RNA–Protein interactions for RNA: ENST00000354764.8

PGAP1-201, Transcript of post-GPI attachment to proteins 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGAP1, Length 11,114 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-201ENST00000354764 FBN3Q75N90 2809 aa3.57□□□□□ -1.84
PGAP1-201ENST00000354764 ZNF469Q96JG9 3925 aaPredicted RBP3.56□□□□□ -1.84
PGAP1-201ENST00000354764 DNAH6Q9C0G6 4158 aa3.49□□□□□ -1.85
PGAP1-201ENST00000354764 KRTAP23-1A1A580 65 aa3.49□□□□□ -1.85
PGAP1-201ENST00000354764 LRP1BQ9NZR2 4599 aa3.49□□□□□ -1.85
PGAP1-201ENST00000354764 DNAH5Q8TE73 4624 aa3.48□□□□□ -1.85
PGAP1-201ENST00000354764 M0R2T5 61 aa3.47□□□□□ -1.85
PGAP1-201ENST00000354764 DYNC1H1Q14204 4646 aaKnown RBP3.47□□□□□ -1.85
PGAP1-201ENST00000354764 MT1HL1P0DM35 61 aa3.45□□□□□ -1.86
PGAP1-201ENST00000354764 CMYA5Q8N3K9 4069 aa3.41□□□□□ -1.86
PGAP1-201ENST00000354764 STARD9Q9P2P6 4700 aa3.41□□□□□ -1.86
PGAP1-201ENST00000354764 COL7A1Q02388 2944 aa3.38□□□□□ -1.87
PGAP1-201ENST00000354764 APOBP04114 4563 aaKnown RBP3.38□□□□□ -1.87
PGAP1-201ENST00000354764 INE1O15225 51 aa3.36□□□□□ -1.87
PGAP1-201ENST00000354764 ANK2Q01484 3957 aa3.34□□□□□ -1.87
PGAP1-201ENST00000354764 CSMD3Q7Z407 3707 aa3.34□□□□□ -1.87
PGAP1-201ENST00000354764 PRO2289Q9P1D8 64 aa3.33□□□□□ -1.88
PGAP1-201ENST00000354764 HECTD4Q9Y4D8 3996 aa3.31□□□□□ -1.88
PGAP1-201ENST00000354764 DNAH7Q8WXX0 4024 aa3.31□□□□□ -1.88
PGAP1-201ENST00000354764 FAT3Q8TDW7 4589 aa3.31□□□□□ -1.88
PGAP1-201ENST00000354764 FAT1Q14517 4588 aa3.31□□□□□ -1.88
PGAP1-201ENST00000354764 FAT2Q9NYQ8 4349 aa3.3□□□□□ -1.88
PGAP1-201ENST00000354764 LORP23490 312 aaPredicted RBP3.29□□□□□ -1.88
PGAP1-201ENST00000354764 PRKDCP78527 4128 aaKnown RBP3.29□□□□□ -1.88
PGAP1-201ENST00000354764 MYCBP2O75592 4640 aa3.25□□□□□ -1.89
PGAP1-201ENST00000354764 KRTAP10-10P60014 251 aa3.24□□□□□ -1.89
PGAP1-201ENST00000354764 PKHD1L1Q86WI1 4243 aa3.23□□□□□ -1.89
PGAP1-201ENST00000354764 VPS13BQ7Z7G8 4022 aa3.22□□□□□ -1.89
PGAP1-201ENST00000354764 HSPG2P98160 4391 aa3.21□□□□□ -1.9
PGAP1-201ENST00000354764 LRP1Q07954 4544 aaKnown RBP3.21□□□□□ -1.9
PGAP1-201ENST00000354764 FRAS1Q86XX4 4008 aa3.19□□□□□ -1.9
PGAP1-201ENST00000354764 RYR2Q92736 4967 aa3.18□□□□□ -1.9
PGAP1-201ENST00000354764 SPRR5A0A1B0GTR4 108 aa3.16□□□□□ -1.9
PGAP1-201ENST00000354764 KMT2AQ03164 3969 aa3.16□□□□□ -1.9
PGAP1-201ENST00000354764 LYSTQ99698 3801 aa3.15□□□□□ -1.9
PGAP1-201ENST00000354764 DNHD1Q96M86 4753 aa3.15□□□□□ -1.91
PGAP1-201ENST00000354764 RYR1P21817 5038 aa3.14□□□□□ -1.91
PGAP1-201ENST00000354764 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
PGAP1-201ENST00000354764 KRTAP4-1Q9BYQ7 146 aa3.13□□□□□ -1.91
PGAP1-201ENST00000354764 PKD1P98161 4303 aa3.12□□□□□ -1.91
PGAP1-201ENST00000354764 KRTAP12-3P60328 96 aa3.1□□□□□ -1.91
PGAP1-201ENST00000354764 KRTAP10-12P60413 245 aa3.09□□□□□ -1.91
PGAP1-201ENST00000354764 HERC1Q15751 4861 aa3.09□□□□□ -1.91
PGAP1-201ENST00000354764 SPRR2GQ9BYE4 73 aa3.09□□□□□ -1.92
PGAP1-201ENST00000354764 HYDINQ4G0P3 5121 aa3.07□□□□□ -1.92
PGAP1-201ENST00000354764 TNXBP22105 4242 aa3.07□□□□□ -1.92
PGAP1-201ENST00000354764 PKHD1P08F94 4074 aa3.06□□□□□ -1.92
PGAP1-201ENST00000354764 KRTAP8-1Q8IUC2 63 aa3.06□□□□□ -1.92
PGAP1-201ENST00000354764 KRTAP4-5Q9BYR2 181 aa3.06□□□□□ -1.92
PGAP1-201ENST00000354764 RYR3Q15413 4870 aa2.99□□□□□ -1.93
PGAP1-201ENST00000354764 KRTAP17-1Q9BYP8 105 aa2.97□□□□□ -1.93
PGAP1-201ENST00000354764 KIAA1109Q2LD37 5005 aa2.96□□□□□ -1.94
PGAP1-201ENST00000354764 KRTAP19-2Q3LHN2 52 aa2.94□□□□□ -1.94
PGAP1-201ENST00000354764 KRTAP19-8Q3LI54 63 aa2.94□□□□□ -1.94
PGAP1-201ENST00000354764 KRTAP19-1Q8IUB9 90 aa2.93□□□□□ -1.94
PGAP1-201ENST00000354764 MT2AP02795 61 aa2.93□□□□□ -1.94
PGAP1-201ENST00000354764 KRTAP19-4Q3LI73 84 aa2.91□□□□□ -1.94
PGAP1-201ENST00000354764 MUC17Q685J3 4493 aa2.91□□□□□ -1.94
PGAP1-201ENST00000354764 MT1HP80294 61 aa2.9□□□□□ -1.95
PGAP1-201ENST00000354764 LRP2P98164 4655 aa2.9□□□□□ -1.95
PGAP1-201ENST00000354764 MT1FP04733 61 aa2.88□□□□□ -1.95
PGAP1-201ENST00000354764 KMT2CQ8NEZ4 4911 aaKnown RBP2.86□□□□□ -1.95
PGAP1-201ENST00000354764 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.96
PGAP1-201ENST00000354764 MT1XP80297 61 aa2.81□□□□□ -1.96
PGAP1-201ENST00000354764 HERC2O95714 4834 aa2.81□□□□□ -1.96
PGAP1-201ENST00000354764 KRTAP10-5P60370 271 aa2.8□□□□□ -1.96
PGAP1-201ENST00000354764 LCE2CQ5TA81 110 aa2.8□□□□□ -1.96
PGAP1-201ENST00000354764 BIRC6Q9NR09 4857 aa2.79□□□□□ -1.96
PGAP1-201ENST00000354764 MT1BP07438 61 aa2.79□□□□□ -1.96
PGAP1-201ENST00000354764 KRTAP19-5Q3LI72 72 aa2.78□□□□□ -1.96
PGAP1-201ENST00000354764 FLGP20930 4061 aaPredicted RBP2.77□□□□□ -1.97
PGAP1-201ENST00000354764 KRTAP9-8Q9BYQ0 159 aa2.74□□□□□ -1.97
PGAP1-201ENST00000354764 KRTAP10-7P60409 375 aaPredicted RBP2.74□□□□□ -1.97
PGAP1-201ENST00000354764 LPAP08519 4548 aa2.72□□□□□ -1.97
PGAP1-201ENST00000354764 KRTAP9-3Q9BYQ3 159 aa2.66□□□□□ -1.98
PGAP1-201ENST00000354764 ABCA13Q86UQ4 5058 aa2.62□□□□□ -1.99
PGAP1-201ENST00000354764 EPPK1P58107 5090 aaKnown RBP2.58□□□□□ -2
PGAP1-201ENST00000354764 KRTAP2-3P0C7H8 128 aa2.56□□□□□ -2
PGAP1-201ENST00000354764 KRTAP2-4Q9BYR9 128 aa2.56□□□□□ -2
PGAP1-201ENST00000354764 KRTAP2-1Q9BYU5 128 aa2.56□□□□□ -2
PGAP1-201ENST00000354764 PCLOQ9Y6V0 5065 aa2.55□□□□□ -2
PGAP1-201ENST00000354764 CRCT1Q9UGL9 99 aa2.55□□□□□ -2
PGAP1-201ENST00000354764 RNF213Q63HN8 5207 aa2.53□□□□□ -2
PGAP1-201ENST00000354764 HMCN2Q8NDA2 5059 aa2.53□□□□□ -2
PGAP1-201ENST00000354764 MT1LQ93083 61 aa2.51□□□□□ -2.01
PGAP1-201ENST00000354764 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
PGAP1-201ENST00000354764 KRTAP4-8A0A0G2JLE6 195 aa2.49□□□□□ -2.01
PGAP1-201ENST00000354764 KRTAP4-8Q9BYQ9 185 aa2.49□□□□□ -2.01
PGAP1-201ENST00000354764 MT1EP04732 61 aa2.48□□□□□ -2.01
PGAP1-201ENST00000354764 FAT4Q6V0I7 4981 aa2.47□□□□□ -2.01
PGAP1-201ENST00000354764 LCE2BO14633 110 aa2.47□□□□□ -2.01
PGAP1-201ENST00000354764 MT1GP13640 62 aa2.45□□□□□ -2.02
PGAP1-201ENST00000354764 KRTAP19-7Q3SYF9 63 aa2.45□□□□□ -2.02
PGAP1-201ENST00000354764 KRTAP4-7Q9BYR0 210 aa2.42□□□□□ -2.02
PGAP1-201ENST00000354764 KRTAP9-6A8MVA2 160 aa2.4□□□□□ -2.02
PGAP1-201ENST00000354764 KRTAP19-3Q7Z4W3 81 aa2.38□□□□□ -2.03
PGAP1-201ENST00000354764 UBR4Q5T4S7 5183 aa2.37□□□□□ -2.03
PGAP1-201ENST00000354764 MUC2Q02817 5179 aa2.36□□□□□ -2.03
PGAP1-201ENST00000354764 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
PGAP1-201ENST00000354764 MT1MQ8N339 61 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms