -2.03
CD47-201ENST00000355354 LUZP6Q538Z0 58 aa2.38□□□□□ -2.03
CD47-201ENST00000355354 MT1BP07438 61 aa2.37□□□□□ -2.03
CD47-201ENST00000355354 KRTAP19-8Q3LI54 63 aa2.36□□□□□ -2.03
CD47-201ENST00000355354 PP632Q6XCG6 107 aa2.35□□□□□ -2.03
CD47-201ENST00000355354 LOC100996750A0A140TA64 210 aa2.33□□□□□ -2.04
CD47-201ENST00000355354 KRTAP10-5P60370 271 aa2.31□□□□□ -2.04
CD47-201ENST00000355354 MT1XP80297 61 aa2.3□□□□□ -2.04
CD47-201ENST00000355354 TNP1P09430 55 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms